RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 KDM6BO15054 1643 aa9.5□□□□□ -0.89
HMGB1P20-201ENST00000402555 MAP3K4Q9Y6R4 1608 aa9.49□□□□□ -0.89
HMGB1P20-201ENST00000402555 MKRN4PQ13434 485 aaPredicted RBP9.49□□□□□ -0.89
HMGB1P20-201ENST00000402555 EFCAB5A4FU69 1503 aa9.49□□□□□ -0.89
HMGB1P20-201ENST00000402555 NUP153P49790 1475 aaKnown RBP9.48□□□□□ -0.89
HMGB1P20-201ENST00000402555 SPDYE2BA6NHP3 402 aa9.47□□□□□ -0.89
HMGB1P20-201ENST00000402555 SPDYE6P0CI01 402 aa9.47□□□□□ -0.89
HMGB1P20-201ENST00000402555 SPDYE2Q495Y8 402 aa9.47□□□□□ -0.89
HMGB1P20-201ENST00000402555 ARHGAP35Q9NRY4 1499 aa9.47□□□□□ -0.89
HMGB1P20-201ENST00000402555 CD109Q6YHK3 1445 aa9.45□□□□□ -0.9
HMGB1P20-201ENST00000402555 COL17A1Q9UMD9 1497 aaPredicted RBP9.45□□□□□ -0.9
HMGB1P20-201ENST00000402555 TEX14Q8IWB6 1497 aa9.44□□□□□ -0.9
HMGB1P20-201ENST00000402555 CFAP43Q8NDM7 1665 aa9.44□□□□□ -0.9
HMGB1P20-201ENST00000402555 CDK13Q14004 1512 aaKnown RBP9.43□□□□□ -0.9
HMGB1P20-201ENST00000402555 ATP1B4Q9UN42 357 aaPredicted RBP9.43□□□□□ -0.9
HMGB1P20-201ENST00000402555 MAGI3Q5TCQ9 1506 aa9.41□□□□□ -0.9
HMGB1P20-201ENST00000402555 PITPNM1O00562 1244 aa9.41□□□□□ -0.9
HMGB1P20-201ENST00000402555 ABCA9Q8IUA7 1624 aa9.41□□□□□ -0.9
HMGB1P20-201ENST00000402555 FMN1Q68DA7 1419 aa9.4□□□□□ -0.9
HMGB1P20-201ENST00000402555 PLEKHD1A6NEE1 506 aa9.39□□□□□ -0.91
HMGB1P20-201ENST00000402555 HECW1Q76N89 1606 aa9.38□□□□□ -0.91
HMGB1P20-201ENST00000402555 LRRIQ1Q96JM4 1722 aa9.37□□□□□ -0.91
HMGB1P20-201ENST00000402555 SSUH2Q9Y2M2 353 aa9.37□□□□□ -0.91
HMGB1P20-201ENST00000402555 CLIP1P30622 1438 aa9.37□□□□□ -0.91
HMGB1P20-201ENST00000402555 PCF11O94913 1555 aaKnown RBP9.37□□□□□ -0.91
HMGB1P20-201ENST00000402555 PIP4P2Q8N4L2 257 aa9.36□□□□□ -0.91
HMGB1P20-201ENST00000402555 TTC37Q6PGP7 1564 aa9.36□□□□□ -0.91
HMGB1P20-201ENST00000402555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.36□□□□□ -0.91
HMGB1P20-201ENST00000402555 KDM4FA0A1W2PPD8 638 aa9.35□□□□□ -0.91
HMGB1P20-201ENST00000402555 CASKIN1Q8WXD9 1431 aa9.34□□□□□ -0.91
HMGB1P20-201ENST00000402555 FXR2P51116 673 aaKnown RBP eCLIP9.34□□□□□ -0.91
HMGB1P20-201ENST00000402555 ZNF692Q9BU19 519 aaPredicted RBP9.34□□□□□ -0.91
HMGB1P20-201ENST00000402555 ARAP3Q8WWN8 1544 aa9.34□□□□□ -0.91
HMGB1P20-201ENST00000402555 RAPGEF3O95398 923 aa9.33□□□□□ -0.92
HMGB1P20-201ENST00000402555 KIF14Q15058 1648 aa9.33□□□□□ -0.92
HMGB1P20-201ENST00000402555 NEO1Q92859 1461 aa9.33□□□□□ -0.92
HMGB1P20-201ENST00000402555 LOC105371045A0A1W2PR82 267 aa9.32□□□□□ -0.92
HMGB1P20-201ENST00000402555 TROQ12816 1431 aaPredicted RBP9.31□□□□□ -0.92
HMGB1P20-201ENST00000402555 CDK11AQ9UQ88 783 aaPredicted RBP9.31□□□□□ -0.92
HMGB1P20-201ENST00000402555 FANCAO15360 1455 aa9.31□□□□□ -0.92
HMGB1P20-201ENST00000402555 ADGRL1O94910 1474 aa9.31□□□□□ -0.92
HMGB1P20-201ENST00000402555 FRMPD1Q5SYB0 1578 aa9.31□□□□□ -0.92
HMGB1P20-201ENST00000402555 CEP162Q5TB80 1403 aa9.31□□□□□ -0.92
HMGB1P20-201ENST00000402555 AKNAQ7Z591 1439 aa9.31□□□□□ -0.92
HMGB1P20-201ENST00000402555 FYCO1Q9BQS8 1478 aa9.3□□□□□ -0.92
HMGB1P20-201ENST00000402555 PHLDB1Q86UU1 1377 aa9.3□□□□□ -0.92
HMGB1P20-201ENST00000402555 CCDC18Q5T9S5 1454 aa9.29□□□□□ -0.92
HMGB1P20-201ENST00000402555 PLCH2O75038 1416 aa9.29□□□□□ -0.92
HMGB1P20-201ENST00000402555 DENND4BO75064 1496 aaPredicted RBP9.28□□□□□ -0.92
HMGB1P20-201ENST00000402555 MYO5CQ9NQX4 1742 aa9.28□□□□□ -0.92
HMGB1P20-201ENST00000402555 CFAP74Q9C0B2 1584 aa9.28□□□□□ -0.92
HMGB1P20-201ENST00000402555 SPDYE1Q8NFV5 336 aaPredicted RBP9.27□□□□□ -0.93
HMGB1P20-201ENST00000402555 RICTORQ6R327 1708 aa9.27□□□□□ -0.93
HMGB1P20-201ENST00000402555 SCAPERQ9BY12 1400 aa9.26□□□□□ -0.93
HMGB1P20-201ENST00000402555 ARHGAP5Q13017 1502 aa9.26□□□□□ -0.93
HMGB1P20-201ENST00000402555 EFCAB2Q5VUJ9 269 aa9.25□□□□□ -0.93
HMGB1P20-201ENST00000402555 CDC42BPBQ9Y5S2 1711 aa9.24□□□□□ -0.93
HMGB1P20-201ENST00000402555 POGZQ7Z3K3 1410 aa9.23□□□□□ -0.93
HMGB1P20-201ENST00000402555 YEATS2Q9ULM3 1422 aa9.23□□□□□ -0.93
HMGB1P20-201ENST00000402555 ARHGEF40Q8TER5 1519 aa9.23□□□□□ -0.93
HMGB1P20-201ENST00000402555 PREX2Q70Z35 1606 aa9.23□□□□□ -0.93
HMGB1P20-201ENST00000402555 CDC42BPAQ5VT25 1732 aa9.22□□□□□ -0.93
HMGB1P20-201ENST00000402555 ZMYM4Q5VZL5 1548 aa9.22□□□□□ -0.93
HMGB1P20-201ENST00000402555 ZFYVE16Q7Z3T8 1539 aa9.22□□□□□ -0.93
HMGB1P20-201ENST00000402555 ARID4BQ4LE39 1312 aaPredicted RBP9.22□□□□□ -0.93
HMGB1P20-201ENST00000402555 AFAP1Q8N556 730 aa9.21□□□□□ -0.94
HMGB1P20-201ENST00000402555 CLEC11AQ9Y240 323 aa9.21□□□□□ -0.94
HMGB1P20-201ENST00000402555 MTUS2Q5JR59 1369 aa9.21□□□□□ -0.94
HMGB1P20-201ENST00000402555 ARHGEF12Q9NZN5 1544 aa9.21□□□□□ -0.94
HMGB1P20-201ENST00000402555 SIGLEC1Q9BZZ2 1709 aa9.2□□□□□ -0.94
HMGB1P20-201ENST00000402555 ZNF777Q9ULD5 760 aaPredicted RBP9.2□□□□□ -0.94
HMGB1P20-201ENST00000402555 GPATCH8Q9UKJ3 1502 aaKnown RBP9.2□□□□□ -0.94
HMGB1P20-201ENST00000402555 TRAPPC8Q9Y2L5 1435 aa9.19□□□□□ -0.94
HMGB1P20-201ENST00000402555 ABCC1P33527 1531 aa9.19□□□□□ -0.94
HMGB1P20-201ENST00000402555 ADAMTSL3P82987 1691 aa9.19□□□□□ -0.94
HMGB1P20-201ENST00000402555 BCORL1Q5H9F3 1711 aa9.19□□□□□ -0.94
HMGB1P20-201ENST00000402555 ZNF518AQ6AHZ1 1483 aa9.18□□□□□ -0.94
HMGB1P20-201ENST00000402555 MAGI2Q86UL8 1455 aa9.18□□□□□ -0.94
HMGB1P20-201ENST00000402555 SAMD9LQ8IVG5 1584 aa9.18□□□□□ -0.94
HMGB1P20-201ENST00000402555 EHBP1L1Q8N3D4 1523 aa9.18□□□□□ -0.94
HMGB1P20-201ENST00000402555 VPS8Q8N3P4 1428 aa9.18□□□□□ -0.94
HMGB1P20-201ENST00000402555 CCNB3Q8WWL7 1395 aa9.18□□□□□ -0.94
HMGB1P20-201ENST00000402555 MADDQ8WXG6 1647 aa9.18□□□□□ -0.94
HMGB1P20-201ENST00000402555 ITSN2Q9NZM3 1697 aa9.18□□□□□ -0.94
HMGB1P20-201ENST00000402555 MYT1LQ9UL68 1186 aa9.18□□□□□ -0.94
HMGB1P20-201ENST00000402555 KDM5CP41229 1560 aa9.17□□□□□ -0.94
HMGB1P20-201ENST00000402555 MLECQ14165 292 aa9.17□□□□□ -0.94
HMGB1P20-201ENST00000402555 SP7Q8TDD2 431 aaPredicted RBP9.17□□□□□ -0.94
HMGB1P20-201ENST00000402555 TIAM1Q13009 1591 aa9.16□□□□□ -0.94
HMGB1P20-201ENST00000402555 SYCP2Q9BX26 1530 aa9.16□□□□□ -0.94
HMGB1P20-201ENST00000402555 HNRNPMP52272 730 aaKnown RBP eCLIP9.16□□□□□ -0.94
HMGB1P20-201ENST00000402555 CFDP1Q9UEE9 299 aaPredicted RBP9.16□□□□□ -0.94
HMGB1P20-201ENST00000402555 HECW2Q9P2P5 1572 aa9.16□□□□□ -0.94
HMGB1P20-201ENST00000402555 ATP10AO60312 1499 aa9.15□□□□□ -0.94
HMGB1P20-201ENST00000402555 PTPRMP28827 1452 aa9.15□□□□□ -0.94
HMGB1P20-201ENST00000402555 ZNF644Q9H582 1327 aaPredicted RBP9.15□□□□□ -0.94
HMGB1P20-201ENST00000402555 PRKAR2AP13861 404 aaKnown RBP9.15□□□□□ -0.94
HMGB1P20-201ENST00000402555 RIMS1Q86UR5 1692 aaKnown RBP9.15□□□□□ -0.94
HMGB1P20-201ENST00000402555 ABCA6Q8N139 1617 aa9.15□□□□□ -0.94
HMGB1P20-201ENST00000402555 DIP2CQ9Y2E4 1556 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms