RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 WDR7Q9Y4E6 1490 aa13.95□□□□□ -0.18
LINC00243-201ENST00000399196 MAPKBP1O60336 1514 aa13.94□□□□□ -0.18
LINC00243-201ENST00000399196 TCOF1Q13428 1488 aaKnown RBP13.94□□□□□ -0.18
LINC00243-201ENST00000399196 NPM1P06748 294 aaKnown RBP eCLIP13.93□□□□□ -0.18
LINC00243-201ENST00000399196 ABCC10Q5T3U5 1492 aa13.93□□□□□ -0.18
LINC00243-201ENST00000399196 CLSPNQ9HAW4 1339 aa13.92□□□□□ -0.18
LINC00243-201ENST00000399196 KCNA4P22459 653 aa13.92□□□□□ -0.18
LINC00243-201ENST00000399196 TTC37Q6PGP7 1564 aa13.92□□□□□ -0.18
LINC00243-201ENST00000399196 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.91□□□□□ -0.18
LINC00243-201ENST00000399196 KCNH8Q96L42 1107 aa13.91□□□□□ -0.18
LINC00243-201ENST00000399196 CFDP1Q9UEE9 299 aaPredicted RBP13.91□□□□□ -0.18
LINC00243-201ENST00000399196 ITSN2Q9NZM3 1697 aa13.89□□□□□ -0.19
LINC00243-201ENST00000399196 HFM1A2PYH4 1435 aa13.88□□□□□ -0.19
LINC00243-201ENST00000399196 GPATCH8Q9UKJ3 1502 aaKnown RBP13.88□□□□□ -0.19
LINC00243-201ENST00000399196 CDC42BPAQ5VT25 1732 aa13.88□□□□□ -0.19
LINC00243-201ENST00000399196 NAIPQ13075 1403 aa13.88□□□□□ -0.19
LINC00243-201ENST00000399196 ZNF777Q9ULD5 760 aaPredicted RBP13.87□□□□□ -0.19
LINC00243-201ENST00000399196 ZNF644Q9H582 1327 aaPredicted RBP13.87□□□□□ -0.19
LINC00243-201ENST00000399196 ABCA9Q8IUA7 1624 aa13.86□□□□□ -0.19
LINC00243-201ENST00000399196 CHIC2Q9UKJ5 165 aa13.85□□□□□ -0.19
LINC00243-201ENST00000399196 DIP2BQ9P265 1576 aa13.85□□□□□ -0.19
LINC00243-201ENST00000399196 CDC42BPBQ9Y5S2 1711 aa13.84□□□□□ -0.19
LINC00243-201ENST00000399196 PREX2Q70Z35 1606 aa13.84□□□□□ -0.19
LINC00243-201ENST00000399196 CAMSAP2Q08AD1 1489 aa13.84□□□□□ -0.19
LINC00243-201ENST00000399196 MYO5CQ9NQX4 1742 aa13.83□□□□□ -0.2
LINC00243-201ENST00000399196 KDM6BO15054 1643 aa13.83□□□□□ -0.2
LINC00243-201ENST00000399196 RRP7BPQ9NSQ0 103 aa13.83□□□□□ -0.2
LINC00243-201ENST00000399196 DAPK1P53355 1430 aa13.82□□□□□ -0.2
LINC00243-201ENST00000399196 KIF13AQ9H1H9 1805 aa13.81□□□□□ -0.2
LINC00243-201ENST00000399196 DNMT1P26358 1616 aaKnown RBP13.81□□□□□ -0.2
LINC00243-201ENST00000399196 GCC2Q8IWJ2 1684 aa13.81□□□□□ -0.2
LINC00243-201ENST00000399196 ABCC5O15440 1437 aa13.8□□□□□ -0.2
LINC00243-201ENST00000399196 GLI2P10070 1586 aa13.8□□□□□ -0.2
LINC00243-201ENST00000399196 SIN3AQ96ST3 1273 aa13.8□□□□□ -0.2
LINC00243-201ENST00000399196 ZNF316A6NFI3 1004 aaPredicted RBP13.79□□□□□ -0.2
LINC00243-201ENST00000399196 MAP3K4Q9Y6R4 1608 aa13.79□□□□□ -0.2
LINC00243-201ENST00000399196 PLCH2O75038 1416 aa13.79□□□□□ -0.2
LINC00243-201ENST00000399196 SAMD9LQ8IVG5 1584 aa13.78□□□□□ -0.2
LINC00243-201ENST00000399196 ARHGAP5Q13017 1502 aa13.78□□□□□ -0.2
LINC00243-201ENST00000399196 AKNAQ7Z591 1439 aa13.77□□□□□ -0.2
LINC00243-201ENST00000399196 FAM69CQ0P6D2 419 aa13.77□□□□□ -0.21
LINC00243-201ENST00000399196 CD109Q6YHK3 1445 aa13.77□□□□□ -0.21
LINC00243-201ENST00000399196 DENND4BO75064 1496 aaPredicted RBP13.76□□□□□ -0.21
LINC00243-201ENST00000399196 PPRC1Q5VV67 1664 aaKnown RBP13.76□□□□□ -0.21
LINC00243-201ENST00000399196 ROCK1Q13464 1354 aa13.75□□□□□ -0.21
LINC00243-201ENST00000399196 ARAP3Q8WWN8 1544 aa13.75□□□□□ -0.21
LINC00243-201ENST00000399196 DIEXFQ68CQ4 756 aaKnown RBP13.74□□□□□ -0.21
LINC00243-201ENST00000399196 TSPOAP1O95153 1857 aa13.73□□□□□ -0.21
LINC00243-201ENST00000399196 FANCAO15360 1455 aa13.73□□□□□ -0.21
LINC00243-201ENST00000399196 TSPY4P0CV99 314 aa13.73□□□□□ -0.21
LINC00243-201ENST00000399196 TSPY10P0CW01 314 aa13.73□□□□□ -0.21
LINC00243-201ENST00000399196 HNRNPMP52272 730 aaKnown RBP eCLIP13.73□□□□□ -0.21
LINC00243-201ENST00000399196 NEUROD1Q13562 356 aa13.73□□□□□ -0.21
LINC00243-201ENST00000399196 ARHGEF12Q9NZN5 1544 aa13.73□□□□□ -0.21
LINC00243-201ENST00000399196 ABCC1P33527 1531 aa13.72□□□□□ -0.21
LINC00243-201ENST00000399196 SYCP2Q9BX26 1530 aa13.72□□□□□ -0.21
LINC00243-201ENST00000399196 CROCC2H7BZ55 1655 aa13.71□□□□□ -0.21
LINC00243-201ENST00000399196 ANKRD30AQ9BXX3 1397 aa13.71□□□□□ -0.21
LINC00243-201ENST00000399196 EFCAB2Q5VUJ9 269 aa13.71□□□□□ -0.21
LINC00243-201ENST00000399196 TRIM52Q96A61 297 aa13.71□□□□□ -0.21
LINC00243-201ENST00000399196 MBD5Q9P267 1494 aa13.7□□□□□ -0.22
LINC00243-201ENST00000399196 RSPH4AQ5TD94 716 aa13.7□□□□□ -0.22
LINC00243-201ENST00000399196 ADGBQ8N7X0 1667 aa13.69□□□□□ -0.22
LINC00243-201ENST00000399196 NCOA1Q15788 1441 aa13.69□□□□□ -0.22
LINC00243-201ENST00000399196 C9orf84Q5VXU9 1444 aa13.69□□□□□ -0.22
LINC00243-201ENST00000399196 ARHGEF5Q12774 1597 aa13.69□□□□□ -0.22
LINC00243-201ENST00000399196 ACIN1Q9UKV3 1341 aaKnown RBP13.69□□□□□ -0.22
LINC00243-201ENST00000399196 PLEKHH2Q8IVE3 1493 aa13.69□□□□□ -0.22
LINC00243-201ENST00000399196 SHANK2Q9UPX8 1470 aa13.69□□□□□ -0.22
LINC00243-201ENST00000399196 CCDC141Q6ZP82 1450 aa13.68□□□□□ -0.22
LINC00243-201ENST00000399196 ADGRL2O95490 1459 aa13.68□□□□□ -0.22
LINC00243-201ENST00000399196 TRAPPC8Q9Y2L5 1435 aa13.67□□□□□ -0.22
LINC00243-201ENST00000399196 ADGRL1O94910 1474 aa13.67□□□□□ -0.22
LINC00243-201ENST00000399196 CFAP74Q9C0B2 1584 aa13.66□□□□□ -0.22
LINC00243-201ENST00000399196 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
LINC00243-201ENST00000399196 KIAA1107Q9UPP5 1409 aa13.66□□□□□ -0.22
LINC00243-201ENST00000399196 NEO1Q92859 1461 aa13.66□□□□□ -0.22
LINC00243-201ENST00000399196 PRKCSHP14314 528 aaPredicted RBP13.65□□□□□ -0.22
LINC00243-201ENST00000399196 TRHP20396 242 aaPredicted RBP13.65□□□□□ -0.22
LINC00243-201ENST00000399196 SCAPERQ9BY12 1400 aa13.65□□□□□ -0.23
LINC00243-201ENST00000399196 MPHOSPH9Q99550 1183 aa13.63□□□□□ -0.23
LINC00243-201ENST00000399196 FOXD1Q16676 465 aa13.63□□□□□ -0.23
LINC00243-201ENST00000399196 ANKRD50Q9ULJ7 1429 aa13.62□□□□□ -0.23
LINC00243-201ENST00000399196 KIF15Q9NS87 1388 aa13.62□□□□□ -0.23
LINC00243-201ENST00000399196 TEX14Q8IWB6 1497 aa13.62□□□□□ -0.23
LINC00243-201ENST00000399196 PPP1R15AO75807 674 aaPredicted RBP13.62□□□□□ -0.23
LINC00243-201ENST00000399196 AFAP1Q8N556 730 aa13.62□□□□□ -0.23
LINC00243-201ENST00000399196 FRMPD1Q5SYB0 1578 aa13.61□□□□□ -0.23
LINC00243-201ENST00000399196 COL17A1Q9UMD9 1497 aaPredicted RBP13.61□□□□□ -0.23
LINC00243-201ENST00000399196 TIMELESSQ9UNS1 1208 aa13.6□□□□□ -0.23
LINC00243-201ENST00000399196 POGZQ7Z3K3 1410 aa13.6□□□□□ -0.23
LINC00243-201ENST00000399196 RICTORQ6R327 1708 aa13.6□□□□□ -0.23
LINC00243-201ENST00000399196 PZPP20742 1482 aa13.6□□□□□ -0.23
LINC00243-201ENST00000399196 RAPGEF3O95398 923 aa13.59□□□□□ -0.23
LINC00243-201ENST00000399196 SLC4A1APQ9BWU0 796 aaKnown RBP13.59□□□□□ -0.23
LINC00243-201ENST00000399196 MAST1Q9Y2H9 1570 aa13.58□□□□□ -0.23
LINC00243-201ENST00000399196 KDM5CP41229 1560 aa13.58□□□□□ -0.24
LINC00243-201ENST00000399196 ZFYVE16Q7Z3T8 1539 aa13.58□□□□□ -0.24
LINC00243-201ENST00000399196 INO80Q9ULG1 1556 aaPredicted RBP13.57□□□□□ -0.24
LINC00243-201ENST00000399196 ZNF518AQ6AHZ1 1483 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms