RNA–Protein interactions for RNA: ENST00000407404.5

NR1H3-204, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5 BASIC

Gene NR1H3, Length 1,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-204ENST00000407404 RAPGEF3O95398 923 aa26.34■■□□□ 1.81
NR1H3-204ENST00000407404 DENND4BO75064 1496 aaPredicted RBP26.33■■□□□ 1.81
NR1H3-204ENST00000407404 APLP2Q06481 763 aa26.33■■□□□ 1.81
NR1H3-204ENST00000407404 ADGRL1O94910 1474 aa26.33■■□□□ 1.8
NR1H3-204ENST00000407404 CCNB3Q8WWL7 1395 aa26.31■■□□□ 1.8
NR1H3-204ENST00000407404 LRRC9Q6ZRR7 1453 aa26.31■■□□□ 1.8
NR1H3-204ENST00000407404 GPATCH8Q9UKJ3 1502 aaKnown RBP26.31■■□□□ 1.8
NR1H3-204ENST00000407404 SCAPERQ9BY12 1400 aa26.3■■□□□ 1.8
NR1H3-204ENST00000407404 FRMPD1Q5SYB0 1578 aa26.29■■□□□ 1.8
NR1H3-204ENST00000407404 SUPT6HQ7KZ85 1726 aaKnown RBP26.29■■□□□ 1.8
NR1H3-204ENST00000407404 RICTORQ6R327 1708 aa26.28■■□□□ 1.8
NR1H3-204ENST00000407404 KANK4Q5T7N3 995 aaPredicted RBP26.26■■□□□ 1.79
NR1H3-204ENST00000407404 NCOA2Q15596 1464 aa26.25■■□□□ 1.79
NR1H3-204ENST00000407404 CFDP1Q9UEE9 299 aaPredicted RBP26.24■■□□□ 1.79
NR1H3-204ENST00000407404 POGZQ7Z3K3 1410 aa26.23■■□□□ 1.79
NR1H3-204ENST00000407404 ITSN2Q9NZM3 1697 aa26.22■■□□□ 1.79
NR1H3-204ENST00000407404 ZNF777Q9ULD5 760 aaPredicted RBP26.22■■□□□ 1.79
NR1H3-204ENST00000407404 ABCC1P33527 1531 aa26.2■■□□□ 1.78
NR1H3-204ENST00000407404 ZMYM4Q5VZL5 1548 aa26.19■■□□□ 1.78
NR1H3-204ENST00000407404 SAMD9LQ8IVG5 1584 aa26.18■■□□□ 1.78
NR1H3-204ENST00000407404 ZNF518AQ6AHZ1 1483 aa26.17■■□□□ 1.78
NR1H3-204ENST00000407404 ARHGEF12Q9NZN5 1544 aa26.15■■□□□ 1.78
NR1H3-204ENST00000407404 MAGI2Q86UL8 1455 aa26.14■■□□□ 1.78
NR1H3-204ENST00000407404 AFAP1Q8N556 730 aa26.14■■□□□ 1.77
NR1H3-204ENST00000407404 PLEKHH2Q8IVE3 1493 aa26.13■■□□□ 1.77
NR1H3-204ENST00000407404 ZFYVE16Q7Z3T8 1539 aa26.11■■□□□ 1.77
NR1H3-204ENST00000407404 TRAPPC8Q9Y2L5 1435 aa26.11■■□□□ 1.77
NR1H3-204ENST00000407404 KDM5CP41229 1560 aa26.11■■□□□ 1.77
NR1H3-204ENST00000407404 ARHGEF40Q8TER5 1519 aa26.11■■□□□ 1.77
NR1H3-204ENST00000407404 SYCP2Q9BX26 1530 aa26.11■■□□□ 1.77
NR1H3-204ENST00000407404 KIAA1107Q9UPP5 1409 aa26.1■■□□□ 1.77
NR1H3-204ENST00000407404 HNRNPMP52272 730 aaKnown RBP eCLIP26.09■■□□□ 1.77
NR1H3-204ENST00000407404 ZNF644Q9H582 1327 aaPredicted RBP26.08■■□□□ 1.77
NR1H3-204ENST00000407404 YEATS2Q9ULM3 1422 aa26.08■■□□□ 1.77
NR1H3-204ENST00000407404 MYT1LQ9UL68 1186 aa26.07■■□□□ 1.76
NR1H3-204ENST00000407404 HECW2Q9P2P5 1572 aa26.06■■□□□ 1.76
NR1H3-204ENST00000407404 MYOM3Q5VTT5 1437 aa26.05■■□□□ 1.76
NR1H3-204ENST00000407404 MLH3Q9UHC1 1453 aa26.04■■□□□ 1.76
NR1H3-204ENST00000407404 KDM4FA0A1W2PPD8 638 aa26.03■■□□□ 1.76
NR1H3-204ENST00000407404 CAMSAP2Q08AD1 1489 aa26.03■■□□□ 1.76
NR1H3-204ENST00000407404 MIA2Q96PC5 1412 aa26.01■■□□□ 1.75
NR1H3-204ENST00000407404 ATP10AO60312 1499 aa26■■□□□ 1.75
NR1H3-204ENST00000407404 MBD5Q9P267 1494 aa25.99■■□□□ 1.75
NR1H3-204ENST00000407404 SPAG9O60271 1321 aaKnown RBP25.98■■□□□ 1.75
NR1H3-204ENST00000407404 ARID4BQ4LE39 1312 aaPredicted RBP25.98■■□□□ 1.75
NR1H3-204ENST00000407404 AEBP2Q6ZN18 517 aaPredicted RBP25.97■■□□□ 1.75
NR1H3-204ENST00000407404 KIDINS220Q9ULH0 1771 aa25.96■■□□□ 1.75
NR1H3-204ENST00000407404 C9orf84Q5VXU9 1444 aa25.96■■□□□ 1.75
NR1H3-204ENST00000407404 DIP2CQ9Y2E4 1556 aa25.96■■□□□ 1.75
NR1H3-204ENST00000407404 RSPH4AQ5TD94 716 aa25.95■■□□□ 1.75
NR1H3-204ENST00000407404 ABCA6Q8N139 1617 aa25.95■■□□□ 1.74
NR1H3-204ENST00000407404 ATP7AQ04656 1500 aa25.92■■□□□ 1.74
NR1H3-204ENST00000407404 CCDC141Q6ZP82 1450 aa25.92■■□□□ 1.74
NR1H3-204ENST00000407404 ARHGEF5Q12774 1597 aa25.92■■□□□ 1.74
NR1H3-204ENST00000407404 INO80Q9ULG1 1556 aaPredicted RBP25.92■■□□□ 1.74
NR1H3-204ENST00000407404 SIGLEC1Q9BZZ2 1709 aa25.91■■□□□ 1.74
NR1H3-204ENST00000407404 FGD6Q6ZV73 1430 aa25.9■■□□□ 1.74
NR1H3-204ENST00000407404 BCORL1Q5H9F3 1711 aa25.9■■□□□ 1.74
NR1H3-204ENST00000407404 REREQ9P2R6 1566 aa25.89■■□□□ 1.74
NR1H3-204ENST00000407404 PTPN23Q9H3S7 1636 aa25.89■■□□□ 1.73
NR1H3-204ENST00000407404 RTEL1-TNFRSF6BF6WH68 1400 aa25.86■■□□□ 1.73
NR1H3-204ENST00000407404 ADAMTSL3P82987 1691 aa25.86■■□□□ 1.73
NR1H3-204ENST00000407404 PPARGC1BQ86YN6 1023 aaKnown RBP25.86■■□□□ 1.73
NR1H3-204ENST00000407404 TSPY4P0CV99 314 aa25.85■■□□□ 1.73
NR1H3-204ENST00000407404 TSPY10P0CW01 314 aa25.85■■□□□ 1.73
NR1H3-204ENST00000407404 TCOF1Q13428 1488 aaKnown RBP25.84■■□□□ 1.73
NR1H3-204ENST00000407404 MLECQ14165 292 aa25.82■■□□□ 1.72
NR1H3-204ENST00000407404 AGLP35573 1532 aa25.81■■□□□ 1.72
NR1H3-204ENST00000407404 ADGBQ8N7X0 1667 aa25.8■■□□□ 1.72
NR1H3-204ENST00000407404 A2MP01023 1474 aa25.79■■□□□ 1.72
NR1H3-204ENST00000407404 MADDQ8WXG6 1647 aa25.78■■□□□ 1.72
NR1H3-204ENST00000407404 MAST1Q9Y2H9 1570 aa25.78■■□□□ 1.72
NR1H3-204ENST00000407404 FAM50AQ14320 339 aaKnown RBP25.75■■□□□ 1.71
NR1H3-204ENST00000407404 DNMT1P26358 1616 aaKnown RBP25.75■■□□□ 1.71
NR1H3-204ENST00000407404 PLXNC1O60486 1568 aa25.75■■□□□ 1.71
NR1H3-204ENST00000407404 ABCC5O15440 1437 aa25.74■■□□□ 1.71
NR1H3-204ENST00000407404 DAPK1P53355 1430 aa25.73■■□□□ 1.71
NR1H3-204ENST00000407404 CROCC2H7BZ55 1655 aa25.73■■□□□ 1.71
NR1H3-204ENST00000407404 RIMS1Q86UR5 1692 aaKnown RBP25.72■■□□□ 1.71
NR1H3-204ENST00000407404 DHX29Q7Z478 1369 aaKnown RBP25.72■■□□□ 1.71
NR1H3-204ENST00000407404 FER1L4A9Z1Z3 1794 aa25.71■■□□□ 1.71
NR1H3-204ENST00000407404 PTPRMP28827 1452 aa25.71■■□□□ 1.71
NR1H3-204ENST00000407404 SHANK2Q9UPX8 1470 aa25.71■■□□□ 1.71
NR1H3-204ENST00000407404 ESF1Q9H501 851 aaKnown RBP25.64■■□□□ 1.7
NR1H3-204ENST00000407404 GGT6Q6P531 493 aa25.62■■□□□ 1.69
NR1H3-204ENST00000407404 CHIC2Q9UKJ5 165 aa25.62■■□□□ 1.69
NR1H3-204ENST00000407404 KIF3BO15066 747 aa25.61■■□□□ 1.69
NR1H3-204ENST00000407404 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.6■■□□□ 1.69
NR1H3-204ENST00000407404 DUOX2Q9NRD8 1548 aa25.59■■□□□ 1.69
NR1H3-204ENST00000407404 ANKRD30AQ9BXX3 1397 aa25.59■■□□□ 1.69
NR1H3-204ENST00000407404 KIF15Q9NS87 1388 aa25.59■■□□□ 1.69
NR1H3-204ENST00000407404 PLPPR3Q6T4P5 718 aa25.59■■□□□ 1.69
NR1H3-204ENST00000407404 RRP7BPQ9NSQ0 103 aa25.59■■□□□ 1.69
NR1H3-204ENST00000407404 CNTLNQ9NXG0 1405 aa25.57■■□□□ 1.68
NR1H3-204ENST00000407404 PPP6R1Q9UPN7 881 aa25.57■■□□□ 1.68
NR1H3-204ENST00000407404 RRBP1Q9P2E9 1410 aaKnown RBP25.56■■□□□ 1.68
NR1H3-204ENST00000407404 NCOA1Q15788 1441 aa25.55■■□□□ 1.68
NR1H3-204ENST00000407404 ADGRL2O95490 1459 aa25.55■■□□□ 1.68
NR1H3-204ENST00000407404 EIF2AK4Q9P2K8 1649 aaKnown RBP25.55■■□□□ 1.68
NR1H3-204ENST00000407404 CEBPAP49715 358 aaPredicted RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms