RNA–Protein interactions for RNA: ENST00000403160.4

COPS9-202, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-202ENST00000403160 ADAMTSL3P82987 1691 aa25.39■■□□□ 1.66
COPS9-202ENST00000403160 ARHGAP5Q13017 1502 aa25.37■■□□□ 1.65
COPS9-202ENST00000403160 PTPRMP28827 1452 aa25.36■■□□□ 1.65
COPS9-202ENST00000403160 ILDR1Q86SU0 546 aaPredicted RBP25.36■■□□□ 1.65
COPS9-202ENST00000403160 SCAPERQ9BY12 1400 aa25.35■■□□□ 1.65
COPS9-202ENST00000403160 BCORL1Q5H9F3 1711 aa25.33■■□□□ 1.65
COPS9-202ENST00000403160 ZMYM4Q5VZL5 1548 aa25.32■■□□□ 1.64
COPS9-202ENST00000403160 CDC42BPBQ9Y5S2 1711 aa25.32■■□□□ 1.64
COPS9-202ENST00000403160 POGZQ7Z3K3 1410 aa25.31■■□□□ 1.64
COPS9-202ENST00000403160 PREX2Q70Z35 1606 aa25.31■■□□□ 1.64
COPS9-202ENST00000403160 ARHGEF40Q8TER5 1519 aa25.31■■□□□ 1.64
COPS9-202ENST00000403160 MAGI2Q86UL8 1455 aa25.28■■□□□ 1.64
COPS9-202ENST00000403160 MTUS2Q5JR59 1369 aa25.28■■□□□ 1.64
COPS9-202ENST00000403160 CDC42BPAQ5VT25 1732 aa25.27■■□□□ 1.64
COPS9-202ENST00000403160 VPS8Q8N3P4 1428 aa25.27■■□□□ 1.64
COPS9-202ENST00000403160 ZFYVE16Q7Z3T8 1539 aa25.26■■□□□ 1.63
COPS9-202ENST00000403160 MADDQ8WXG6 1647 aa25.24■■□□□ 1.63
COPS9-202ENST00000403160 ZNF518AQ6AHZ1 1483 aa25.22■■□□□ 1.63
COPS9-202ENST00000403160 YEATS2Q9ULM3 1422 aa25.21■■□□□ 1.63
COPS9-202ENST00000403160 EHBP1L1Q8N3D4 1523 aa25.21■■□□□ 1.63
COPS9-202ENST00000403160 ABCC1P33527 1531 aa25.19■■□□□ 1.62
COPS9-202ENST00000403160 GPATCH8Q9UKJ3 1502 aaKnown RBP25.19■■□□□ 1.62
COPS9-202ENST00000403160 CCNB3Q8WWL7 1395 aa25.18■■□□□ 1.62
COPS9-202ENST00000403160 AFAP1Q8N556 730 aa25.17■■□□□ 1.62
COPS9-202ENST00000403160 KDM5CP41229 1560 aa25.17■■□□□ 1.62
COPS9-202ENST00000403160 ITSN2Q9NZM3 1697 aa25.17■■□□□ 1.62
COPS9-202ENST00000403160 ZNF777Q9ULD5 760 aaPredicted RBP25.16■■□□□ 1.62
COPS9-202ENST00000403160 RIMS1Q86UR5 1692 aaKnown RBP25.15■■□□□ 1.62
COPS9-202ENST00000403160 MYT1LQ9UL68 1186 aa25.14■■□□□ 1.62
COPS9-202ENST00000403160 ARHGEF12Q9NZN5 1544 aa25.13■■□□□ 1.61
COPS9-202ENST00000403160 CFDP1Q9UEE9 299 aaPredicted RBP25.13■■□□□ 1.61
COPS9-202ENST00000403160 ATP10AO60312 1499 aa25.13■■□□□ 1.61
COPS9-202ENST00000403160 TIAM1Q13009 1591 aa25.13■■□□□ 1.61
COPS9-202ENST00000403160 SAMD9LQ8IVG5 1584 aa25.13■■□□□ 1.61
COPS9-202ENST00000403160 TRAPPC8Q9Y2L5 1435 aa25.12■■□□□ 1.61
COPS9-202ENST00000403160 SIGLEC1Q9BZZ2 1709 aa25.1■■□□□ 1.61
COPS9-202ENST00000403160 MLECQ14165 292 aa25.1■■□□□ 1.61
COPS9-202ENST00000403160 C9orf84Q5VXU9 1444 aa25.1■■□□□ 1.61
COPS9-202ENST00000403160 LMTK3Q96Q04 1460 aa25.09■■□□□ 1.61
COPS9-202ENST00000403160 SUPT6HQ7KZ85 1726 aaKnown RBP25.08■■□□□ 1.61
COPS9-202ENST00000403160 MLH3Q9UHC1 1453 aa25.08■■□□□ 1.6
COPS9-202ENST00000403160 SYCP2Q9BX26 1530 aa25.07■■□□□ 1.6
COPS9-202ENST00000403160 PLEKHH2Q8IVE3 1493 aa25.07■■□□□ 1.6
COPS9-202ENST00000403160 PLPPR3Q6T4P5 718 aa25.05■■□□□ 1.6
COPS9-202ENST00000403160 DIP2CQ9Y2E4 1556 aa25.05■■□□□ 1.6
COPS9-202ENST00000403160 KIAA1107Q9UPP5 1409 aa25.04■■□□□ 1.6
COPS9-202ENST00000403160 NCOA2Q15596 1464 aa25.04■■□□□ 1.6
COPS9-202ENST00000403160 HNRNPMP52272 730 aaKnown RBP eCLIP25.04■■□□□ 1.6
COPS9-202ENST00000403160 PPARGC1BQ86YN6 1023 aaKnown RBP25.03■■□□□ 1.6
COPS9-202ENST00000403160 ABCA6Q8N139 1617 aa25.03■■□□□ 1.6
COPS9-202ENST00000403160 LRRC9Q6ZRR7 1453 aa25.02■■□□□ 1.6
COPS9-202ENST00000403160 FBXO41Q8TF61 875 aa25.02■■□□□ 1.6
COPS9-202ENST00000403160 MAP3K1Q13233 1512 aa25.02■■□□□ 1.6
COPS9-202ENST00000403160 FER1L4A9Z1Z3 1794 aa25.01■■□□□ 1.59
COPS9-202ENST00000403160 KIDINS220Q9ULH0 1771 aa25■■□□□ 1.59
COPS9-202ENST00000403160 REREQ9P2R6 1566 aa24.99■■□□□ 1.59
COPS9-202ENST00000403160 SPAG9O60271 1321 aaKnown RBP24.98■■□□□ 1.59
COPS9-202ENST00000403160 HSPA2P54652 639 aa24.98■■□□□ 1.59
COPS9-202ENST00000403160 ZNF644Q9H582 1327 aaPredicted RBP24.97■■□□□ 1.59
COPS9-202ENST00000403160 APLP2Q06481 763 aa24.97■■□□□ 1.59
COPS9-202ENST00000403160 KANK4Q5T7N3 995 aaPredicted RBP24.94■■□□□ 1.58
COPS9-202ENST00000403160 ATP7AQ04656 1500 aa24.93■■□□□ 1.58
COPS9-202ENST00000403160 INO80Q9ULG1 1556 aaPredicted RBP24.92■■□□□ 1.58
COPS9-202ENST00000403160 MBD5Q9P267 1494 aa24.9■■□□□ 1.58
COPS9-202ENST00000403160 AGLP35573 1532 aa24.9■■□□□ 1.58
COPS9-202ENST00000403160 CAMSAP2Q08AD1 1489 aa24.89■■□□□ 1.58
COPS9-202ENST00000403160 CEBPAP49715 358 aaPredicted RBP24.89■■□□□ 1.58
COPS9-202ENST00000403160 TRIM26Q12899 539 aaPredicted RBP24.88■■□□□ 1.57
COPS9-202ENST00000403160 ESF1Q9H501 851 aaKnown RBP24.85■■□□□ 1.57
COPS9-202ENST00000403160 PREX1Q8TCU6 1659 aa24.84■■□□□ 1.57
COPS9-202ENST00000403160 SETD1BQ9UPS6 1966 aaKnown RBP24.84■■□□□ 1.57
COPS9-202ENST00000403160 CCDC141Q6ZP82 1450 aa24.83■■□□□ 1.57
COPS9-202ENST00000403160 RSPH4AQ5TD94 716 aa24.83■■□□□ 1.57
COPS9-202ENST00000403160 MYOM3Q5VTT5 1437 aa24.82■■□□□ 1.56
COPS9-202ENST00000403160 A2MP01023 1474 aa24.82■■□□□ 1.56
COPS9-202ENST00000403160 ADGBQ8N7X0 1667 aa24.81■■□□□ 1.56
COPS9-202ENST00000403160 RTEL1-TNFRSF6BF6WH68 1400 aa24.81■■□□□ 1.56
COPS9-202ENST00000403160 PCGF6Q9BYE7 350 aa24.81■■□□□ 1.56
COPS9-202ENST00000403160 UHRF1BP1Q6BDS2 1440 aa24.79■■□□□ 1.56
COPS9-202ENST00000403160 DMRT2Q9Y5R5 561 aa24.79■■□□□ 1.56
COPS9-202ENST00000403160 PLXNC1O60486 1568 aa24.79■■□□□ 1.56
COPS9-202ENST00000403160 ARHGEF5Q12774 1597 aa24.79■■□□□ 1.56
COPS9-202ENST00000403160 MIA2Q96PC5 1412 aa24.78■■□□□ 1.56
COPS9-202ENST00000403160 CNTLNQ9NXG0 1405 aa24.76■■□□□ 1.55
COPS9-202ENST00000403160 TSPY4P0CV99 314 aa24.74■■□□□ 1.55
COPS9-202ENST00000403160 TSPY10P0CW01 314 aa24.74■■□□□ 1.55
COPS9-202ENST00000403160 CERKQ8TCT0 537 aa24.74■■□□□ 1.55
COPS9-202ENST00000403160 C3P01024 1663 aa24.72■■□□□ 1.55
COPS9-202ENST00000403160 DHX29Q7Z478 1369 aaKnown RBP24.7■■□□□ 1.55
COPS9-202ENST00000403160 GGT6Q6P531 493 aa24.68■■□□□ 1.54
COPS9-202ENST00000403160 PTPN23Q9H3S7 1636 aa24.67■■□□□ 1.54
COPS9-202ENST00000403160 MROH2AA6NES4 1674 aa24.66■■□□□ 1.54
COPS9-202ENST00000403160 MAST1Q9Y2H9 1570 aa24.66■■□□□ 1.54
COPS9-202ENST00000403160 STRCQ7RTU9 1775 aa24.65■■□□□ 1.54
COPS9-202ENST00000403160 CLTCQ00610 1675 aaKnown RBP24.65■■□□□ 1.54
COPS9-202ENST00000403160 FGD6Q6ZV73 1430 aa24.64■■□□□ 1.54
COPS9-202ENST00000403160 ZMYM3Q14202 1370 aa24.64■■□□□ 1.53
COPS9-202ENST00000403160 PPP6R1Q9UPN7 881 aa24.63■■□□□ 1.53
COPS9-202ENST00000403160 NPATQ14207 1427 aa24.62■■□□□ 1.53
COPS9-202ENST00000403160 KIF3BO15066 747 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms