RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 SCAPERQ9BY12 1400 aa32.79■■■□□ 2.84
PDGFA-204ENST00000405692 MAP3K1Q13233 1512 aa32.79■■■□□ 2.84
PDGFA-204ENST00000405692 APLP2Q06481 763 aa32.79■■■□□ 2.84
PDGFA-204ENST00000405692 CCNB3Q8WWL7 1395 aa32.78■■■□□ 2.84
PDGFA-204ENST00000405692 CDC42BPBQ9Y5S2 1711 aa32.75■■■□□ 2.83
PDGFA-204ENST00000405692 GPATCH8Q9UKJ3 1502 aaKnown RBP32.74■■■□□ 2.83
PDGFA-204ENST00000405692 FRMPD1Q5SYB0 1578 aa32.73■■■□□ 2.83
PDGFA-204ENST00000405692 CDC42BPAQ5VT25 1732 aa32.73■■■□□ 2.83
PDGFA-204ENST00000405692 RICTORQ6R327 1708 aa32.71■■■□□ 2.83
PDGFA-204ENST00000405692 POGZQ7Z3K3 1410 aa32.7■■■□□ 2.83
PDGFA-204ENST00000405692 LRRC9Q6ZRR7 1453 aa32.7■■■□□ 2.83
PDGFA-204ENST00000405692 CFDP1Q9UEE9 299 aaPredicted RBP32.7■■■□□ 2.83
PDGFA-204ENST00000405692 SUPT6HQ7KZ85 1726 aaKnown RBP32.68■■■□□ 2.82
PDGFA-204ENST00000405692 ZNF777Q9ULD5 760 aaPredicted RBP32.66■■■□□ 2.82
PDGFA-204ENST00000405692 ZMYM4Q5VZL5 1548 aa32.66■■■□□ 2.82
PDGFA-204ENST00000405692 ZNF518AQ6AHZ1 1483 aa32.65■■■□□ 2.82
PDGFA-204ENST00000405692 MAGI2Q86UL8 1455 aa32.65■■■□□ 2.82
PDGFA-204ENST00000405692 NCOA2Q15596 1464 aa32.64■■■□□ 2.82
PDGFA-204ENST00000405692 ITSN2Q9NZM3 1697 aa32.62■■■□□ 2.81
PDGFA-204ENST00000405692 ABCC1P33527 1531 aa32.61■■■□□ 2.81
PDGFA-204ENST00000405692 AEBP2Q6ZN18 517 aaPredicted RBP32.61■■■□□ 2.81
PDGFA-204ENST00000405692 PLEKHH2Q8IVE3 1493 aa32.61■■■□□ 2.81
PDGFA-204ENST00000405692 KANK4Q5T7N3 995 aaPredicted RBP32.6■■■□□ 2.81
PDGFA-204ENST00000405692 AFAP1Q8N556 730 aa32.57■■■□□ 2.8
PDGFA-204ENST00000405692 ZFYVE16Q7Z3T8 1539 aa32.56■■■□□ 2.8
PDGFA-204ENST00000405692 ARHGEF40Q8TER5 1519 aa32.56■■■□□ 2.8
PDGFA-204ENST00000405692 SAMD9LQ8IVG5 1584 aa32.56■■■□□ 2.8
PDGFA-204ENST00000405692 KIAA1107Q9UPP5 1409 aa32.55■■■□□ 2.8
PDGFA-204ENST00000405692 KDM5CP41229 1560 aa32.53■■■□□ 2.8
PDGFA-204ENST00000405692 ARHGEF12Q9NZN5 1544 aa32.53■■■□□ 2.8
PDGFA-204ENST00000405692 MYT1LQ9UL68 1186 aa32.53■■■□□ 2.8
PDGFA-204ENST00000405692 KDM4FA0A1W2PPD8 638 aa32.52■■■□□ 2.8
PDGFA-204ENST00000405692 TRAPPC8Q9Y2L5 1435 aa32.51■■■□□ 2.8
PDGFA-204ENST00000405692 HNRNPMP52272 730 aaKnown RBP eCLIP32.49■■■□□ 2.79
PDGFA-204ENST00000405692 SYCP2Q9BX26 1530 aa32.49■■■□□ 2.79
PDGFA-204ENST00000405692 YEATS2Q9ULM3 1422 aa32.49■■■□□ 2.79
PDGFA-204ENST00000405692 MLH3Q9UHC1 1453 aa32.47■■■□□ 2.79
PDGFA-204ENST00000405692 ARID4BQ4LE39 1312 aaPredicted RBP32.47■■■□□ 2.79
PDGFA-204ENST00000405692 HECW2Q9P2P5 1572 aa32.46■■■□□ 2.79
PDGFA-204ENST00000405692 ATP10AO60312 1499 aa32.44■■■□□ 2.78
PDGFA-204ENST00000405692 ZNF644Q9H582 1327 aaPredicted RBP32.43■■■□□ 2.78
PDGFA-204ENST00000405692 MYOM3Q5VTT5 1437 aa32.41■■■□□ 2.78
PDGFA-204ENST00000405692 RSPH4AQ5TD94 716 aa32.4■■■□□ 2.78
PDGFA-204ENST00000405692 SPAG9O60271 1321 aaKnown RBP32.4■■■□□ 2.78
PDGFA-204ENST00000405692 C9orf84Q5VXU9 1444 aa32.4■■■□□ 2.78
PDGFA-204ENST00000405692 MIA2Q96PC5 1412 aa32.39■■■□□ 2.78
PDGFA-204ENST00000405692 CAMSAP2Q08AD1 1489 aa32.38■■■□□ 2.77
PDGFA-204ENST00000405692 MBD5Q9P267 1494 aa32.35■■■□□ 2.77
PDGFA-204ENST00000405692 DIP2CQ9Y2E4 1556 aa32.32■■■□□ 2.76
PDGFA-204ENST00000405692 KIDINS220Q9ULH0 1771 aa32.3■■■□□ 2.76
PDGFA-204ENST00000405692 CCDC141Q6ZP82 1450 aa32.29■■■□□ 2.76
PDGFA-204ENST00000405692 BCORL1Q5H9F3 1711 aa32.29■■■□□ 2.76
PDGFA-204ENST00000405692 REREQ9P2R6 1566 aa32.28■■■□□ 2.76
PDGFA-204ENST00000405692 ATP7AQ04656 1500 aa32.28■■■□□ 2.76
PDGFA-204ENST00000405692 ABCA6Q8N139 1617 aa32.28■■■□□ 2.76
PDGFA-204ENST00000405692 RTEL1-TNFRSF6BF6WH68 1400 aa32.26■■■□□ 2.75
PDGFA-204ENST00000405692 ARHGEF5Q12774 1597 aa32.25■■■□□ 2.75
PDGFA-204ENST00000405692 TSPY4P0CV99 314 aa32.25■■■□□ 2.75
PDGFA-204ENST00000405692 TSPY10P0CW01 314 aa32.25■■■□□ 2.75
PDGFA-204ENST00000405692 ADAMTSL3P82987 1691 aa32.24■■■□□ 2.75
PDGFA-204ENST00000405692 INO80Q9ULG1 1556 aaPredicted RBP32.24■■■□□ 2.75
PDGFA-204ENST00000405692 FGD6Q6ZV73 1430 aa32.2■■■□□ 2.75
PDGFA-204ENST00000405692 MLECQ14165 292 aa32.2■■■□□ 2.75
PDGFA-204ENST00000405692 SIGLEC1Q9BZZ2 1709 aa32.2■■■□□ 2.74
PDGFA-204ENST00000405692 AGLP35573 1532 aa32.19■■■□□ 2.74
PDGFA-204ENST00000405692 PTPN23Q9H3S7 1636 aa32.17■■■□□ 2.74
PDGFA-204ENST00000405692 A2MP01023 1474 aa32.15■■■□□ 2.74
PDGFA-204ENST00000405692 MADDQ8WXG6 1647 aa32.15■■■□□ 2.74
PDGFA-204ENST00000405692 TCOF1Q13428 1488 aaKnown RBP32.12■■■□□ 2.73
PDGFA-204ENST00000405692 PTPRMP28827 1452 aa32.11■■■□□ 2.73
PDGFA-204ENST00000405692 ADGBQ8N7X0 1667 aa32.11■■■□□ 2.73
PDGFA-204ENST00000405692 PLXNC1O60486 1568 aa32.07■■■□□ 2.72
PDGFA-204ENST00000405692 MAST1Q9Y2H9 1570 aa32.07■■■□□ 2.72
PDGFA-204ENST00000405692 DHX29Q7Z478 1369 aaKnown RBP32.07■■■□□ 2.72
PDGFA-204ENST00000405692 ESF1Q9H501 851 aaKnown RBP32.06■■■□□ 2.72
PDGFA-204ENST00000405692 RIMS1Q86UR5 1692 aaKnown RBP32.05■■■□□ 2.72
PDGFA-204ENST00000405692 FER1L4A9Z1Z3 1794 aa32.04■■■□□ 2.72
PDGFA-204ENST00000405692 FAM50AQ14320 339 aaKnown RBP32.02■■■□□ 2.72
PDGFA-204ENST00000405692 PPARGC1BQ86YN6 1023 aaKnown RBP32.02■■■□□ 2.72
PDGFA-204ENST00000405692 SHANK2Q9UPX8 1470 aa32.02■■■□□ 2.72
PDGFA-204ENST00000405692 ABCC5O15440 1437 aa32.01■■■□□ 2.72
PDGFA-204ENST00000405692 DAPK1P53355 1430 aa32■■■□□ 2.71
PDGFA-204ENST00000405692 DNMT1P26358 1616 aaKnown RBP31.99■■■□□ 2.71
PDGFA-204ENST00000405692 CNTLNQ9NXG0 1405 aa31.96■■■□□ 2.71
PDGFA-204ENST00000405692 PPP6R1Q9UPN7 881 aa31.96■■■□□ 2.71
PDGFA-204ENST00000405692 CROCC2H7BZ55 1655 aa31.95■■■□□ 2.7
PDGFA-204ENST00000405692 GGT6Q6P531 493 aa31.94■■■□□ 2.7
PDGFA-204ENST00000405692 KIF3BO15066 747 aa31.92■■■□□ 2.7
PDGFA-204ENST00000405692 PLPPR3Q6T4P5 718 aa31.9■■■□□ 2.7
PDGFA-204ENST00000405692 ANKRD30AQ9BXX3 1397 aa31.89■■■□□ 2.7
PDGFA-204ENST00000405692 DUOX2Q9NRD8 1548 aa31.88■■■□□ 2.69
PDGFA-204ENST00000405692 KIF15Q9NS87 1388 aa31.87■■■□□ 2.69
PDGFA-204ENST00000405692 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.86■■■□□ 2.692e-6■■■■□ 19.8
PDGFA-204ENST00000405692 RRP7BPQ9NSQ0 103 aa31.85■■■□□ 2.69
PDGFA-204ENST00000405692 CHIC2Q9UKJ5 165 aa31.85■■■□□ 2.69
PDGFA-204ENST00000405692 CEBPAP49715 358 aaPredicted RBP31.82■■■□□ 2.68
PDGFA-204ENST00000405692 EIF2AK4Q9P2K8 1649 aaKnown RBP31.81■■■□□ 2.68
PDGFA-204ENST00000405692 NCOA1Q15788 1441 aa31.8■■■□□ 2.68
PDGFA-204ENST00000405692 FAM135AQ9P2D6 1515 aa31.8■■■□□ 2.68
PDGFA-204ENST00000405692 MROH2AA6NES4 1674 aa31.8■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms