RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 BBXQ8WY36 941 aaPredicted RBP11.35□□□□□ -0.59
RETREG1-202ENST00000399793 KDM5BQ9UGL1 1544 aa11.35□□□□□ -0.59
RETREG1-202ENST00000399793 CCDC7Q96M83 1385 aa11.35□□□□□ -0.59
RETREG1-202ENST00000399793 ESPNB1AK53 854 aa11.35□□□□□ -0.59
RETREG1-202ENST00000399793 ERICH3Q5RHP9 1530 aa11.34□□□□□ -0.59
RETREG1-202ENST00000399793 FSD2A1L4K1 749 aa11.34□□□□□ -0.59
RETREG1-202ENST00000399793 ERBB4Q15303 1308 aa11.33□□□□□ -0.59
RETREG1-202ENST00000399793 AEBP2Q6ZN18 517 aaPredicted RBP11.32□□□□□ -0.6
RETREG1-202ENST00000399793 RCAN3Q9UKA8 241 aa11.32□□□□□ -0.6
RETREG1-202ENST00000399793 NCOA1Q15788 1441 aa11.32□□□□□ -0.6
RETREG1-202ENST00000399793 FAM161AQ3B820 660 aa11.32□□□□□ -0.6
RETREG1-202ENST00000399793 GTF2E1P29083 439 aaPredicted RBP11.31□□□□□ -0.6
RETREG1-202ENST00000399793 C8orf34Q49A92 452 aa11.31□□□□□ -0.6
RETREG1-202ENST00000399793 NAP1L2Q9ULW6 460 aaPredicted RBP11.31□□□□□ -0.6
RETREG1-202ENST00000399793 PHLDB1Q86UU1 1377 aa11.31□□□□□ -0.6
RETREG1-202ENST00000399793 CNGB1Q14028 1251 aaPredicted RBP11.31□□□□□ -0.6
RETREG1-202ENST00000399793 MAP3K1Q13233 1512 aa11.3□□□□□ -0.6
RETREG1-202ENST00000399793 ZHX1Q9UKY1 873 aaPredicted RBP11.3□□□□□ -0.6
RETREG1-202ENST00000399793 KIAA1211Q6ZU35 1233 aa11.3□□□□□ -0.6
RETREG1-202ENST00000399793 TAF7LQ5H9L4 462 aa11.29□□□□□ -0.6
RETREG1-202ENST00000399793 SMAP1Q8IYB5 467 aaPredicted RBP11.29□□□□□ -0.6
RETREG1-202ENST00000399793 GZF1Q9H116 711 aaPredicted RBP11.28□□□□□ -0.6
RETREG1-202ENST00000399793 CHMP4BQ9H444 224 aaKnown RBP11.28□□□□□ -0.6
RETREG1-202ENST00000399793 STAC3Q96MF2 364 aa11.28□□□□□ -0.6
RETREG1-202ENST00000399793 SLKQ9H2G2 1235 aaPredicted RBP11.28□□□□□ -0.6
RETREG1-202ENST00000399793 MYH16Q9H6N6 1097 aa11.27□□□□□ -0.6
RETREG1-202ENST00000399793 TIAM1Q13009 1591 aa11.26□□□□□ -0.61
RETREG1-202ENST00000399793 CANXP27824 592 aaKnown RBP11.26□□□□□ -0.61
RETREG1-202ENST00000399793 MRE11P49959 708 aa11.26□□□□□ -0.61
RETREG1-202ENST00000399793 RIPK4P57078 832 aa11.26□□□□□ -0.61
RETREG1-202ENST00000399793 PNISRQ8TF01 805 aaKnown RBP11.26□□□□□ -0.61
RETREG1-202ENST00000399793 CRBNQ96SW2 442 aa11.26□□□□□ -0.61
RETREG1-202ENST00000399793 PLIN1O60240 522 aa11.25□□□□□ -0.61
RETREG1-202ENST00000399793 MAP7D2Q96T17 732 aa11.25□□□□□ -0.61
RETREG1-202ENST00000399793 KTN1Q86UP2 1357 aaKnown RBP11.25□□□□□ -0.61
RETREG1-202ENST00000399793 KIF7Q2M1P5 1343 aa11.25□□□□□ -0.61
RETREG1-202ENST00000399793 ARHGAP35Q9NRY4 1499 aa11.24□□□□□ -0.61
RETREG1-202ENST00000399793 TRIM44Q96DX7 344 aaPredicted RBP11.24□□□□□ -0.61
RETREG1-202ENST00000399793 FAM13BQ9NYF5 915 aa11.24□□□□□ -0.61
RETREG1-202ENST00000399793 PRXQ9BXM0 1461 aa11.24□□□□□ -0.61
RETREG1-202ENST00000399793 UACAQ9BZF9 1416 aa11.24□□□□□ -0.61
RETREG1-202ENST00000399793 CCDC18Q5T9S5 1454 aa11.23□□□□□ -0.61
RETREG1-202ENST00000399793 KDM2BQ8NHM5 1336 aa11.23□□□□□ -0.61
RETREG1-202ENST00000399793 PRDM10Q9NQV6 1147 aa11.23□□□□□ -0.61
RETREG1-202ENST00000399793 ABCA5Q8WWZ7 1642 aa11.23□□□□□ -0.61
RETREG1-202ENST00000399793 LRRC9Q6ZRR7 1453 aa11.23□□□□□ -0.61
RETREG1-202ENST00000399793 GRPEL1Q9HAV7 217 aa11.22□□□□□ -0.61
RETREG1-202ENST00000399793 ANTXR1Q9H6X2 564 aa11.22□□□□□ -0.61
RETREG1-202ENST00000399793 DHX29Q7Z478 1369 aaKnown RBP11.21□□□□□ -0.61
RETREG1-202ENST00000399793 BECN1Q14457 450 aa11.21□□□□□ -0.61
RETREG1-202ENST00000399793 TMC1Q8TDI8 760 aa11.21□□□□□ -0.61
RETREG1-202ENST00000399793 CENPQQ7L2Z9 268 aaPredicted RBP11.2□□□□□ -0.62
RETREG1-202ENST00000399793 IPO4Q8TEX9 1081 aaKnown RBP11.2□□□□□ -0.62
RETREG1-202ENST00000399793 ARID3AQ99856 593 aa11.2□□□□□ -0.62
RETREG1-202ENST00000399793 USP19O94966 1318 aa11.2□□□□□ -0.62
RETREG1-202ENST00000399793 UTP14CQ5TAP6 766 aaKnown RBP11.2□□□□□ -0.62
RETREG1-202ENST00000399793 POLR1AO95602 1720 aaPredicted RBP11.2□□□□□ -0.62
RETREG1-202ENST00000399793 OFD1O75665 1012 aa11.19□□□□□ -0.62
RETREG1-202ENST00000399793 NCLP19338 710 aaKnown RBP11.19□□□□□ -0.62
RETREG1-202ENST00000399793 MCM4P33991 863 aa11.19□□□□□ -0.62
RETREG1-202ENST00000399793 DMTNQ08495 405 aa11.19□□□□□ -0.62
RETREG1-202ENST00000399793 PAXIP1Q6ZW49 1069 aaPredicted RBP11.19□□□□□ -0.62
RETREG1-202ENST00000399793 AQRO60306 1485 aaKnown RBP eCLIP11.18□□□□□ -0.62
RETREG1-202ENST00000399793 TRAK2O60296 914 aa11.18□□□□□ -0.62
RETREG1-202ENST00000399793 TERF1P54274 439 aa11.18□□□□□ -0.62
RETREG1-202ENST00000399793 MYOM3Q5VTT5 1437 aa11.18□□□□□ -0.62
RETREG1-202ENST00000399793 LRPPRCP42704 1394 aaKnown RBP11.17□□□□□ -0.62
RETREG1-202ENST00000399793 SMARCA4P51532 1647 aa11.17□□□□□ -0.62
RETREG1-202ENST00000399793 CDCA7LQ96GN5 454 aa11.16□□□□□ -0.62
RETREG1-202ENST00000399793 PPP4R3BQ5MIZ7 849 aa11.16□□□□□ -0.62
RETREG1-202ENST00000399793 C20orf194Q5TEA3 1177 aa11.16□□□□□ -0.62
RETREG1-202ENST00000399793 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.16□□□□□ -0.62
RETREG1-202ENST00000399793 TMEM51Q9NW97 253 aa11.16□□□□□ -0.62
RETREG1-202ENST00000399793 PDE3BQ13370 1112 aa11.15□□□□□ -0.62
RETREG1-202ENST00000399793 ZSCAN20P17040 1043 aaPredicted RBP11.15□□□□□ -0.63
RETREG1-202ENST00000399793 L3MBTL2Q969R5 705 aa11.15□□□□□ -0.63
RETREG1-202ENST00000399793 R3HCC1Q9Y3T6 440 aaKnown RBP11.14□□□□□ -0.63
RETREG1-202ENST00000399793 VIRMAQ69YN4 1812 aaKnown RBP11.14□□□□□ -0.63
RETREG1-202ENST00000399793 PTPN23Q9H3S7 1636 aa11.14□□□□□ -0.63
RETREG1-202ENST00000399793 MTERF4Q7Z6M4 381 aaKnown RBP11.14□□□□□ -0.63
RETREG1-202ENST00000399793 ISY1Q9ULR0 285 aaKnown RBP11.14□□□□□ -0.63
RETREG1-202ENST00000399793 SEC24BO95487 1268 aa11.13□□□□□ -0.63
RETREG1-202ENST00000399793 POLR3GLQ9BT43 218 aa11.13□□□□□ -0.63
RETREG1-202ENST00000399793 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.13□□□□□ -0.63
RETREG1-202ENST00000399793 HFM1A2PYH4 1435 aa11.13□□□□□ -0.63
RETREG1-202ENST00000399793 SPATA31E1Q6ZUB1 1445 aa11.13□□□□□ -0.63
RETREG1-202ENST00000399793 FOXD1Q16676 465 aa11.13□□□□□ -0.63
RETREG1-202ENST00000399793 ZSCAN30Q86W11 494 aa11.13□□□□□ -0.63
RETREG1-202ENST00000399793 UQCRHLA0A096LP55 91 aa11.12□□□□□ -0.63
RETREG1-202ENST00000399793 UQCRHP07919 91 aa11.12□□□□□ -0.63
RETREG1-202ENST00000399793 NBPF8Q3BBV2 869 aa11.12□□□□□ -0.63
RETREG1-202ENST00000399793 ANP32BQ92688 251 aaKnown RBP11.12□□□□□ -0.63
RETREG1-202ENST00000399793 ZNF830Q96NB3 372 aaPredicted RBP11.12□□□□□ -0.63
RETREG1-202ENST00000399793 VGLL3A8MV65 326 aa11.11□□□□□ -0.63
RETREG1-202ENST00000399793 TNNT2P45379 298 aaPredicted RBP11.11□□□□□ -0.63
RETREG1-202ENST00000399793 RSPH4AQ5TD94 716 aa11.11□□□□□ -0.63
RETREG1-202ENST00000399793 GAS2L3Q86XJ1 694 aa11.11□□□□□ -0.63
RETREG1-202ENST00000399793 PLCD3Q8N3E9 789 aa11.11□□□□□ -0.63
RETREG1-202ENST00000399793 SPRYD3Q8NCJ5 442 aa11.11□□□□□ -0.63
RETREG1-202ENST00000399793 TBC1D2Q9BYX2 928 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms