RNA–Protein interactions for RNA: ENST00000400306.2

LINC02408-201, Transcript of long intergenic non-protein coding RNA 2408, humanhuman

TSL 2 BASIC

Gene LINC02408, Length 1,766 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02408-201ENST00000400306 SOCS7O14512 581 aa12.43□□□□□ -0.42
LINC02408-201ENST00000400306 PTPRGP23470 1445 aa12.41□□□□□ -0.42
LINC02408-201ENST00000400306 PCF11O94913 1555 aaKnown RBP12.4□□□□□ -0.42
LINC02408-201ENST00000400306 EPRSP07814 1512 aaKnown RBP12.4□□□□□ -0.42
LINC02408-201ENST00000400306 ILDR2Q71H61 639 aa12.38□□□□□ -0.43
LINC02408-201ENST00000400306 ZCCHC11Q5TAX3 1644 aaKnown RBP12.38□□□□□ -0.43
LINC02408-201ENST00000400306 RAPGEF6Q8TEU7 1601 aa12.38□□□□□ -0.43
LINC02408-201ENST00000400306 UHRF1BP1LA0JNW5 1464 aa12.37□□□□□ -0.43
LINC02408-201ENST00000400306 ABCA8O94911 1581 aa12.37□□□□□ -0.43
LINC02408-201ENST00000400306 LRRIQ1Q96JM4 1722 aa12.37□□□□□ -0.43
LINC02408-201ENST00000400306 DISP3Q9P2K9 1392 aa12.36□□□□□ -0.43
LINC02408-201ENST00000400306 FMN1Q68DA7 1419 aa12.36□□□□□ -0.43
LINC02408-201ENST00000400306 VPS8Q8N3P4 1428 aa12.36□□□□□ -0.43
LINC02408-201ENST00000400306 ADAMTSL3P82987 1691 aa12.36□□□□□ -0.43
LINC02408-201ENST00000400306 ARID3CA6NKF2 412 aa12.35□□□□□ -0.43
LINC02408-201ENST00000400306 AKT1S1Q96B36 256 aa12.35□□□□□ -0.43
LINC02408-201ENST00000400306 ATP1B4Q9UN42 357 aaPredicted RBP12.35□□□□□ -0.43
LINC02408-201ENST00000400306 CFAP43Q8NDM7 1665 aa12.35□□□□□ -0.43
LINC02408-201ENST00000400306 UACAQ9BZF9 1416 aa12.34□□□□□ -0.43
LINC02408-201ENST00000400306 HECW1Q76N89 1606 aa12.33□□□□□ -0.44
LINC02408-201ENST00000400306 MKRN4PQ13434 485 aaPredicted RBP12.33□□□□□ -0.44
LINC02408-201ENST00000400306 PTPRMP28827 1452 aa12.33□□□□□ -0.44
LINC02408-201ENST00000400306 CASKIN1Q8WXD9 1431 aa12.32□□□□□ -0.44
LINC02408-201ENST00000400306 NUP153P49790 1475 aaKnown RBP12.32□□□□□ -0.44
LINC02408-201ENST00000400306 SPATA31D1Q6ZQQ2 1576 aa12.32□□□□□ -0.44
LINC02408-201ENST00000400306 FYCO1Q9BQS8 1478 aa12.31□□□□□ -0.44
LINC02408-201ENST00000400306 KDM5BQ9UGL1 1544 aa12.31□□□□□ -0.44
LINC02408-201ENST00000400306 CDK13Q14004 1512 aaKnown RBP12.31□□□□□ -0.44
LINC02408-201ENST00000400306 BCORL1Q5H9F3 1711 aa12.29□□□□□ -0.44
LINC02408-201ENST00000400306 SPDYE2BA6NHP3 402 aa12.28□□□□□ -0.44
LINC02408-201ENST00000400306 SPDYE6P0CI01 402 aa12.28□□□□□ -0.44
LINC02408-201ENST00000400306 SPDYE2Q495Y8 402 aa12.28□□□□□ -0.44
LINC02408-201ENST00000400306 MADDQ8WXG6 1647 aa12.28□□□□□ -0.44
LINC02408-201ENST00000400306 MAGI3Q5TCQ9 1506 aa12.27□□□□□ -0.45
LINC02408-201ENST00000400306 ATP10BO94823 1461 aa12.26□□□□□ -0.45
LINC02408-201ENST00000400306 WDR7Q9Y4E6 1490 aa12.26□□□□□ -0.45
LINC02408-201ENST00000400306 RIMS1Q86UR5 1692 aaKnown RBP12.25□□□□□ -0.45
LINC02408-201ENST00000400306 CERKQ8TCT0 537 aa12.25□□□□□ -0.45
LINC02408-201ENST00000400306 TIAM1Q13009 1591 aa12.25□□□□□ -0.45
LINC02408-201ENST00000400306 PPARGC1BQ86YN6 1023 aaKnown RBP12.23□□□□□ -0.45
LINC02408-201ENST00000400306 CCDC18Q5T9S5 1454 aa12.23□□□□□ -0.45
LINC02408-201ENST00000400306 CD109Q6YHK3 1445 aa12.22□□□□□ -0.45
LINC02408-201ENST00000400306 REM2Q8IYK8 340 aaPredicted RBP12.21□□□□□ -0.45
LINC02408-201ENST00000400306 ARAP3Q8WWN8 1544 aa12.2□□□□□ -0.46
LINC02408-201ENST00000400306 KANK4Q5T7N3 995 aaPredicted RBP12.19□□□□□ -0.46
LINC02408-201ENST00000400306 CHRDL2Q6WN34 429 aa12.19□□□□□ -0.46
LINC02408-201ENST00000400306 ZNF692Q9BU19 519 aaPredicted RBP12.18□□□□□ -0.46
LINC02408-201ENST00000400306 MAP3K1Q13233 1512 aa12.17□□□□□ -0.46
LINC02408-201ENST00000400306 KIF14Q15058 1648 aa12.17□□□□□ -0.46
LINC02408-201ENST00000400306 LRRC9Q6ZRR7 1453 aa12.16□□□□□ -0.46
LINC02408-201ENST00000400306 MTUS2Q5JR59 1369 aa12.16□□□□□ -0.46
LINC02408-201ENST00000400306 EHBP1L1Q8N3D4 1523 aa12.16□□□□□ -0.46
LINC02408-201ENST00000400306 TROQ12816 1431 aaPredicted RBP12.15□□□□□ -0.46
LINC02408-201ENST00000400306 HSPA2P54652 639 aa12.15□□□□□ -0.46
LINC02408-201ENST00000400306 PLEKHD1A6NEE1 506 aa12.14□□□□□ -0.47
LINC02408-201ENST00000400306 KCNH8Q96L42 1107 aa12.14□□□□□ -0.47
LINC02408-201ENST00000400306 SUPT6HQ7KZ85 1726 aaKnown RBP12.13□□□□□ -0.47
LINC02408-201ENST00000400306 CDK11AQ9UQ88 783 aaPredicted RBP12.13□□□□□ -0.47
LINC02408-201ENST00000400306 SSUH2Q9Y2M2 353 aa12.12□□□□□ -0.47
LINC02408-201ENST00000400306 TTC37Q6PGP7 1564 aa12.11□□□□□ -0.47
LINC02408-201ENST00000400306 FER1L4A9Z1Z3 1794 aa12.11□□□□□ -0.47
LINC02408-201ENST00000400306 FRMPD1Q5SYB0 1578 aa12.11□□□□□ -0.47
LINC02408-201ENST00000400306 PREX1Q8TCU6 1659 aa12.11□□□□□ -0.47
LINC02408-201ENST00000400306 ARID4BQ4LE39 1312 aaPredicted RBP12.1□□□□□ -0.47
LINC02408-201ENST00000400306 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC02408-201ENST00000400306 NCOA2Q15596 1464 aa12.09□□□□□ -0.47
LINC02408-201ENST00000400306 STRCQ7RTU9 1775 aa12.09□□□□□ -0.47
LINC02408-201ENST00000400306 ABCA9Q8IUA7 1624 aa12.09□□□□□ -0.47
LINC02408-201ENST00000400306 ARHGEF40Q8TER5 1519 aa12.08□□□□□ -0.48
LINC02408-201ENST00000400306 PHLDB1Q86UU1 1377 aa12.08□□□□□ -0.48
LINC02408-201ENST00000400306 PITPNM1O00562 1244 aa12.07□□□□□ -0.48
LINC02408-201ENST00000400306 CDC42BPAQ5VT25 1732 aa12.07□□□□□ -0.48
LINC02408-201ENST00000400306 RICTORQ6R327 1708 aa12.06□□□□□ -0.48
LINC02408-201ENST00000400306 MYO5CQ9NQX4 1742 aa12.06□□□□□ -0.48
LINC02408-201ENST00000400306 CDC42BPBQ9Y5S2 1711 aa12.04□□□□□ -0.48
LINC02408-201ENST00000400306 SIGLEC1Q9BZZ2 1709 aa12.04□□□□□ -0.48
LINC02408-201ENST00000400306 ITSN2Q9NZM3 1697 aa12.03□□□□□ -0.48
LINC02408-201ENST00000400306 NEO1Q92859 1461 aa12.03□□□□□ -0.48
LINC02408-201ENST00000400306 PREX2Q70Z35 1606 aa12.03□□□□□ -0.48
LINC02408-201ENST00000400306 RAPGEF3O95398 923 aa12.03□□□□□ -0.48
LINC02408-201ENST00000400306 CCNB3Q8WWL7 1395 aa12.03□□□□□ -0.48
LINC02408-201ENST00000400306 FANCAO15360 1455 aa12.02□□□□□ -0.49
LINC02408-201ENST00000400306 SPDYE1Q8NFV5 336 aaPredicted RBP12.02□□□□□ -0.49
LINC02408-201ENST00000400306 GPATCH8Q9UKJ3 1502 aaKnown RBP12.02□□□□□ -0.49
LINC02408-201ENST00000400306 MYOM3Q5VTT5 1437 aa12.01□□□□□ -0.49
LINC02408-201ENST00000400306 POGZQ7Z3K3 1410 aa12.01□□□□□ -0.49
LINC02408-201ENST00000400306 SETD1BQ9UPS6 1966 aaKnown RBP12□□□□□ -0.49
LINC02408-201ENST00000400306 ARHGAP5Q13017 1502 aa12□□□□□ -0.49
LINC02408-201ENST00000400306 YEATS2Q9ULM3 1422 aa11.99□□□□□ -0.49
LINC02408-201ENST00000400306 ZNF777Q9ULD5 760 aaPredicted RBP11.98□□□□□ -0.49
LINC02408-201ENST00000400306 CLEC11AQ9Y240 323 aa11.98□□□□□ -0.49
LINC02408-201ENST00000400306 PLCH2O75038 1416 aa11.98□□□□□ -0.49
LINC02408-201ENST00000400306 IQSEC2Q5JU85 1478 aa11.98□□□□□ -0.49
LINC02408-201ENST00000400306 PTPN23Q9H3S7 1636 aa11.98□□□□□ -0.49
LINC02408-201ENST00000400306 FGD6Q6ZV73 1430 aa11.97□□□□□ -0.49
LINC02408-201ENST00000400306 SAMD9LQ8IVG5 1584 aa11.97□□□□□ -0.49
LINC02408-201ENST00000400306 CFAP74Q9C0B2 1584 aa11.97□□□□□ -0.49
LINC02408-201ENST00000400306 ZNF644Q9H582 1327 aaPredicted RBP11.96□□□□□ -0.49
LINC02408-201ENST00000400306 CFDP1Q9UEE9 299 aaPredicted RBP11.96□□□□□ -0.49
LINC02408-201ENST00000400306 LTBP4Q8N2S1 1624 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms