RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 TRIM26Q12899 539 aaPredicted RBP9.29□□□□□ -0.92
CLIP4-202ENST00000401605 MAPK8IP2Q13387 824 aaPredicted RBP9.29□□□□□ -0.92
CLIP4-202ENST00000401605 KDM6BO15054 1643 aa9.29□□□□□ -0.92
CLIP4-202ENST00000401605 RNF216Q9NWF9 866 aaPredicted RBP9.28□□□□□ -0.92
CLIP4-202ENST00000401605 WDR7Q9Y4E6 1490 aa9.28□□□□□ -0.92
CLIP4-202ENST00000401605 ATF5Q9Y2D1 282 aaPredicted RBP9.28□□□□□ -0.92
CLIP4-202ENST00000401605 UBTFP17480 764 aaKnown RBP9.27□□□□□ -0.92
CLIP4-202ENST00000401605 P3H3Q8IVL6 736 aa9.27□□□□□ -0.93
CLIP4-202ENST00000401605 TEX14Q8IWB6 1497 aa9.26□□□□□ -0.93
CLIP4-202ENST00000401605 ABCA8O94911 1581 aa9.26□□□□□ -0.93
CLIP4-202ENST00000401605 KCNH8Q96L42 1107 aa9.25□□□□□ -0.93
CLIP4-202ENST00000401605 ZCCHC11Q5TAX3 1644 aaKnown RBP9.25□□□□□ -0.93
CLIP4-202ENST00000401605 SPRYD3Q8NCJ5 442 aa9.25□□□□□ -0.93
CLIP4-202ENST00000401605 CTTNBP2Q8WZ74 1663 aa9.24□□□□□ -0.93
CLIP4-202ENST00000401605 KDM4FA0A1W2PPD8 638 aa9.23□□□□□ -0.93
CLIP4-202ENST00000401605 CD109Q6YHK3 1445 aa9.23□□□□□ -0.93
CLIP4-202ENST00000401605 COL17A1Q9UMD9 1497 aaPredicted RBP9.23□□□□□ -0.93
CLIP4-202ENST00000401605 ARID3CA6NKF2 412 aa9.22□□□□□ -0.93
CLIP4-202ENST00000401605 MAGI3Q5TCQ9 1506 aa9.22□□□□□ -0.93
CLIP4-202ENST00000401605 ATP10BO94823 1461 aa9.22□□□□□ -0.93
CLIP4-202ENST00000401605 MAP3K4Q9Y6R4 1608 aa9.21□□□□□ -0.94
CLIP4-202ENST00000401605 TSPOAP1O95153 1857 aa9.2□□□□□ -0.94
CLIP4-202ENST00000401605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.2□□□□□ -0.94
CLIP4-202ENST00000401605 HNRNPUL2Q1KMD3 747 aaKnown RBP9.2□□□□□ -0.94
CLIP4-202ENST00000401605 PPRC1Q5VV67 1664 aaKnown RBP9.2□□□□□ -0.94
CLIP4-202ENST00000401605 SAMD9Q5K651 1589 aa9.19□□□□□ -0.94
CLIP4-202ENST00000401605 FHOD3Q2V2M9 1422 aa9.18□□□□□ -0.94
CLIP4-202ENST00000401605 PHLDB1Q86UU1 1377 aa9.17□□□□□ -0.94
CLIP4-202ENST00000401605 NUP153P49790 1475 aaKnown RBP9.16□□□□□ -0.94
CLIP4-202ENST00000401605 PLEKHD1A6NEE1 506 aa9.16□□□□□ -0.94
CLIP4-202ENST00000401605 KIF21BO75037 1637 aa9.15□□□□□ -0.94
CLIP4-202ENST00000401605 ADGRL1O94910 1474 aa9.15□□□□□ -0.94
CLIP4-202ENST00000401605 RAPGEF6Q8TEU7 1601 aa9.14□□□□□ -0.95
CLIP4-202ENST00000401605 EFCAB5A4FU69 1503 aa9.14□□□□□ -0.95
CLIP4-202ENST00000401605 CFAP43Q8NDM7 1665 aa9.14□□□□□ -0.95
CLIP4-202ENST00000401605 ECM2O94769 699 aaPredicted RBP9.14□□□□□ -0.95
CLIP4-202ENST00000401605 ANP32EQ9BTT0 268 aa9.14□□□□□ -0.95
CLIP4-202ENST00000401605 ARAP3Q8WWN8 1544 aa9.13□□□□□ -0.95
CLIP4-202ENST00000401605 NEO1Q92859 1461 aa9.12□□□□□ -0.95
CLIP4-202ENST00000401605 RGL2O15211 777 aa9.11□□□□□ -0.95
CLIP4-202ENST00000401605 RAPGEF3O95398 923 aa9.11□□□□□ -0.95
CLIP4-202ENST00000401605 FMN1Q68DA7 1419 aa9.11□□□□□ -0.95
CLIP4-202ENST00000401605 ABCA9Q8IUA7 1624 aa9.1□□□□□ -0.95
CLIP4-202ENST00000401605 MSH5O43196 834 aa9.1□□□□□ -0.95
CLIP4-202ENST00000401605 PKNOX2Q96KN3 472 aa9.1□□□□□ -0.95
CLIP4-202ENST00000401605 SPDYE4A6NLX3 237 aa9.09□□□□□ -0.95
CLIP4-202ENST00000401605 ATP1B4Q9UN42 357 aaPredicted RBP9.09□□□□□ -0.95
CLIP4-202ENST00000401605 CDK11AQ9UQ88 783 aaPredicted RBP9.09□□□□□ -0.95
CLIP4-202ENST00000401605 ARHGAP35Q9NRY4 1499 aa9.08□□□□□ -0.96
CLIP4-202ENST00000401605 PROM2Q8N271 834 aa9.07□□□□□ -0.96
CLIP4-202ENST00000401605 NEFLP07196 543 aa9.06□□□□□ -0.96
CLIP4-202ENST00000401605 PDIA4P13667 645 aaKnown RBP9.06□□□□□ -0.96
CLIP4-202ENST00000401605 FANCAO15360 1455 aa9.06□□□□□ -0.96
CLIP4-202ENST00000401605 DENND4BO75064 1496 aaPredicted RBP9.06□□□□□ -0.96
CLIP4-202ENST00000401605 AKNAQ7Z591 1439 aa9.06□□□□□ -0.96
CLIP4-202ENST00000401605 CDK13Q14004 1512 aaKnown RBP9.05□□□□□ -0.96
CLIP4-202ENST00000401605 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.05□□□□□ -0.96
CLIP4-202ENST00000401605 ARID4BQ4LE39 1312 aaPredicted RBP9.04□□□□□ -0.96
CLIP4-202ENST00000401605 PLCH2O75038 1416 aa9.04□□□□□ -0.96
CLIP4-202ENST00000401605 BRPF1P55201 1214 aaPredicted RBP9.03□□□□□ -0.96
CLIP4-202ENST00000401605 EFCAB2Q5VUJ9 269 aa9.03□□□□□ -0.96
CLIP4-202ENST00000401605 HECW1Q76N89 1606 aa9.02□□□□□ -0.97
CLIP4-202ENST00000401605 CLIP1P30622 1438 aa9.01□□□□□ -0.97
CLIP4-202ENST00000401605 TROQ12816 1431 aaPredicted RBP9.01□□□□□ -0.97
CLIP4-202ENST00000401605 CHGAP10645 457 aaKnown RBP9.01□□□□□ -0.97
CLIP4-202ENST00000401605 SCAPERQ9BY12 1400 aa9.01□□□□□ -0.97
CLIP4-202ENST00000401605 FRMPD1Q5SYB0 1578 aa9□□□□□ -0.97
CLIP4-202ENST00000401605 TTC37Q6PGP7 1564 aa9□□□□□ -0.97
CLIP4-202ENST00000401605 MAGI2Q86UL8 1455 aa9□□□□□ -0.97
CLIP4-202ENST00000401605 CFAP74Q9C0B2 1584 aa8.99□□□□□ -0.97
CLIP4-202ENST00000401605 CASKIN1Q8WXD9 1431 aa8.99□□□□□ -0.97
CLIP4-202ENST00000401605 POGZQ7Z3K3 1410 aa8.99□□□□□ -0.97
CLIP4-202ENST00000401605 PTPRMP28827 1452 aa8.99□□□□□ -0.97
CLIP4-202ENST00000401605 ARHGEF40Q8TER5 1519 aa8.98□□□□□ -0.97
CLIP4-202ENST00000401605 ZMYM4Q5VZL5 1548 aa8.98□□□□□ -0.97
CLIP4-202ENST00000401605 HOXD11P31277 338 aaPredicted RBP8.98□□□□□ -0.97
CLIP4-202ENST00000401605 ANO8Q9HCE9 1232 aaPredicted RBP8.98□□□□□ -0.97
CLIP4-202ENST00000401605 HECW2Q9P2P5 1572 aa8.98□□□□□ -0.97
CLIP4-202ENST00000401605 YEATS2Q9ULM3 1422 aa8.97□□□□□ -0.97
CLIP4-202ENST00000401605 CCDC18Q5T9S5 1454 aa8.97□□□□□ -0.97
CLIP4-202ENST00000401605 PDE4CQ08493 712 aa8.97□□□□□ -0.97
CLIP4-202ENST00000401605 ZFYVE16Q7Z3T8 1539 aa8.96□□□□□ -0.97
CLIP4-202ENST00000401605 KIF14Q15058 1648 aa8.96□□□□□ -0.98
CLIP4-202ENST00000401605 ZNF518AQ6AHZ1 1483 aa8.95□□□□□ -0.98
CLIP4-202ENST00000401605 AFAP1Q8N556 730 aa8.95□□□□□ -0.98
CLIP4-202ENST00000401605 ADAMTSL3P82987 1691 aa8.95□□□□□ -0.98
CLIP4-202ENST00000401605 ARHGAP5Q13017 1502 aa8.95□□□□□ -0.98
CLIP4-202ENST00000401605 FYCO1Q9BQS8 1478 aa8.94□□□□□ -0.98
CLIP4-202ENST00000401605 ACIN1Q9UKV3 1341 aaKnown RBP8.94□□□□□ -0.98
CLIP4-202ENST00000401605 ATP10AO60312 1499 aa8.94□□□□□ -0.98
CLIP4-202ENST00000401605 RICTORQ6R327 1708 aa8.94□□□□□ -0.98
CLIP4-202ENST00000401605 C9orf84Q5VXU9 1444 aa8.93□□□□□ -0.98
CLIP4-202ENST00000401605 MLECQ14165 292 aa8.93□□□□□ -0.98
CLIP4-202ENST00000401605 MYT1LQ9UL68 1186 aa8.93□□□□□ -0.98
CLIP4-202ENST00000401605 PCF11O94913 1555 aaKnown RBP8.93□□□□□ -0.98
CLIP4-202ENST00000401605 SPOCK2Q92563 424 aa8.92□□□□□ -0.98
CLIP4-202ENST00000401605 BCORL1Q5H9F3 1711 aa8.92□□□□□ -0.98
CLIP4-202ENST00000401605 ILDR1Q86SU0 546 aaPredicted RBP8.91□□□□□ -0.98
CLIP4-202ENST00000401605 MADDQ8WXG6 1647 aa8.91□□□□□ -0.98
CLIP4-202ENST00000401605 ARID3AQ99856 593 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms