RNA–Protein interactions for RNA: ENST00000408909.6

TRPM3-215, Transcript of transient receptor potential cation channel subfamily M member 3, human

APPRIS ALT2 TSL 5 BASIC

Gene TRPM3, Length 4,701 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPM3-215	ENST00000408909	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.99	□□□□□ -0.49
TRPM3-215	ENST00000408909	CSPP1	Q1MSJ5	1256 aa		11.98	□□□□□ -0.49
TRPM3-215	ENST00000408909	TPM3	P06753	285 aa		11.98	□□□□□ -0.49
TRPM3-215	ENST00000408909	KIAA1211	Q6ZU35	1233 aa		11.98	□□□□□ -0.49
TRPM3-215	ENST00000408909	PRM3	Q9NNZ6	103 aa		11.98	□□□□□ -0.49
TRPM3-215	ENST00000408909	GPS2	Q13227	327 aa		11.96	□□□□□ -0.5
TRPM3-215	ENST00000408909	HDAC5	Q9UQL6	1122 aa		11.95	□□□□□ -0.5
TRPM3-215	ENST00000408909	PLPPR3	Q6T4P5	718 aa		11.95	□□□□□ -0.5
TRPM3-215	ENST00000408909	SOGA1	O94964	1423 aa		11.95	□□□□□ -0.5
TRPM3-215	ENST00000408909	CHIC2	Q9UKJ5	165 aa		11.94	□□□□□ -0.5
TRPM3-215	ENST00000408909	MTUS2	Q5JR59	1369 aa		11.94	□□□□□ -0.5
TRPM3-215	ENST00000408909	FRAT1	Q92837	279 aa	Predicted RBP	11.94	□□□□□ -0.5
TRPM3-215	ENST00000408909	HIRIP3	Q9BW71	556 aa	Predicted RBP	11.93	□□□□□ -0.5
TRPM3-215	ENST00000408909	CHMP4C	Q96CF2	233 aa		11.92	□□□□□ -0.5
TRPM3-215	ENST00000408909	KCNH8	Q96L42	1107 aa		11.92	□□□□□ -0.5
TRPM3-215	ENST00000408909	KIF3A	Q9Y496	699 aa		11.92	□□□□□ -0.5
TRPM3-215	ENST00000408909	CCNB3	Q8WWL7	1395 aa		11.92	□□□□□ -0.5
TRPM3-215	ENST00000408909	IPO8	O15397	1037 aa	Known RBP	11.92	□□□□□ -0.5
TRPM3-215	ENST00000408909	GSE1	Q14687	1217 aa		11.91	□□□□□ -0.5
TRPM3-215	ENST00000408909	DHX57	Q6P158	1386 aa	Known RBP	11.91	□□□□□ -0.5
TRPM3-215	ENST00000408909	PHF14	O94880	888 aa		11.91	□□□□□ -0.5
TRPM3-215	ENST00000408909	TAOK2	Q9UL54	1235 aa		11.91	□□□□□ -0.5
TRPM3-215	ENST00000408909	GOLGA6L3	A6NEY3	463 aa		11.91	□□□□□ -0.5
TRPM3-215	ENST00000408909	CCDC70	Q6NSX1	233 aa		11.9	□□□□□ -0.5
TRPM3-215	ENST00000408909	ISY1	Q9ULR0	285 aa	Known RBP	11.9	□□□□□ -0.5
TRPM3-215	ENST00000408909	CCDC88B	A6NC98	1476 aa		11.88	□□□□□ -0.51
TRPM3-215	ENST00000408909	CALD1	Q05682	793 aa	Known RBP	11.88	□□□□□ -0.51
TRPM3-215	ENST00000408909	NEUROD2	Q15784	382 aa		11.88	□□□□□ -0.51
TRPM3-215	ENST00000408909	RRP12	Q5JTH9	1297 aa	Known RBP	11.88	□□□□□ -0.51
TRPM3-215	ENST00000408909	PAK3	O75914	559 aa	Predicted RBP	11.88	□□□□□ -0.51
TRPM3-215	ENST00000408909	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.87	□□□□□ -0.51
TRPM3-215	ENST00000408909	TSR1	Q2NL82	804 aa	Known RBP	11.87	□□□□□ -0.51
TRPM3-215	ENST00000408909	TCERG1	O14776	1098 aa	Known RBP	11.87	□□□□□ -0.51
TRPM3-215	ENST00000408909	ZMYND15	Q9H091	742 aa		11.86	□□□□□ -0.51
TRPM3-215	ENST00000408909	BRPF3	Q9ULD4	1205 aa		11.86	□□□□□ -0.51
TRPM3-215	ENST00000408909	CECR2	Q9BXF3	1484 aa		11.86	□□□□□ -0.51
TRPM3-215	ENST00000408909	HMMR	O75330	724 aa		11.85	□□□□□ -0.51
TRPM3-215	ENST00000408909	SIN3A	Q96ST3	1273 aa		11.85	□□□□□ -0.51
TRPM3-215	ENST00000408909	CARD11	Q9BXL7	1154 aa		11.85	□□□□□ -0.51
TRPM3-215	ENST00000408909	CDR1	P51861	262 aa		11.85	□□□□□ -0.51
TRPM3-215	ENST00000408909	SETD5	Q9C0A6	1442 aa		11.84	□□□□□ -0.51
TRPM3-215	ENST00000408909	POGK	Q9P215	609 aa		11.84	□□□□□ -0.51
TRPM3-215	ENST00000408909	TPM1	P09493	284 aa		11.84	□□□□□ -0.51
TRPM3-215	ENST00000408909	RWDD1	Q9H446	243 aa	Predicted RBP	11.84	□□□□□ -0.51
TRPM3-215	ENST00000408909	MROH2B	Q7Z745	1585 aa		11.83	□□□□□ -0.52
TRPM3-215	ENST00000408909	PLEKHG5	O94827	1062 aa		11.83	□□□□□ -0.52
TRPM3-215	ENST00000408909	FAM43A	Q8N2R8	423 aa		11.83	□□□□□ -0.52
TRPM3-215	ENST00000408909	ABCC8	Q09428	1581 aa		11.82	□□□□□ -0.52
TRPM3-215	ENST00000408909	TEX35	Q5T0J7	233 aa		11.82	□□□□□ -0.52
TRPM3-215	ENST00000408909	RASSF8	Q8NHQ8	419 aa		11.82	□□□□□ -0.52
TRPM3-215	ENST00000408909	TMX4	Q9H1E5	349 aa	Predicted RBP	11.82	□□□□□ -0.52
TRPM3-215	ENST00000408909	NACAD	O15069	1562 aa		11.82	□□□□□ -0.52
TRPM3-215	ENST00000408909	HDGF	P51858	240 aa	Known RBP	11.82	□□□□□ -0.52
TRPM3-215	ENST00000408909	U2SURP	O15042	1029 aa	Known RBP	11.81	□□□□□ -0.52
TRPM3-215	ENST00000408909	GPATCH3	Q96I76	525 aa		11.81	□□□□□ -0.52
TRPM3-215	ENST00000408909	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.81	□□□□□ -0.52
TRPM3-215	ENST00000408909	IPO7	O95373	1038 aa	Known RBP	11.8	□□□□□ -0.52
TRPM3-215	ENST00000408909	PLEKHD1	A6NEE1	506 aa		11.8	□□□□□ -0.52
TRPM3-215	ENST00000408909	RTF1	Q92541	710 aa	Known RBP	11.8	□□□□□ -0.52
TRPM3-215	ENST00000408909	ATP6V1D	Q9Y5K8	247 aa		11.8	□□□□□ -0.52
TRPM3-215	ENST00000408909	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.79	□□□□□ -0.52
TRPM3-215	ENST00000408909	RAB3GAP2	Q9H2M9	1393 aa		11.79	□□□□□ -0.52
TRPM3-215	ENST00000408909	RGL3	Q3MIN7	710 aa		11.79	□□□□□ -0.52
TRPM3-215	ENST00000408909	TPM2	P07951	284 aa		11.79	□□□□□ -0.52
TRPM3-215	ENST00000408909	NOM1	Q5C9Z4	860 aa	Known RBP	11.78	□□□□□ -0.52
TRPM3-215	ENST00000408909	LMOD2	Q6P5Q4	547 aa		11.78	□□□□□ -0.52
TRPM3-215	ENST00000408909	RRP9	O43818	475 aa	Known RBP	11.77	□□□□□ -0.52
TRPM3-215	ENST00000408909	TMF1	P82094	1093 aa		11.77	□□□□□ -0.52
TRPM3-215	ENST00000408909	ACBD3	Q9H3P7	528 aa		11.77	□□□□□ -0.53
TRPM3-215	ENST00000408909	SF3A1	Q15459	793 aa	Known RBP	11.77	□□□□□ -0.53
TRPM3-215	ENST00000408909	PMFBP1	Q8TBY8	1022 aa		11.77	□□□□□ -0.53
TRPM3-215	ENST00000408909	DDX11L8	A8MPP1	907 aa		11.76	□□□□□ -0.53
TRPM3-215	ENST00000408909	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.76	□□□□□ -0.53
TRPM3-215	ENST00000408909	GORAB	Q5T7V8	394 aa		11.75	□□□□□ -0.53
TRPM3-215	ENST00000408909	GOLGA6L19	H0YKK7	550 aa		11.75	□□□□□ -0.53
TRPM3-215	ENST00000408909	ST18	O60284	1047 aa		11.75	□□□□□ -0.53
TRPM3-215	ENST00000408909	HSP90B1	P14625	803 aa	Known RBP	11.75	□□□□□ -0.53
TRPM3-215	ENST00000408909	C11orf95	C9JLR9	678 aa	Predicted RBP	11.74	□□□□□ -0.53
TRPM3-215	ENST00000408909	CCDC191	Q8NCU4	936 aa		11.74	□□□□□ -0.53
TRPM3-215	ENST00000408909	GZF1	Q9H116	711 aa	Predicted RBP	11.74	□□□□□ -0.53
TRPM3-215	ENST00000408909	MARCH6	O60337	910 aa		11.74	□□□□□ -0.53
TRPM3-215	ENST00000408909	ARID3A	Q99856	593 aa		11.74	□□□□□ -0.53
TRPM3-215	ENST00000408909	TPD52L1	Q16890	204 aa	Predicted RBP	11.74	□□□□□ -0.53
TRPM3-215	ENST00000408909	ANKRD20A12P	Q8NF67	263 aa		11.74	□□□□□ -0.53
TRPM3-215	ENST00000408909	RRP7BP	Q9NSQ0	103 aa		11.74	□□□□□ -0.53
TRPM3-215	ENST00000408909	KANK4	Q5T7N3	995 aa	Predicted RBP	11.74	□□□□□ -0.53
TRPM3-215	ENST00000408909	KIF16B	Q96L93	1317 aa		11.73	□□□□□ -0.53
TRPM3-215	ENST00000408909	BECN2	A8MW95	431 aa		11.73	□□□□□ -0.53
TRPM3-215	ENST00000408909	DCTN1	Q14203	1278 aa		11.73	□□□□□ -0.53
TRPM3-215	ENST00000408909	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.73	□□□□□ -0.53
TRPM3-215	ENST00000408909	CCDC47	Q96A33	483 aa	Known RBP	11.73	□□□□□ -0.53
TRPM3-215	ENST00000408909	TOP2A	P11388	1531 aa	Known RBP	11.72	□□□□□ -0.53
TRPM3-215	ENST00000408909	WIZ	O95785	1651 aa		11.72	□□□□□ -0.53
TRPM3-215	ENST00000408909	KIF27	Q86VH2	1401 aa		11.72	□□□□□ -0.53
TRPM3-215	ENST00000408909	PDE4C	Q08493	712 aa		11.72	□□□□□ -0.53
TRPM3-215	ENST00000408909	SPRYD3	Q8NCJ5	442 aa		11.72	□□□□□ -0.53
TRPM3-215	ENST00000408909	SLK	Q9H2G2	1235 aa	Predicted RBP	11.72	□□□□□ -0.53
TRPM3-215	ENST00000408909	CPLX2	Q6PUV4	134 aa	Known RBP	11.72	□□□□□ -0.53
TRPM3-215	ENST00000408909	STK31	Q9BXU1	1019 aa		11.71	□□□□□ -0.54
TRPM3-215	ENST00000408909	MTERF4	Q7Z6M4	381 aa	Known RBP	11.71	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms