RNA–Protein interactions for RNA: ENST00000400940.3

RFKP1-201, Transcript of riboflavin kinase pseudogene 1, humanhuman

BASIC

Gene RFKP1, Length 428 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFKP1-201ENST00000400940 LMTK3Q96Q04 1460 aa13.88□□□□□ -0.19
RFKP1-201ENST00000400940 ILDR1Q86SU0 546 aaPredicted RBP13.88□□□□□ -0.19
RFKP1-201ENST00000400940 FMN1Q68DA7 1419 aa13.88□□□□□ -0.19
RFKP1-201ENST00000400940 REREQ9P2R6 1566 aa13.88□□□□□ -0.19
RFKP1-201ENST00000400940 KDM5CP41229 1560 aa13.87□□□□□ -0.19
RFKP1-201ENST00000400940 POGZQ7Z3K3 1410 aa13.86□□□□□ -0.19
RFKP1-201ENST00000400940 KIF14Q15058 1648 aa13.86□□□□□ -0.19
RFKP1-201ENST00000400940 LRRIQ1Q96JM4 1722 aa13.85□□□□□ -0.19
RFKP1-201ENST00000400940 CDK13Q14004 1512 aaKnown RBP13.85□□□□□ -0.19
RFKP1-201ENST00000400940 PLCH2O75038 1416 aa13.84□□□□□ -0.19
RFKP1-201ENST00000400940 HOXD11P31277 338 aaPredicted RBP13.84□□□□□ -0.19
RFKP1-201ENST00000400940 PLEKHD1A6NEE1 506 aa13.83□□□□□ -0.2
RFKP1-201ENST00000400940 RAPGEF3O95398 923 aa13.83□□□□□ -0.2
RFKP1-201ENST00000400940 P3H3Q8IVL6 736 aa13.83□□□□□ -0.2
RFKP1-201ENST00000400940 ARHGEF12Q9NZN5 1544 aa13.83□□□□□ -0.2
RFKP1-201ENST00000400940 SETD1BQ9UPS6 1966 aaKnown RBP13.83□□□□□ -0.2
RFKP1-201ENST00000400940 PREX1Q8TCU6 1659 aa13.82□□□□□ -0.2
RFKP1-201ENST00000400940 ARHGAP35Q9NRY4 1499 aa13.82□□□□□ -0.2
RFKP1-201ENST00000400940 PREX2Q70Z35 1606 aa13.81□□□□□ -0.2
RFKP1-201ENST00000400940 ZNF518AQ6AHZ1 1483 aa13.8□□□□□ -0.2
RFKP1-201ENST00000400940 CDC42BPBQ9Y5S2 1711 aa13.79□□□□□ -0.2
RFKP1-201ENST00000400940 C1QBPQ07021 282 aaKnown RBP13.79□□□□□ -0.2
RFKP1-201ENST00000400940 TROQ12816 1431 aaPredicted RBP13.78□□□□□ -0.2
RFKP1-201ENST00000400940 C9orf84Q5VXU9 1444 aa13.78□□□□□ -0.2
RFKP1-201ENST00000400940 YEATS2Q9ULM3 1422 aa13.78□□□□□ -0.2
RFKP1-201ENST00000400940 ARID3CA6NKF2 412 aa13.77□□□□□ -0.21
RFKP1-201ENST00000400940 CCDC18Q5T9S5 1454 aa13.77□□□□□ -0.21
RFKP1-201ENST00000400940 ATP10AO60312 1499 aa13.76□□□□□ -0.21
RFKP1-201ENST00000400940 ITSN2Q9NZM3 1697 aa13.75□□□□□ -0.21
RFKP1-201ENST00000400940 DIP2CQ9Y2E4 1556 aa13.75□□□□□ -0.21
RFKP1-201ENST00000400940 ABCC1P33527 1531 aa13.74□□□□□ -0.21
RFKP1-201ENST00000400940 AGLP35573 1532 aa13.74□□□□□ -0.21
RFKP1-201ENST00000400940 SCAPERQ9BY12 1400 aa13.74□□□□□ -0.21
RFKP1-201ENST00000400940 CDC42BPAQ5VT25 1732 aa13.74□□□□□ -0.21
RFKP1-201ENST00000400940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.74□□□□□ -0.21
RFKP1-201ENST00000400940 HNRNPUL2Q1KMD3 747 aaKnown RBP13.74□□□□□ -0.21
RFKP1-201ENST00000400940 FBXO41Q8TF61 875 aa13.74□□□□□ -0.21
RFKP1-201ENST00000400940 MLH3Q9UHC1 1453 aa13.74□□□□□ -0.21
RFKP1-201ENST00000400940 CLIP1P30622 1438 aa13.73□□□□□ -0.21
RFKP1-201ENST00000400940 ABCA6Q8N139 1617 aa13.72□□□□□ -0.21
RFKP1-201ENST00000400940 MROH2AA6NES4 1674 aa13.72□□□□□ -0.21
RFKP1-201ENST00000400940 ARHGAP5Q13017 1502 aa13.71□□□□□ -0.21
RFKP1-201ENST00000400940 CDK11AQ9UQ88 783 aaPredicted RBP13.71□□□□□ -0.21
RFKP1-201ENST00000400940 CASKIN1Q8WXD9 1431 aa13.71□□□□□ -0.22
RFKP1-201ENST00000400940 FYCO1Q9BQS8 1478 aa13.7□□□□□ -0.22
RFKP1-201ENST00000400940 KIDINS220Q9ULH0 1771 aa13.69□□□□□ -0.22
RFKP1-201ENST00000400940 EFCAB2Q5VUJ9 269 aa13.69□□□□□ -0.22
RFKP1-201ENST00000400940 C3P01024 1663 aa13.69□□□□□ -0.22
RFKP1-201ENST00000400940 STRCQ7RTU9 1775 aa13.68□□□□□ -0.22
RFKP1-201ENST00000400940 ARID4BQ4LE39 1312 aaPredicted RBP13.68□□□□□ -0.22
RFKP1-201ENST00000400940 PPP4R3CPQ6ZMV5 832 aa13.68□□□□□ -0.22
RFKP1-201ENST00000400940 PLXNC1O60486 1568 aa13.64□□□□□ -0.23
RFKP1-201ENST00000400940 INO80Q9ULG1 1556 aaPredicted RBP13.63□□□□□ -0.23
RFKP1-201ENST00000400940 CNTLNQ9NXG0 1405 aa13.63□□□□□ -0.23
RFKP1-201ENST00000400940 ZNF142P52746 1687 aaPredicted RBP13.63□□□□□ -0.23
RFKP1-201ENST00000400940 SAMD9LQ8IVG5 1584 aa13.62□□□□□ -0.23
RFKP1-201ENST00000400940 RNF216Q9NWF9 866 aaPredicted RBP13.61□□□□□ -0.23
RFKP1-201ENST00000400940 UHRF1BP1Q6BDS2 1440 aa13.6□□□□□ -0.23
RFKP1-201ENST00000400940 IQSEC2Q5JU85 1478 aa13.6□□□□□ -0.23
RFKP1-201ENST00000400940 PLEKHH2Q8IVE3 1493 aa13.6□□□□□ -0.23
RFKP1-201ENST00000400940 NPATQ14207 1427 aa13.59□□□□□ -0.23
RFKP1-201ENST00000400940 KIAA1107Q9UPP5 1409 aa13.59□□□□□ -0.23
RFKP1-201ENST00000400940 UBTFP17480 764 aaKnown RBP13.59□□□□□ -0.23
RFKP1-201ENST00000400940 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
RFKP1-201ENST00000400940 ADGBQ8N7X0 1667 aa13.59□□□□□ -0.23
RFKP1-201ENST00000400940 FAM135AQ9P2D6 1515 aa13.58□□□□□ -0.24
RFKP1-201ENST00000400940 PTPRTO14522 1441 aa13.57□□□□□ -0.24
RFKP1-201ENST00000400940 TRAPPC8Q9Y2L5 1435 aa13.57□□□□□ -0.24
RFKP1-201ENST00000400940 RANGAP1P46060 587 aaPredicted RBP13.57□□□□□ -0.24
RFKP1-201ENST00000400940 ATP7AQ04656 1500 aa13.56□□□□□ -0.24
RFKP1-201ENST00000400940 SYCP2Q9BX26 1530 aa13.56□□□□□ -0.24
RFKP1-201ENST00000400940 GPATCH8Q9UKJ3 1502 aaKnown RBP13.55□□□□□ -0.24
RFKP1-201ENST00000400940 HSPA2P54652 639 aa13.53□□□□□ -0.24
RFKP1-201ENST00000400940 EHBP1L1Q8N3D4 1523 aa13.53□□□□□ -0.24
RFKP1-201ENST00000400940 MYO3AQ8NEV4 1616 aa13.53□□□□□ -0.24
RFKP1-201ENST00000400940 AFAP1Q8N556 730 aa13.52□□□□□ -0.25
RFKP1-201ENST00000400940 NCOA1Q15788 1441 aa13.52□□□□□ -0.25
RFKP1-201ENST00000400940 SUPT6HQ7KZ85 1726 aaKnown RBP13.51□□□□□ -0.25
RFKP1-201ENST00000400940 LTBP4Q8N2S1 1624 aa13.51□□□□□ -0.25
RFKP1-201ENST00000400940 TIAM1Q13009 1591 aa13.51□□□□□ -0.25
RFKP1-201ENST00000400940 PLA2R1Q13018 1463 aa13.51□□□□□ -0.25
RFKP1-201ENST00000400940 CERKQ8TCT0 537 aa13.5□□□□□ -0.25
RFKP1-201ENST00000400940 CLTCQ00610 1675 aaKnown RBP13.5□□□□□ -0.25
RFKP1-201ENST00000400940 MLECQ14165 292 aa13.48□□□□□ -0.25
RFKP1-201ENST00000400940 CEP170BQ9Y4F5 1589 aaPredicted RBP13.47□□□□□ -0.25
RFKP1-201ENST00000400940 A2MP01023 1474 aa13.47□□□□□ -0.25
RFKP1-201ENST00000400940 RTEL1-TNFRSF6BF6WH68 1400 aa13.47□□□□□ -0.25
RFKP1-201ENST00000400940 TCOF1Q13428 1488 aaKnown RBP13.46□□□□□ -0.25
RFKP1-201ENST00000400940 CEP162Q5TB80 1403 aa13.46□□□□□ -0.26
RFKP1-201ENST00000400940 POLR1AO95602 1720 aaPredicted RBP13.45□□□□□ -0.26
RFKP1-201ENST00000400940 MBD5Q9P267 1494 aa13.45□□□□□ -0.26
RFKP1-201ENST00000400940 ATP1B4Q9UN42 357 aaPredicted RBP13.45□□□□□ -0.26
RFKP1-201ENST00000400940 CAMSAP1Q5T5Y3 1602 aa13.45□□□□□ -0.26
RFKP1-201ENST00000400940 ARHGEF5Q12774 1597 aa13.43□□□□□ -0.26
RFKP1-201ENST00000400940 PTPRKQ15262 1439 aa13.42□□□□□ -0.26
RFKP1-201ENST00000400940 CEBPAP49715 358 aaPredicted RBP13.42□□□□□ -0.26
RFKP1-201ENST00000400940 ZC3H13Q5T200 1668 aaKnown RBP13.42□□□□□ -0.26
RFKP1-201ENST00000400940 SPAG9O60271 1321 aaKnown RBP13.41□□□□□ -0.26
RFKP1-201ENST00000400940 ZMYM3Q14202 1370 aa13.41□□□□□ -0.26
RFKP1-201ENST00000400940 CCNB3Q8WWL7 1395 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms