RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 ERICH6Q7L0X2 663 aa16.39■□□□□ 0.21
PCNX4-204ENST00000406949 MYT1LQ9UL68 1186 aa16.39■□□□□ 0.21
PCNX4-204ENST00000406949 IFT140Q96RY7 1462 aa16.37■□□□□ 0.21
PCNX4-204ENST00000406949 SAMD9Q5K651 1589 aa16.37■□□□□ 0.21
PCNX4-204ENST00000406949 PRG4Q92954 1404 aaPredicted RBP16.36■□□□□ 0.21
PCNX4-204ENST00000406949 THOC2Q8NI27 1593 aaKnown RBP16.36■□□□□ 0.21
PCNX4-204ENST00000406949 WASHC2AQ641Q2 1341 aa16.36■□□□□ 0.21
PCNX4-204ENST00000406949 CARMIL2Q6F5E8 1435 aa16.35■□□□□ 0.21
PCNX4-204ENST00000406949 MAGI3Q5TCQ9 1506 aa16.35■□□□□ 0.21
PCNX4-204ENST00000406949 UGGT2Q9NYU1 1516 aa16.35■□□□□ 0.21
PCNX4-204ENST00000406949 MIA2Q96PC5 1412 aa16.32■□□□□ 0.2
PCNX4-204ENST00000406949 TARBP1Q13395 1621 aaKnown RBP16.32■□□□□ 0.2
PCNX4-204ENST00000406949 HNRNPMP52272 730 aaKnown RBP eCLIP16.32■□□□□ 0.2
PCNX4-204ENST00000406949 RGL3Q3MIN7 710 aa16.32■□□□□ 0.2
PCNX4-204ENST00000406949 KIAA0586Q9BVV6 1533 aa16.32■□□□□ 0.2
PCNX4-204ENST00000406949 NBPF8Q3BBV2 869 aa16.31■□□□□ 0.2
PCNX4-204ENST00000406949 ADAMTS12P58397 1594 aa16.3■□□□□ 0.2
PCNX4-204ENST00000406949 TSHZ2Q9NRE2 1034 aa16.3■□□□□ 0.2
PCNX4-204ENST00000406949 DAPK1P53355 1430 aa16.3■□□□□ 0.2
PCNX4-204ENST00000406949 PLB1Q6P1J6 1458 aa16.29■□□□□ 0.2
PCNX4-204ENST00000406949 NUP155O75694 1391 aa16.29■□□□□ 0.2
PCNX4-204ENST00000406949 CARD11Q9BXL7 1154 aa16.28■□□□□ 0.2
PCNX4-204ENST00000406949 GRIN2AQ12879 1464 aa16.28■□□□□ 0.2
PCNX4-204ENST00000406949 ANKRD30AQ9BXX3 1397 aa16.28■□□□□ 0.2
PCNX4-204ENST00000406949 PBRM1Q86U86 1689 aa16.27■□□□□ 0.2
PCNX4-204ENST00000406949 ABCC5O15440 1437 aa16.26■□□□□ 0.19
PCNX4-204ENST00000406949 DCAF11Q8TEB1 546 aa16.26■□□□□ 0.19
PCNX4-204ENST00000406949 C11orf95C9JLR9 678 aaPredicted RBP16.25■□□□□ 0.19
PCNX4-204ENST00000406949 CCDC184Q52MB2 194 aa16.25■□□□□ 0.19
PCNX4-204ENST00000406949 SALL2Q9Y467 1007 aaPredicted RBP16.25■□□□□ 0.19
PCNX4-204ENST00000406949 WDR62O43379 1518 aa16.24■□□□□ 0.19
PCNX4-204ENST00000406949 TROQ12816 1431 aaPredicted RBP16.24■□□□□ 0.19
PCNX4-204ENST00000406949 NUP153P49790 1475 aaKnown RBP16.23■□□□□ 0.19
PCNX4-204ENST00000406949 PRKRIP1Q9H875 184 aaPredicted RBP16.23■□□□□ 0.19
PCNX4-204ENST00000406949 TMC1Q8TDI8 760 aa16.23■□□□□ 0.19
PCNX4-204ENST00000406949 CCDC7Q96M83 1385 aa16.22■□□□□ 0.19
PCNX4-204ENST00000406949 LRRIQ1Q96JM4 1722 aa16.21■□□□□ 0.19
PCNX4-204ENST00000406949 KIF7Q2M1P5 1343 aa16.21■□□□□ 0.19
PCNX4-204ENST00000406949 TCOF1Q13428 1488 aaKnown RBP16.21■□□□□ 0.18
PCNX4-204ENST00000406949 ANKRD30BQ9BXX2 1392 aa16.2■□□□□ 0.18
PCNX4-204ENST00000406949 DISP1Q96F81 1524 aa16.19■□□□□ 0.18
PCNX4-204ENST00000406949 KDM6BO15054 1643 aa16.19■□□□□ 0.18
PCNX4-204ENST00000406949 PTPRGP23470 1445 aa16.18■□□□□ 0.18
PCNX4-204ENST00000406949 KIAA0556O60303 1618 aa16.18■□□□□ 0.18
PCNX4-204ENST00000406949 ANKRD50Q9ULJ7 1429 aa16.17■□□□□ 0.18
PCNX4-204ENST00000406949 ROCK1Q13464 1354 aa16.17■□□□□ 0.18
PCNX4-204ENST00000406949 CNTLNQ9NXG0 1405 aa16.17■□□□□ 0.18
PCNX4-204ENST00000406949 CAMSAP2Q08AD1 1489 aa16.17■□□□□ 0.18
PCNX4-204ENST00000406949 USP47Q96K76 1375 aa16.16■□□□□ 0.18
PCNX4-204ENST00000406949 SYNJ2O15056 1496 aa16.16■□□□□ 0.18
PCNX4-204ENST00000406949 EIF4G3O43432 1585 aaKnown RBP16.15■□□□□ 0.18
PCNX4-204ENST00000406949 RAPGEF6Q8TEU7 1601 aa16.15■□□□□ 0.18
PCNX4-204ENST00000406949 AKNAQ7Z591 1439 aa16.14■□□□□ 0.17
PCNX4-204ENST00000406949 ARHGEF11O15085 1522 aa16.13■□□□□ 0.17
PCNX4-204ENST00000406949 NCOA1Q15788 1441 aa16.13■□□□□ 0.17
PCNX4-204ENST00000406949 ST20-MTHFSA0A0A6YYL1 179 aa16.13■□□□□ 0.17
PCNX4-204ENST00000406949 MAGI1Q96QZ7 1491 aaPredicted RBP16.13■□□□□ 0.17
PCNX4-204ENST00000406949 KIF15Q9NS87 1388 aa16.13■□□□□ 0.17
PCNX4-204ENST00000406949 B4GALNT3Q6L9W6 998 aa16.12■□□□□ 0.17
PCNX4-204ENST00000406949 GPATCH8Q9UKJ3 1502 aaKnown RBP16.11■□□□□ 0.17
PCNX4-204ENST00000406949 RPRD2Q5VT52 1461 aaKnown RBP16.11■□□□□ 0.17
PCNX4-204ENST00000406949 KIAA1107Q9UPP5 1409 aa16.1■□□□□ 0.17
PCNX4-204ENST00000406949 C9orf84Q5VXU9 1444 aa16.1■□□□□ 0.17
PCNX4-204ENST00000406949 RBM19Q9Y4C8 960 aaKnown RBP16.1■□□□□ 0.17
PCNX4-204ENST00000406949 ROCK2O75116 1388 aaKnown RBP16.08■□□□□ 0.17
PCNX4-204ENST00000406949 DENND4BO75064 1496 aaPredicted RBP16.06■□□□□ 0.16
PCNX4-204ENST00000406949 GCC2Q8IWJ2 1684 aa16.06■□□□□ 0.16
PCNX4-204ENST00000406949 CC2D1BQ5T0F9 858 aaKnown RBP16.05■□□□□ 0.16
PCNX4-204ENST00000406949 PPP4R2Q9NY27 417 aa16.04■□□□□ 0.16
PCNX4-204ENST00000406949 DNMT1P26358 1616 aaKnown RBP16.03■□□□□ 0.16
PCNX4-204ENST00000406949 CEP170Q5SW79 1584 aa16.03■□□□□ 0.16
PCNX4-204ENST00000406949 KIF14Q15058 1648 aa16.03■□□□□ 0.16
PCNX4-204ENST00000406949 CCDC136Q96JN2 1154 aa16.03■□□□□ 0.16
PCNX4-204ENST00000406949 ATP10BO94823 1461 aa16.02■□□□□ 0.16
PCNX4-204ENST00000406949 ZBED9Q6R2W3 1325 aa16.01■□□□□ 0.15
PCNX4-204ENST00000406949 CCDC144AA2RUR9 1427 aa16■□□□□ 0.15
PCNX4-204ENST00000406949 PZPP20742 1482 aa16■□□□□ 0.15
PCNX4-204ENST00000406949 CHGAP10645 457 aaKnown RBP16■□□□□ 0.15
PCNX4-204ENST00000406949 KDM5BQ9UGL1 1544 aa15.99■□□□□ 0.15
PCNX4-204ENST00000406949 NBPF1Q3BBV0 1214 aa15.98■□□□□ 0.15
PCNX4-204ENST00000406949 TEX14Q8IWB6 1497 aa15.98■□□□□ 0.15
PCNX4-204ENST00000406949 RSPH4AQ5TD94 716 aa15.98■□□□□ 0.15
PCNX4-204ENST00000406949 EFCAB2Q5VUJ9 269 aa15.98■□□□□ 0.15
PCNX4-204ENST00000406949 ANP32EQ9BTT0 268 aa15.97■□□□□ 0.15
PCNX4-204ENST00000406949 SENP3Q9H4L4 574 aaPredicted RBP15.97■□□□□ 0.15
PCNX4-204ENST00000406949 ARHGAP5Q13017 1502 aa15.96■□□□□ 0.15
PCNX4-204ENST00000406949 NUP160Q12769 1436 aa15.95■□□□□ 0.14
PCNX4-204ENST00000406949 ITSN2Q9NZM3 1697 aa15.94■□□□□ 0.14
PCNX4-204ENST00000406949 NUDCQ9Y266 331 aa15.93■□□□□ 0.14
PCNX4-204ENST00000406949 SPAG9O60271 1321 aaKnown RBP15.91■□□□□ 0.14
PCNX4-204ENST00000406949 TMF1P82094 1093 aa15.91■□□□□ 0.14
PCNX4-204ENST00000406949 AFAP1Q8N556 730 aa15.91■□□□□ 0.14
PCNX4-204ENST00000406949 KTN1Q86UP2 1357 aaKnown RBP15.9■□□□□ 0.14
PCNX4-204ENST00000406949 CCDC141Q6ZP82 1450 aa15.9■□□□□ 0.14
PCNX4-204ENST00000406949 RALBP1Q15311 655 aa15.89■□□□□ 0.13
PCNX4-204ENST00000406949 MYBBP1AQ9BQG0 1328 aaKnown RBP15.89■□□□□ 0.13
PCNX4-204ENST00000406949 PANK3Q9H999 370 aa15.88■□□□□ 0.13
PCNX4-204ENST00000406949 KNSTRNQ9Y448 316 aa15.88■□□□□ 0.13
PCNX4-204ENST00000406949 KIF3BO15066 747 aa15.88■□□□□ 0.13
PCNX4-204ENST00000406949 NPM1P06748 294 aaKnown RBP eCLIP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms