RNA–Protein interactions for RNA: ENST00000405581.3

NRXN1-209, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 5,078 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-209ENST00000405581 MLECQ14165 292 aa22.12■■□□□ 1.13
NRXN1-209ENST00000405581 CCER2I3L3R5 266 aa22.11■■□□□ 1.13
NRXN1-209ENST00000405581 IPO8O15397 1037 aaKnown RBP22.1■■□□□ 1.13
NRXN1-209ENST00000405581 HSCBQ8IWL3 235 aa22.1■■□□□ 1.13
NRXN1-209ENST00000405581 VPS8Q8N3P4 1428 aa22.1■■□□□ 1.13
NRXN1-209ENST00000405581 NAP1L2Q9ULW6 460 aaPredicted RBP22.09■■□□□ 1.13
NRXN1-209ENST00000405581 ABCC8Q09428 1581 aa22.08■■□□□ 1.13
NRXN1-209ENST00000405581 TOP2AP11388 1531 aaKnown RBP22.08■■□□□ 1.13
NRXN1-209ENST00000405581 TULP1O00294 542 aaPredicted RBP22.08■■□□□ 1.12
NRXN1-209ENST00000405581 TPRNQ4KMQ1 711 aa22.08■■□□□ 1.12
NRXN1-209ENST00000405581 GGT6Q6P531 493 aa22.08■■□□□ 1.12
NRXN1-209ENST00000405581 PLCB2Q00722 1185 aa22.07■■□□□ 1.12
NRXN1-209ENST00000405581 SETD5Q9C0A6 1442 aa22.06■■□□□ 1.12
NRXN1-209ENST00000405581 ARHGAP35Q9NRY4 1499 aa22.06■■□□□ 1.12
NRXN1-209ENST00000405581 EFCAB2Q5VUJ9 269 aa22.06■■□□□ 1.12
NRXN1-209ENST00000405581 KTN1Q86UP2 1357 aaKnown RBP22.05■■□□□ 1.12
NRXN1-209ENST00000405581 PKD2Q13563 968 aa22.04■■□□□ 1.12
NRXN1-209ENST00000405581 NOP58Q9Y2X3 529 aaKnown RBP22.04■■□□□ 1.12
NRXN1-209ENST00000405581 SOX12O15370 315 aa22.03■■□□□ 1.12
NRXN1-209ENST00000405581 SAFB2Q14151 953 aaKnown RBP eCLIP21.99■■□□□ 1.11
NRXN1-209ENST00000405581 TAOK2Q9UL54 1235 aa21.99■■□□□ 1.11
NRXN1-209ENST00000405581 HDAC5Q9UQL6 1122 aa21.99■■□□□ 1.11
NRXN1-209ENST00000405581 TDRD9Q8NDG6 1382 aaKnown RBP21.98■■□□□ 1.11
NRXN1-209ENST00000405581 CADPSQ9ULU8 1353 aa21.98■■□□□ 1.11
NRXN1-209ENST00000405581 FMN1Q68DA7 1419 aa21.97■■□□□ 1.11
NRXN1-209ENST00000405581 HSPA5P11021 654 aaKnown RBP21.97■■□□□ 1.11
NRXN1-209ENST00000405581 RALBP1Q15311 655 aa21.97■■□□□ 1.11
NRXN1-209ENST00000405581 KIAA1211Q6ZU35 1233 aa21.97■■□□□ 1.11
NRXN1-209ENST00000405581 ANKRD30AQ9BXX3 1397 aa21.96■■□□□ 1.11
NRXN1-209ENST00000405581 WIZO95785 1651 aa21.96■■□□□ 1.11
NRXN1-209ENST00000405581 L1TD1Q5T7N2 865 aaKnown RBP21.96■■□□□ 1.11
NRXN1-209ENST00000405581 STK26Q9P289 416 aa21.96■■□□□ 1.11
NRXN1-209ENST00000405581 EIF3AQ14152 1382 aaKnown RBP21.96■■□□□ 1.11
NRXN1-209ENST00000405581 B4GALNT3Q6L9W6 998 aa21.95■■□□□ 1.1
NRXN1-209ENST00000405581 CHAF1AQ13111 956 aaPredicted RBP21.94■■□□□ 1.1
NRXN1-209ENST00000405581 U2AF1L5P0DN76 240 aaPredicted RBP21.93■■□□□ 1.1
NRXN1-209ENST00000405581 U2AF1Q01081 240 aaKnown RBP eCLIP21.93■■□□□ 1.1
NRXN1-209ENST00000405581 CSB-PGBD3P0DP91 1061 aa21.93■■□□□ 1.1
NRXN1-209ENST00000405581 RSPH4AQ5TD94 716 aa21.93■■□□□ 1.1
NRXN1-209ENST00000405581 NUP155O75694 1391 aa21.91■■□□□ 1.1
NRXN1-209ENST00000405581 RWDD1Q9H446 243 aaPredicted RBP21.91■■□□□ 1.1
NRXN1-209ENST00000405581 PTMSP20962 102 aa21.91■■□□□ 1.1
NRXN1-209ENST00000405581 NAP1L5Q96NT1 182 aaPredicted RBP21.9■■□□□ 1.1
NRXN1-209ENST00000405581 ROCK2O75116 1388 aaKnown RBP21.9■■□□□ 1.1
NRXN1-209ENST00000405581 SPAG9O60271 1321 aaKnown RBP21.9■■□□□ 1.1
NRXN1-209ENST00000405581 GNL2Q13823 731 aaKnown RBP21.89■■□□□ 1.1
NRXN1-209ENST00000405581 ATAD2BQ9ULI0 1458 aa21.89■■□□□ 1.09
NRXN1-209ENST00000405581 PAK3O75914 559 aaPredicted RBP21.89■■□□□ 1.09
NRXN1-209ENST00000405581 TERF2IPQ9NYB0 399 aa21.89■■□□□ 1.09
NRXN1-209ENST00000405581 STK31Q9BXU1 1019 aa21.88■■□□□ 1.09
NRXN1-209ENST00000405581 HTATSF1O43719 755 aaKnown RBP21.88■■□□□ 1.09
NRXN1-209ENST00000405581 ISY1Q9ULR0 285 aaKnown RBP21.87■■□□□ 1.09
NRXN1-209ENST00000405581 KANK4Q5T7N3 995 aaPredicted RBP21.87■■□□□ 1.09
NRXN1-209ENST00000405581 MPHOSPH9Q99550 1183 aa21.86■■□□□ 1.09
NRXN1-209ENST00000405581 TMX4Q9H1E5 349 aaPredicted RBP21.86■■□□□ 1.09
NRXN1-209ENST00000405581 EID1Q9Y6B2 187 aa21.85■■□□□ 1.09
NRXN1-209ENST00000405581 RAPGEF2Q9Y4G8 1499 aa21.84■■□□□ 1.09
NRXN1-209ENST00000405581 GBP4Q96PP9 640 aa21.82■■□□□ 1.08
NRXN1-209ENST00000405581 RCAN3Q9UKA8 241 aa21.82■■□□□ 1.08
NRXN1-209ENST00000405581 HMMRO75330 724 aa21.82■■□□□ 1.08
NRXN1-209ENST00000405581 MSNP26038 577 aaKnown RBP21.82■■□□□ 1.08
NRXN1-209ENST00000405581 SMARCA4P51532 1647 aa21.82■■□□□ 1.08
NRXN1-209ENST00000405581 LMOD3Q0VAK6 560 aa21.82■■□□□ 1.08
NRXN1-209ENST00000405581 KIF3BO15066 747 aa21.81■■□□□ 1.08
NRXN1-209ENST00000405581 PMFBP1Q8TBY8 1022 aa21.81■■□□□ 1.08
NRXN1-209ENST00000405581 GPATCH3Q96I76 525 aa21.8■■□□□ 1.08
NRXN1-209ENST00000405581 ITPRIPQ8IWB1 547 aa21.8■■□□□ 1.08
NRXN1-209ENST00000405581 CCDC34Q96HJ3 373 aa21.8■■□□□ 1.08
NRXN1-209ENST00000405581 CLSTN1O94985 981 aa21.8■■□□□ 1.08
NRXN1-209ENST00000405581 DRC7Q8IY82 874 aa21.8■■□□□ 1.08
NRXN1-209ENST00000405581 APBB1O00213 710 aa21.78■■□□□ 1.08
NRXN1-209ENST00000405581 GORABQ5T7V8 394 aa21.77■■□□□ 1.08
NRXN1-209ENST00000405581 TCERG1O14776 1098 aaKnown RBP21.77■■□□□ 1.08
NRXN1-209ENST00000405581 ZNF330Q9Y3S2 320 aaPredicted RBP21.76■■□□□ 1.07
NRXN1-209ENST00000405581 SYAP1Q96A49 352 aaPredicted RBP21.75■■□□□ 1.07
NRXN1-209ENST00000405581 KIAA2012Q0VF49 1180 aa21.74■■□□□ 1.07
NRXN1-209ENST00000405581 RAB3GAP2Q9H2M9 1393 aa21.74■■□□□ 1.07
NRXN1-209ENST00000405581 PDE3BQ13370 1112 aa21.74■■□□□ 1.07
NRXN1-209ENST00000405581 FOXD1Q16676 465 aa21.74■■□□□ 1.07
NRXN1-209ENST00000405581 TAF7LQ5H9L4 462 aa21.73■■□□□ 1.07
NRXN1-209ENST00000405581 NGDNQ8NEJ9 315 aaKnown RBP21.73■■□□□ 1.07
NRXN1-209ENST00000405581 NLRP13Q86W25 1043 aa21.72■■□□□ 1.07
NRXN1-209ENST00000405581 WASHC2CQ9Y4E1 1318 aa21.72■■□□□ 1.07
NRXN1-209ENST00000405581 SMC4Q9NTJ3 1288 aa21.72■■□□□ 1.07
NRXN1-209ENST00000405581 PHLDB1Q86UU1 1377 aa21.71■■□□□ 1.07
NRXN1-209ENST00000405581 CCDC18Q5T9S5 1454 aa21.71■■□□□ 1.07
NRXN1-209ENST00000405581 FHOD3Q2V2M9 1422 aa21.69■■□□□ 1.06
NRXN1-209ENST00000405581 TPM4P67936 248 aa21.68■■□□□ 1.06
NRXN1-209ENST00000405581 AMPHP49418 695 aa21.68■■□□□ 1.06
NRXN1-209ENST00000405581 CCDC9Q9Y3X0 531 aaKnown RBP21.68■■□□□ 1.06
NRXN1-209ENST00000405581 SPRYD3Q8NCJ5 442 aa21.67■■□□□ 1.06
NRXN1-209ENST00000405581 CSPP1Q1MSJ5 1256 aa21.66■■□□□ 1.06
NRXN1-209ENST00000405581 CHMP3Q9Y3E7 222 aa21.66■■□□□ 1.06
NRXN1-209ENST00000405581 FANCD2Q9BXW9 1451 aa21.65■■□□□ 1.06
NRXN1-209ENST00000405581 KIF3AQ9Y496 699 aa21.64■■□□□ 1.05
NRXN1-209ENST00000405581 CENPJQ9HC77 1338 aaPredicted RBP21.63■■□□□ 1.05
NRXN1-209ENST00000405581 HNRNPMP52272 730 aaKnown RBP eCLIP21.63■■□□□ 1.05
NRXN1-209ENST00000405581 JPH4Q96JJ6 628 aa21.63■■□□□ 1.05
NRXN1-209ENST00000405581 L3MBTL2Q969R5 705 aa21.63■■□□□ 1.05
NRXN1-209ENST00000405581 UACAQ9BZF9 1416 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms