RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 CFDP1Q9UEE9 299 aaPredicted RBP18.93■□□□□ 0.62
LINC00339-201ENST00000404210 ARAP3Q8WWN8 1544 aa18.93■□□□□ 0.62
LINC00339-201ENST00000404210 ITSN2Q9NZM3 1697 aa18.92■□□□□ 0.62
LINC00339-201ENST00000404210 MIA2Q96PC5 1412 aa18.91■□□□□ 0.62
LINC00339-201ENST00000404210 CDC42BPBQ9Y5S2 1711 aa18.91■□□□□ 0.62
LINC00339-201ENST00000404210 PREX2Q70Z35 1606 aa18.9■□□□□ 0.62
LINC00339-201ENST00000404210 TSPOAP1O95153 1857 aa18.88■□□□□ 0.61
LINC00339-201ENST00000404210 ARHGAP5Q13017 1502 aa18.87■□□□□ 0.61
LINC00339-201ENST00000404210 TEX14Q8IWB6 1497 aa18.86■□□□□ 0.61
LINC00339-201ENST00000404210 FGD6Q6ZV73 1430 aa18.86■□□□□ 0.61
LINC00339-201ENST00000404210 ZNF777Q9ULD5 760 aaPredicted RBP18.86■□□□□ 0.61
LINC00339-201ENST00000404210 FANCAO15360 1455 aa18.85■□□□□ 0.61
LINC00339-201ENST00000404210 PPRC1Q5VV67 1664 aaKnown RBP18.85■□□□□ 0.61
LINC00339-201ENST00000404210 NEO1Q92859 1461 aa18.84■□□□□ 0.61
LINC00339-201ENST00000404210 AKNAQ7Z591 1439 aa18.83■□□□□ 0.61
LINC00339-201ENST00000404210 RRBP1Q9P2E9 1410 aaKnown RBP18.83■□□□□ 0.61
LINC00339-201ENST00000404210 ZNF644Q9H582 1327 aaPredicted RBP18.82■□□□□ 0.6
LINC00339-201ENST00000404210 CFAP74Q9C0B2 1584 aa18.82■□□□□ 0.6
LINC00339-201ENST00000404210 PTPN23Q9H3S7 1636 aa18.82■□□□□ 0.6
LINC00339-201ENST00000404210 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.81■□□□□ 0.6
LINC00339-201ENST00000404210 TCOF1Q13428 1488 aaKnown RBP18.81■□□□□ 0.6
LINC00339-201ENST00000404210 PLEKHH2Q8IVE3 1493 aa18.81■□□□□ 0.6
LINC00339-201ENST00000404210 RSPH4AQ5TD94 716 aa18.8■□□□□ 0.6
LINC00339-201ENST00000404210 KIAA1107Q9UPP5 1409 aa18.8■□□□□ 0.6
LINC00339-201ENST00000404210 FAM50AQ14320 339 aaKnown RBP18.79■□□□□ 0.6
LINC00339-201ENST00000404210 SAMD9LQ8IVG5 1584 aa18.79■□□□□ 0.6
LINC00339-201ENST00000404210 CAMSAP2Q08AD1 1489 aa18.78■□□□□ 0.6
LINC00339-201ENST00000404210 HNRNPMP52272 730 aaKnown RBP eCLIP18.77■□□□□ 0.6
LINC00339-201ENST00000404210 SCAPERQ9BY12 1400 aa18.76■□□□□ 0.59
LINC00339-201ENST00000404210 ADGRL1O94910 1474 aa18.76■□□□□ 0.59
LINC00339-201ENST00000404210 ABCC1P33527 1531 aa18.74■□□□□ 0.59
LINC00339-201ENST00000404210 MBD5Q9P267 1494 aa18.74■□□□□ 0.59
LINC00339-201ENST00000404210 ARHGEF12Q9NZN5 1544 aa18.74■□□□□ 0.59
LINC00339-201ENST00000404210 TRIM26Q12899 539 aaPredicted RBP18.73■□□□□ 0.59
LINC00339-201ENST00000404210 DENND4BO75064 1496 aaPredicted RBP18.71■□□□□ 0.59
LINC00339-201ENST00000404210 ARHGEF5Q12774 1597 aa18.71■□□□□ 0.59
LINC00339-201ENST00000404210 SYCP2Q9BX26 1530 aa18.7■□□□□ 0.58
LINC00339-201ENST00000404210 TSPY4P0CV99 314 aa18.7■□□□□ 0.58
LINC00339-201ENST00000404210 TSPY10P0CW01 314 aa18.7■□□□□ 0.58
LINC00339-201ENST00000404210 TRAPPC8Q9Y2L5 1435 aa18.69■□□□□ 0.58
LINC00339-201ENST00000404210 AFAP1Q8N556 730 aa18.69■□□□□ 0.58
LINC00339-201ENST00000404210 ABCC5O15440 1437 aa18.68■□□□□ 0.58
LINC00339-201ENST00000404210 RAPGEF3O95398 923 aa18.68■□□□□ 0.58
LINC00339-201ENST00000404210 DNMT1P26358 1616 aaKnown RBP18.67■□□□□ 0.58
LINC00339-201ENST00000404210 DAPK1P53355 1430 aa18.67■□□□□ 0.58
LINC00339-201ENST00000404210 CCDC141Q6ZP82 1450 aa18.67■□□□□ 0.58
LINC00339-201ENST00000404210 COL17A1Q9UMD9 1497 aaPredicted RBP18.67■□□□□ 0.58
LINC00339-201ENST00000404210 ZNF518AQ6AHZ1 1483 aa18.66■□□□□ 0.58
LINC00339-201ENST00000404210 POGZQ7Z3K3 1410 aa18.66■□□□□ 0.58
LINC00339-201ENST00000404210 ITGAEP38570 1179 aa18.65■□□□□ 0.58
LINC00339-201ENST00000404210 RICTORQ6R327 1708 aa18.64■□□□□ 0.57
LINC00339-201ENST00000404210 SPAG9O60271 1321 aaKnown RBP18.63■□□□□ 0.57
LINC00339-201ENST00000404210 RTEL1-TNFRSF6BF6WH68 1400 aa18.62■□□□□ 0.57
LINC00339-201ENST00000404210 PTPRKQ15262 1439 aa18.62■□□□□ 0.57
LINC00339-201ENST00000404210 KDM6BO15054 1643 aa18.61■□□□□ 0.57
LINC00339-201ENST00000404210 KDM5CP41229 1560 aa18.61■□□□□ 0.57
LINC00339-201ENST00000404210 SHANK2Q9UPX8 1470 aa18.61■□□□□ 0.57
LINC00339-201ENST00000404210 MAST1Q9Y2H9 1570 aa18.6■□□□□ 0.57
LINC00339-201ENST00000404210 MLH3Q9UHC1 1453 aa18.6■□□□□ 0.57
LINC00339-201ENST00000404210 CHIC2Q9UKJ5 165 aa18.6■□□□□ 0.57
LINC00339-201ENST00000404210 CROCC2H7BZ55 1655 aa18.6■□□□□ 0.57
LINC00339-201ENST00000404210 C9orf84Q5VXU9 1444 aa18.59■□□□□ 0.57
LINC00339-201ENST00000404210 MYT1LQ9UL68 1186 aa18.59■□□□□ 0.57
LINC00339-201ENST00000404210 FRMPD1Q5SYB0 1578 aa18.59■□□□□ 0.57
LINC00339-201ENST00000404210 MAGI2Q86UL8 1455 aa18.58■□□□□ 0.57
LINC00339-201ENST00000404210 ZMYM4Q5VZL5 1548 aa18.57■□□□□ 0.56
LINC00339-201ENST00000404210 ROCK1Q13464 1354 aa18.56■□□□□ 0.56
LINC00339-201ENST00000404210 ANKRD30AQ9BXX3 1397 aa18.56■□□□□ 0.56
LINC00339-201ENST00000404210 ADGRL2O95490 1459 aa18.56■□□□□ 0.56
LINC00339-201ENST00000404210 NCOA1Q15788 1441 aa18.56■□□□□ 0.56
LINC00339-201ENST00000404210 KIDINS220Q9ULH0 1771 aa18.55■□□□□ 0.56
LINC00339-201ENST00000404210 HECW2Q9P2P5 1572 aa18.55■□□□□ 0.56
LINC00339-201ENST00000404210 ATP7AQ04656 1500 aa18.54■□□□□ 0.56
LINC00339-201ENST00000404210 INO80Q9ULG1 1556 aaPredicted RBP18.54■□□□□ 0.56
LINC00339-201ENST00000404210 RRP7BPQ9NSQ0 103 aa18.52■□□□□ 0.56
LINC00339-201ENST00000404210 ADGBQ8N7X0 1667 aa18.52■□□□□ 0.56
LINC00339-201ENST00000404210 ZFYVE16Q7Z3T8 1539 aa18.52■□□□□ 0.56
LINC00339-201ENST00000404210 PCGF6Q9BYE7 350 aa18.5■□□□□ 0.55
LINC00339-201ENST00000404210 PLXNC1O60486 1568 aa18.5■□□□□ 0.55
LINC00339-201ENST00000404210 YEATS2Q9ULM3 1422 aa18.49■□□□□ 0.55
LINC00339-201ENST00000404210 ATP10AO60312 1499 aa18.48■□□□□ 0.55
LINC00339-201ENST00000404210 DHX29Q7Z478 1369 aaKnown RBP18.48■□□□□ 0.55
LINC00339-201ENST00000404210 KIF15Q9NS87 1388 aa18.48■□□□□ 0.55
LINC00339-201ENST00000404210 HFM1A2PYH4 1435 aa18.47■□□□□ 0.55
LINC00339-201ENST00000404210 DUOX2Q9NRD8 1548 aa18.46■□□□□ 0.55
LINC00339-201ENST00000404210 NAIPQ13075 1403 aa18.46■□□□□ 0.55
LINC00339-201ENST00000404210 DIP2CQ9Y2E4 1556 aa18.46■□□□□ 0.55
LINC00339-201ENST00000404210 ABCA6Q8N139 1617 aa18.45■□□□□ 0.54
LINC00339-201ENST00000404210 A2MP01023 1474 aa18.45■□□□□ 0.54
LINC00339-201ENST00000404210 SETD5Q9C0A6 1442 aa18.44■□□□□ 0.54
LINC00339-201ENST00000404210 HRCP23327 699 aa18.43■□□□□ 0.54
LINC00339-201ENST00000404210 ARHGEF40Q8TER5 1519 aa18.43■□□□□ 0.54
LINC00339-201ENST00000404210 ANKRD50Q9ULJ7 1429 aa18.42■□□□□ 0.54
LINC00339-201ENST00000404210 REREQ9P2R6 1566 aa18.42■□□□□ 0.54
LINC00339-201ENST00000404210 ACIN1Q9UKV3 1341 aaKnown RBP18.41■□□□□ 0.54
LINC00339-201ENST00000404210 GCC2Q8IWJ2 1684 aa18.41■□□□□ 0.54
LINC00339-201ENST00000404210 ERBINQ96RT1 1412 aa18.4■□□□□ 0.54
LINC00339-201ENST00000404210 KIF3BO15066 747 aa18.38■□□□□ 0.53
LINC00339-201ENST00000404210 AGLP35573 1532 aa18.37■□□□□ 0.53
LINC00339-201ENST00000404210 RAB3GAP2Q9H2M9 1393 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms