RNA–Protein interactions for RNA: ENST00000407230.5

NCOA1-206, Transcript of nuclear receptor coactivator 1, humanhuman

TSL 1 (best) BASIC

Gene NCOA1, Length 4,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-206ENST00000407230 SOGA1O94964 1423 aa6.99□□□□□ -1.29
NCOA1-206ENST00000407230 RBM19Q9Y4C8 960 aaKnown RBP6.99□□□□□ -1.29
NCOA1-206ENST00000407230 ERCC6Q03468 1493 aa6.99□□□□□ -1.29
NCOA1-206ENST00000407230 NACADO15069 1562 aa6.98□□□□□ -1.29
NCOA1-206ENST00000407230 GOLGA2Q08379 1002 aa6.98□□□□□ -1.29
NCOA1-206ENST00000407230 MLECQ14165 292 aa6.98□□□□□ -1.29
NCOA1-206ENST00000407230 L1TD1Q5T7N2 865 aaKnown RBP6.98□□□□□ -1.29
NCOA1-206ENST00000407230 HDGFP51858 240 aaKnown RBP6.98□□□□□ -1.29
NCOA1-206ENST00000407230 DEKP35659 375 aaKnown RBP6.98□□□□□ -1.29
NCOA1-206ENST00000407230 FOXD1Q16676 465 aa6.98□□□□□ -1.29
NCOA1-206ENST00000407230 ARHGAP35Q9NRY4 1499 aa6.97□□□□□ -1.29
NCOA1-206ENST00000407230 IPO8O15397 1037 aaKnown RBP6.97□□□□□ -1.29
NCOA1-206ENST00000407230 RTF1Q92541 710 aaKnown RBP6.97□□□□□ -1.29
NCOA1-206ENST00000407230 CFAP44Q96MT7 982 aa6.97□□□□□ -1.29
NCOA1-206ENST00000407230 APBB1O00213 710 aa6.97□□□□□ -1.29
NCOA1-206ENST00000407230 BAZ1AQ9NRL2 1556 aaPredicted RBP6.97□□□□□ -1.29
NCOA1-206ENST00000407230 VPS8Q8N3P4 1428 aa6.97□□□□□ -1.29
NCOA1-206ENST00000407230 CHAF1AQ13111 956 aaPredicted RBP6.96□□□□□ -1.29
NCOA1-206ENST00000407230 STK26Q9P289 416 aa6.96□□□□□ -1.29
NCOA1-206ENST00000407230 RCAN3Q9UKA8 241 aa6.96□□□□□ -1.29
NCOA1-206ENST00000407230 MSNP26038 577 aaKnown RBP6.96□□□□□ -1.29
NCOA1-206ENST00000407230 KANK4Q5T7N3 995 aaPredicted RBP6.96□□□□□ -1.3
NCOA1-206ENST00000407230 GGT6Q6P531 493 aa6.96□□□□□ -1.3
NCOA1-206ENST00000407230 HDGFL2Q7Z4V5 671 aaPredicted RBP6.96□□□□□ -1.3
NCOA1-206ENST00000407230 U2AF1L5P0DN76 240 aaPredicted RBP6.95□□□□□ -1.3
NCOA1-206ENST00000407230 U2AF1Q01081 240 aaKnown RBP eCLIP6.95□□□□□ -1.3
NCOA1-206ENST00000407230 RALBP1Q15311 655 aa6.95□□□□□ -1.3
NCOA1-206ENST00000407230 DRC7Q8IY82 874 aa6.95□□□□□ -1.3
NCOA1-206ENST00000407230 CECR2Q9BXF3 1484 aa6.95□□□□□ -1.3
NCOA1-206ENST00000407230 RWDD1Q9H446 243 aaPredicted RBP6.95□□□□□ -1.3
NCOA1-206ENST00000407230 KIAA1211Q6ZU35 1233 aa6.94□□□□□ -1.3
NCOA1-206ENST00000407230 ITPRIPQ8IWB1 547 aa6.94□□□□□ -1.3
NCOA1-206ENST00000407230 MPHOSPH9Q99550 1183 aa6.94□□□□□ -1.3
NCOA1-206ENST00000407230 ROCK2O75116 1388 aaKnown RBP6.94□□□□□ -1.3
NCOA1-206ENST00000407230 TCERG1O14776 1098 aaKnown RBP6.94□□□□□ -1.3
NCOA1-206ENST00000407230 RAB3GAP2Q9H2M9 1393 aa6.94□□□□□ -1.3
NCOA1-206ENST00000407230 CALD1Q05682 793 aaKnown RBP6.93□□□□□ -1.3
NCOA1-206ENST00000407230 GBP4Q96PP9 640 aa6.93□□□□□ -1.3
NCOA1-206ENST00000407230 NUP155O75694 1391 aa6.93□□□□□ -1.3
NCOA1-206ENST00000407230 SLKQ9H2G2 1235 aaPredicted RBP6.93□□□□□ -1.3
NCOA1-206ENST00000407230 GNL2Q13823 731 aaKnown RBP6.92□□□□□ -1.3
NCOA1-206ENST00000407230 PTMSP20962 102 aa6.91□□□□□ -1.3
NCOA1-206ENST00000407230 GZF1Q9H116 711 aaPredicted RBP6.91□□□□□ -1.3
NCOA1-206ENST00000407230 ISY1Q9ULR0 285 aaKnown RBP6.91□□□□□ -1.3
NCOA1-206ENST00000407230 PMFBP1Q8TBY8 1022 aa6.91□□□□□ -1.3
NCOA1-206ENST00000407230 PAK3O75914 559 aaPredicted RBP6.91□□□□□ -1.3
NCOA1-206ENST00000407230 ANKRD30AQ9BXX3 1397 aa6.9□□□□□ -1.3
NCOA1-206ENST00000407230 CARMIL2Q6F5E8 1435 aa6.9□□□□□ -1.3
NCOA1-206ENST00000407230 TRHP20396 242 aaPredicted RBP6.9□□□□□ -1.3
NCOA1-206ENST00000407230 MFAP1P55081 439 aaKnown RBP6.9□□□□□ -1.3
NCOA1-206ENST00000407230 EFCAB2Q5VUJ9 269 aa6.9□□□□□ -1.3
NCOA1-206ENST00000407230 SMC4Q9NTJ3 1288 aa6.9□□□□□ -1.3
NCOA1-206ENST00000407230 CLSTN1O94985 981 aa6.9□□□□□ -1.31
NCOA1-206ENST00000407230 CSB-PGBD3P0DP91 1061 aa6.89□□□□□ -1.31
NCOA1-206ENST00000407230 KIAA2012Q0VF49 1180 aa6.89□□□□□ -1.31
NCOA1-206ENST00000407230 L3MBTL2Q969R5 705 aa6.89□□□□□ -1.31
NCOA1-206ENST00000407230 STK31Q9BXU1 1019 aa6.89□□□□□ -1.31
NCOA1-206ENST00000407230 ZNF330Q9Y3S2 320 aaPredicted RBP6.89□□□□□ -1.31
NCOA1-206ENST00000407230 EIF3AQ14152 1382 aaKnown RBP6.89□□□□□ -1.31
NCOA1-206ENST00000407230 FMN1Q68DA7 1419 aa6.89□□□□□ -1.31
NCOA1-206ENST00000407230 HTATSF1O43719 755 aaKnown RBP6.88□□□□□ -1.31
NCOA1-206ENST00000407230 NLRP13Q86W25 1043 aa6.88□□□□□ -1.31
NCOA1-206ENST00000407230 CLUAP1Q96AJ1 413 aa6.88□□□□□ -1.31
NCOA1-206ENST00000407230 TSHZ2Q9NRE2 1034 aa6.88□□□□□ -1.31
NCOA1-206ENST00000407230 SPAG9O60271 1321 aaKnown RBP6.88□□□□□ -1.31
NCOA1-206ENST00000407230 CCDC146Q8IYE0 955 aa6.88□□□□□ -1.31
NCOA1-206ENST00000407230 SYAP1Q96A49 352 aaPredicted RBP6.88□□□□□ -1.31
NCOA1-206ENST00000407230 ABCC8Q09428 1581 aa6.88□□□□□ -1.31
NCOA1-206ENST00000407230 CHMP4AQ9BY43 222 aa6.88□□□□□ -1.31
NCOA1-206ENST00000407230 CENPJQ9HC77 1338 aaPredicted RBP6.88□□□□□ -1.31
NCOA1-206ENST00000407230 HMMRO75330 724 aa6.88□□□□□ -1.31
NCOA1-206ENST00000407230 TERF2IPQ9NYB0 399 aa6.88□□□□□ -1.31
NCOA1-206ENST00000407230 CCDC88BA6NC98 1476 aa6.87□□□□□ -1.31
NCOA1-206ENST00000407230 KIF3BO15066 747 aa6.87□□□□□ -1.31
NCOA1-206ENST00000407230 IPO9Q96P70 1041 aaKnown RBP6.87□□□□□ -1.31
NCOA1-206ENST00000407230 PDE3BQ13370 1112 aa6.87□□□□□ -1.31
NCOA1-206ENST00000407230 TDRD9Q8NDG6 1382 aaKnown RBP6.87□□□□□ -1.31
NCOA1-206ENST00000407230 TRIM6-TRIM34B2RNG4 842 aa6.87□□□□□ -1.31
NCOA1-206ENST00000407230 GOLGA6L3A6NEY3 463 aa6.86□□□□□ -1.31
NCOA1-206ENST00000407230 GORABQ5T7V8 394 aa6.86□□□□□ -1.31
NCOA1-206ENST00000407230 SLC4A10Q6U841 1118 aa6.86□□□□□ -1.31
NCOA1-206ENST00000407230 GPATCH3Q96I76 525 aa6.86□□□□□ -1.31
NCOA1-206ENST00000407230 HDAC5Q9UQL6 1122 aa6.86□□□□□ -1.31
NCOA1-206ENST00000407230 CHMP3Q9Y3E7 222 aa6.86□□□□□ -1.31
NCOA1-206ENST00000407230 HNRNPMP52272 730 aaKnown RBP eCLIP6.86□□□□□ -1.311e-7■■■■□ 26
NCOA1-206ENST00000407230 FOXD4L1Q9NU39 408 aa6.85□□□□□ -1.31
NCOA1-206ENST00000407230 HSP90B1P14625 803 aaKnown RBP6.85□□□□□ -1.31
NCOA1-206ENST00000407230 NOL8Q76FK4 1167 aaKnown RBP6.85□□□□□ -1.31
NCOA1-206ENST00000407230 LMOD3Q0VAK6 560 aa6.85□□□□□ -1.31
NCOA1-206ENST00000407230 NUTM2DQ5VT03 806 aaPredicted RBP6.85□□□□□ -1.31
NCOA1-206ENST00000407230 TPM4P67936 248 aa6.84□□□□□ -1.31
NCOA1-206ENST00000407230 TAF7LQ5H9L4 462 aa6.84□□□□□ -1.31
NCOA1-206ENST00000407230 ARID3AQ99856 593 aa6.84□□□□□ -1.31
NCOA1-206ENST00000407230 MROH2BQ7Z745 1585 aa6.84□□□□□ -1.31
NCOA1-206ENST00000407230 PHLDB1Q86UU1 1377 aa6.84□□□□□ -1.31
NCOA1-206ENST00000407230 NCBP3Q53F19 620 aaKnown RBP6.84□□□□□ -1.31
NCOA1-206ENST00000407230 KIF15Q9NS87 1388 aa6.83□□□□□ -1.32
NCOA1-206ENST00000407230 FHOD3Q2V2M9 1422 aa6.83□□□□□ -1.32
NCOA1-206ENST00000407230 PDS5BQ9NTI5 1447 aa6.83□□□□□ -1.32
NCOA1-206ENST00000407230 NGDNQ8NEJ9 315 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms