RNA–Protein interactions for RNA: ENST00000399408.6

ABCC1-201, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 5 BASIC

Gene ABCC1, Length 6,594 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-201ENST00000399408 LMOD2Q6P5Q4 547 aa19.76■□□□□ 0.75
ABCC1-201ENST00000399408 ATAD2BQ9ULI0 1458 aa19.76■□□□□ 0.75
ABCC1-201ENST00000399408 MLECQ14165 292 aa19.73■□□□□ 0.75
ABCC1-201ENST00000399408 ROCK2O75116 1388 aaKnown RBP19.73■□□□□ 0.75
ABCC1-201ENST00000399408 SAFB2Q14151 953 aaKnown RBP eCLIP19.71■□□□□ 0.75
ABCC1-201ENST00000399408 TRIM44Q96DX7 344 aaPredicted RBP19.7■□□□□ 0.74
ABCC1-201ENST00000399408 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
ABCC1-201ENST00000399408 RALBP1Q15311 655 aa19.69■□□□□ 0.74
ABCC1-201ENST00000399408 NOP58Q9Y2X3 529 aaKnown RBP19.68■□□□□ 0.74
ABCC1-201ENST00000399408 CCDC18Q5T9S5 1454 aa19.67■□□□□ 0.74
ABCC1-201ENST00000399408 GLIPR1L2Q4G1C9 344 aa19.67■□□□□ 0.74
ABCC1-201ENST00000399408 L3MBTL2Q969R5 705 aa19.66■□□□□ 0.74
ABCC1-201ENST00000399408 HDGFL2Q7Z4V5 671 aaPredicted RBP19.65■□□□□ 0.74
ABCC1-201ENST00000399408 STK26Q9P289 416 aa19.65■□□□□ 0.74
ABCC1-201ENST00000399408 RSPH4AQ5TD94 716 aa19.64■□□□□ 0.74
ABCC1-201ENST00000399408 HNRNPMP52272 730 aaKnown RBP eCLIP19.63■□□□□ 0.737e-6■■■□□ 16.1
ABCC1-201ENST00000399408 ERICH6BQ5W0A0 696 aa19.62■□□□□ 0.73
ABCC1-201ENST00000399408 OS9Q13438 667 aaPredicted RBP19.62■□□□□ 0.73
ABCC1-201ENST00000399408 SOX12O15370 315 aa19.61■□□□□ 0.73
ABCC1-201ENST00000399408 EIF3AQ14152 1382 aaKnown RBP19.61■□□□□ 0.73
ABCC1-201ENST00000399408 RUSC2Q8N2Y8 1516 aa19.6■□□□□ 0.73
ABCC1-201ENST00000399408 KIF3BO15066 747 aa19.6■□□□□ 0.73
ABCC1-201ENST00000399408 ZRSR1Q15695 479 aaKnown RBP19.59■□□□□ 0.73
ABCC1-201ENST00000399408 HSP90AB1P08238 724 aaKnown RBP19.58■□□□□ 0.72
ABCC1-201ENST00000399408 JPH4Q96JJ6 628 aa19.58■□□□□ 0.72
ABCC1-201ENST00000399408 RCAN3Q9UKA8 241 aa19.57■□□□□ 0.72
ABCC1-201ENST00000399408 TRHP20396 242 aaPredicted RBP19.56■□□□□ 0.72
ABCC1-201ENST00000399408 SPAG9O60271 1321 aaKnown RBP19.56■□□□□ 0.72
ABCC1-201ENST00000399408 FANCD2Q9BXW9 1451 aa19.56■□□□□ 0.72
ABCC1-201ENST00000399408 U2AF1L5P0DN76 240 aaPredicted RBP19.56■□□□□ 0.72
ABCC1-201ENST00000399408 U2AF1Q01081 240 aaKnown RBP eCLIP19.56■□□□□ 0.727e-8■■■■□ 23.5
ABCC1-201ENST00000399408 DHX57Q6P158 1386 aaKnown RBP19.55■□□□□ 0.72
ABCC1-201ENST00000399408 PTMAP06454 111 aaKnown RBP19.55■□□□□ 0.72
ABCC1-201ENST00000399408 RTF1Q92541 710 aaKnown RBP19.55■□□□□ 0.72
ABCC1-201ENST00000399408 IPO8O15397 1037 aaKnown RBP19.54■□□□□ 0.72
ABCC1-201ENST00000399408 CDK11BP21127 795 aaKnown RBP19.54■□□□□ 0.72
ABCC1-201ENST00000399408 CALD1Q05682 793 aaKnown RBP19.52■□□□□ 0.71
ABCC1-201ENST00000399408 HSCBQ8IWL3 235 aa19.52■□□□□ 0.71
ABCC1-201ENST00000399408 TPRNQ4KMQ1 711 aa19.51■□□□□ 0.71
ABCC1-201ENST00000399408 KCNJ4P48050 445 aa19.51■□□□□ 0.71
ABCC1-201ENST00000399408 RBM19Q9Y4C8 960 aaKnown RBP19.5■□□□□ 0.71
ABCC1-201ENST00000399408 NLRP13Q86W25 1043 aa19.5■□□□□ 0.71
ABCC1-201ENST00000399408 FGD1P98174 961 aa19.48■□□□□ 0.71
ABCC1-201ENST00000399408 CFAP44Q96MT7 982 aa19.48■□□□□ 0.71
ABCC1-201ENST00000399408 TERF2IPQ9NYB0 399 aa19.46■□□□□ 0.71
ABCC1-201ENST00000399408 WASHC2CQ9Y4E1 1318 aa19.46■□□□□ 0.71
ABCC1-201ENST00000399408 RWDD1Q9H446 243 aaPredicted RBP19.45■□□□□ 0.7
ABCC1-201ENST00000399408 MCCP23508 829 aa19.44■□□□□ 0.7
ABCC1-201ENST00000399408 GOLGA2Q08379 1002 aa19.44■□□□□ 0.7
ABCC1-201ENST00000399408 CCDC144AA2RUR9 1427 aa19.44■□□□□ 0.7
ABCC1-201ENST00000399408 NPHP1O15259 732 aa19.43■□□□□ 0.7
ABCC1-201ENST00000399408 PDE3BQ13370 1112 aa19.43■□□□□ 0.7
ABCC1-201ENST00000399408 TCERG1O14776 1098 aaKnown RBP19.43■□□□□ 0.7
ABCC1-201ENST00000399408 ITPRIPQ8IWB1 547 aa19.43■□□□□ 0.7
ABCC1-201ENST00000399408 PHLDB1Q86UU1 1377 aa19.42■□□□□ 0.7
ABCC1-201ENST00000399408 KIF15Q9NS87 1388 aa19.42■□□□□ 0.7
ABCC1-201ENST00000399408 PAK3O75914 559 aaPredicted RBP19.41■□□□□ 0.7
ABCC1-201ENST00000399408 IGF1RP08069 1367 aa19.41■□□□□ 0.7
ABCC1-201ENST00000399408 DNTTIP2Q5QJE6 756 aaKnown RBP19.4■□□□□ 0.7
ABCC1-201ENST00000399408 PTPRGP23470 1445 aa19.4■□□□□ 0.7
ABCC1-201ENST00000399408 ST20-MTHFSA0A0A6YYL1 179 aa19.4■□□□□ 0.7
ABCC1-201ENST00000399408 FGD5Q6ZNL6 1462 aa19.39■□□□□ 0.69
ABCC1-201ENST00000399408 MYBBP1AQ9BQG0 1328 aaKnown RBP19.38■□□□□ 0.69
ABCC1-201ENST00000399408 NUTM2DQ5VT03 806 aaPredicted RBP19.38■□□□□ 0.69
ABCC1-201ENST00000399408 NAP1L2Q9ULW6 460 aaPredicted RBP19.38■□□□□ 0.69
ABCC1-201ENST00000399408 PLCB2Q00722 1185 aa19.37■□□□□ 0.69
ABCC1-201ENST00000399408 APBB1O00213 710 aa19.37■□□□□ 0.69
ABCC1-201ENST00000399408 PMFBP1Q8TBY8 1022 aa19.37■□□□□ 0.69
ABCC1-201ENST00000399408 CCDC146Q8IYE0 955 aa19.36■□□□□ 0.69
ABCC1-201ENST00000399408 SMC4Q9NTJ3 1288 aa19.35■□□□□ 0.69
ABCC1-201ENST00000399408 TAOK2Q9UL54 1235 aa19.35■□□□□ 0.69
ABCC1-201ENST00000399408 SPRYD3Q8NCJ5 442 aa19.35■□□□□ 0.69
ABCC1-201ENST00000399408 GAPVD1Q14C86 1478 aa19.35■□□□□ 0.69
ABCC1-201ENST00000399408 CHMP4AQ9BY43 222 aa19.35■□□□□ 0.69
ABCC1-201ENST00000399408 GOLGA6L4A6NEF3 574 aa19.34■□□□□ 0.69
ABCC1-201ENST00000399408 TRAK1Q9UPV9 953 aa19.34■□□□□ 0.69
ABCC1-201ENST00000399408 UACAQ9BZF9 1416 aa19.34■□□□□ 0.69
ABCC1-201ENST00000399408 EID1Q9Y6B2 187 aa19.33■□□□□ 0.69
ABCC1-201ENST00000399408 CENPJQ9HC77 1338 aaPredicted RBP19.33■□□□□ 0.69
ABCC1-201ENST00000399408 PANK3Q9H999 370 aa19.33■□□□□ 0.68
ABCC1-201ENST00000399408 STK31Q9BXU1 1019 aa19.33■□□□□ 0.68
ABCC1-201ENST00000399408 PRKRIP1Q9H875 184 aaPredicted RBP19.31■□□□□ 0.68
ABCC1-201ENST00000399408 CSB-PGBD3P0DP91 1061 aa19.31■□□□□ 0.68
ABCC1-201ENST00000399408 USP47Q96K76 1375 aa19.3■□□□□ 0.68
ABCC1-201ENST00000399408 GOLGA6L6A8MZA4 724 aa19.3■□□□□ 0.68
ABCC1-201ENST00000399408 L1TD1Q5T7N2 865 aaKnown RBP19.3■□□□□ 0.68
ABCC1-201ENST00000399408 RAD54L2Q9Y4B4 1467 aa19.3■□□□□ 0.68
ABCC1-201ENST00000399408 LMOD3Q0VAK6 560 aa19.3■□□□□ 0.68
ABCC1-201ENST00000399408 KIAA1211Q6ZU35 1233 aa19.3■□□□□ 0.68
ABCC1-201ENST00000399408 MYOM3Q5VTT5 1437 aa19.29■□□□□ 0.68
ABCC1-201ENST00000399408 NGDNQ8NEJ9 315 aaKnown RBP19.28■□□□□ 0.68
ABCC1-201ENST00000399408 CLUAP1Q96AJ1 413 aa19.28■□□□□ 0.68
ABCC1-201ENST00000399408 NAP1L5Q96NT1 182 aaPredicted RBP19.28■□□□□ 0.68
ABCC1-201ENST00000399408 FGD6Q6ZV73 1430 aa19.27■□□□□ 0.68
ABCC1-201ENST00000399408 TSHZ2Q9NRE2 1034 aa19.27■□□□□ 0.68
ABCC1-201ENST00000399408 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.26■□□□□ 0.67
ABCC1-201ENST00000399408 RTN4Q9NQC3 1192 aaKnown RBP19.26■□□□□ 0.67
ABCC1-201ENST00000399408 VGFO15240 615 aaPredicted RBP19.26■□□□□ 0.67
ABCC1-201ENST00000399408 NCAPD3P42695 1498 aa19.25■□□□□ 0.67
ABCC1-201ENST00000399408 HMMRO75330 724 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms