RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 C14orf37Q86TY3 774 aa12.12□□□□□ -0.47
CDH23-203ENST00000398788 TNNT2P45379 298 aaPredicted RBP12.12□□□□□ -0.47
CDH23-203ENST00000398788 PPP1R15AO75807 674 aaPredicted RBP12.11□□□□□ -0.47
CDH23-203ENST00000398788 L1TD1Q5T7N2 865 aaKnown RBP12.1□□□□□ -0.47
CDH23-203ENST00000398788 GZF1Q9H116 711 aaPredicted RBP12.1□□□□□ -0.47
CDH23-203ENST00000398788 ANP32BQ92688 251 aaKnown RBP12.1□□□□□ -0.47
CDH23-203ENST00000398788 CARD11Q9BXL7 1154 aa12.1□□□□□ -0.47
CDH23-203ENST00000398788 KIF21AQ7Z4S6 1674 aa12.08□□□□□ -0.48
CDH23-203ENST00000398788 RBM10P98175 930 aaKnown RBP12.08□□□□□ -0.48
CDH23-203ENST00000398788 PDE4AP27815 886 aa12.08□□□□□ -0.48
CDH23-203ENST00000398788 FHAD1B1AJZ9 1412 aa12.07□□□□□ -0.48
CDH23-203ENST00000398788 SYNJ1O43426 1573 aa12.07□□□□□ -0.48
CDH23-203ENST00000398788 RRP9O43818 475 aaKnown RBP12.07□□□□□ -0.48
CDH23-203ENST00000398788 CDK11BP21127 795 aaKnown RBP12.06□□□□□ -0.48
CDH23-203ENST00000398788 CARMIL2Q6F5E8 1435 aa12.06□□□□□ -0.48
CDH23-203ENST00000398788 CCNB3Q8WWL7 1395 aa12.06□□□□□ -0.48
CDH23-203ENST00000398788 CUX1P39880 1505 aa12.05□□□□□ -0.48
CDH23-203ENST00000398788 TCERG1O14776 1098 aaKnown RBP12.05□□□□□ -0.48
CDH23-203ENST00000398788 DHX57Q6P158 1386 aaKnown RBP12.04□□□□□ -0.48
CDH23-203ENST00000398788 FOXD1Q16676 465 aa12.04□□□□□ -0.48
CDH23-203ENST00000398788 SLKQ9H2G2 1235 aaPredicted RBP12.04□□□□□ -0.48
CDH23-203ENST00000398788 C11orf95C9JLR9 678 aaPredicted RBP12.03□□□□□ -0.48
CDH23-203ENST00000398788 KANK4Q5T7N3 995 aaPredicted RBP12.03□□□□□ -0.48
CDH23-203ENST00000398788 KNSTRNQ9Y448 316 aa12.03□□□□□ -0.48
CDH23-203ENST00000398788 JPH4Q96JJ6 628 aa12.02□□□□□ -0.48
CDH23-203ENST00000398788 RGS3P49796 1198 aa12.02□□□□□ -0.49
CDH23-203ENST00000398788 CC2D1BQ5T0F9 858 aaKnown RBP12.02□□□□□ -0.49
CDH23-203ENST00000398788 FRAT2O75474 233 aaPredicted RBP12.02□□□□□ -0.49
CDH23-203ENST00000398788 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
CDH23-203ENST00000398788 TOP2BQ02880 1626 aa12□□□□□ -0.49
CDH23-203ENST00000398788 GOLGA6L3A6NEY3 463 aa12□□□□□ -0.49
CDH23-203ENST00000398788 MLECQ14165 292 aa12□□□□□ -0.49
CDH23-203ENST00000398788 TOPBP1Q92547 1522 aa12□□□□□ -0.49
CDH23-203ENST00000398788 DCAF11Q8TEB1 546 aa12□□□□□ -0.49
CDH23-203ENST00000398788 WASHC2AQ641Q2 1341 aa11.99□□□□□ -0.49
CDH23-203ENST00000398788 BECN1Q14457 450 aa11.99□□□□□ -0.49
CDH23-203ENST00000398788 MRC2Q9UBG0 1479 aa11.99□□□□□ -0.49
CDH23-203ENST00000398788 SPRYD3Q8NCJ5 442 aa11.99□□□□□ -0.49
CDH23-203ENST00000398788 NCLP19338 710 aaKnown RBP11.98□□□□□ -0.49
CDH23-203ENST00000398788 FAM13BQ9NYF5 915 aa11.98□□□□□ -0.49
CDH23-203ENST00000398788 LMOD2Q6P5Q4 547 aa11.98□□□□□ -0.49
CDH23-203ENST00000398788 DNMBPQ6XZF7 1577 aa11.98□□□□□ -0.49
CDH23-203ENST00000398788 SAFB2Q14151 953 aaKnown RBP eCLIP11.98□□□□□ -0.49
CDH23-203ENST00000398788 BIVM-ERCC5R4GMW8 1640 aa11.97□□□□□ -0.49
CDH23-203ENST00000398788 TPRNQ4KMQ1 711 aa11.97□□□□□ -0.49
CDH23-203ENST00000398788 FGD5Q6ZNL6 1462 aa11.97□□□□□ -0.49
CDH23-203ENST00000398788 EFCAB2Q5VUJ9 269 aa11.97□□□□□ -0.49
CDH23-203ENST00000398788 SOX12O15370 315 aa11.96□□□□□ -0.49
CDH23-203ENST00000398788 GGT6Q6P531 493 aa11.95□□□□□ -0.5
CDH23-203ENST00000398788 MYH16Q9H6N6 1097 aa11.95□□□□□ -0.5
CDH23-203ENST00000398788 WASHC2CQ9Y4E1 1318 aa11.95□□□□□ -0.5
CDH23-203ENST00000398788 OSCARQ8IYS5 282 aa11.94□□□□□ -0.5
CDH23-203ENST00000398788 U2SURPO15042 1029 aaKnown RBP11.93□□□□□ -0.5
CDH23-203ENST00000398788 POLA1P09884 1462 aaPredicted RBP11.93□□□□□ -0.5
CDH23-203ENST00000398788 BCL11BQ9C0K0 894 aaPredicted RBP11.93□□□□□ -0.5
CDH23-203ENST00000398788 POGKQ9P215 609 aa11.93□□□□□ -0.5
CDH23-203ENST00000398788 RAD54L2Q9Y4B4 1467 aa11.93□□□□□ -0.5
CDH23-203ENST00000398788 PDIA4P13667 645 aaKnown RBP11.92□□□□□ -0.5
CDH23-203ENST00000398788 MSNP26038 577 aaKnown RBP11.92□□□□□ -0.5
CDH23-203ENST00000398788 CYB5RLQ6IPT4 315 aa11.92□□□□□ -0.5
CDH23-203ENST00000398788 CFAP53Q96M91 514 aa11.92□□□□□ -0.5
CDH23-203ENST00000398788 THOC2Q8NI27 1593 aaKnown RBP11.92□□□□□ -0.5
CDH23-203ENST00000398788 FMN1Q68DA7 1419 aa11.91□□□□□ -0.5
CDH23-203ENST00000398788 EXOC6Q8TAG9 804 aa11.91□□□□□ -0.5
CDH23-203ENST00000398788 RUSC2Q8N2Y8 1516 aa11.91□□□□□ -0.5
CDH23-203ENST00000398788 WDR62O43379 1518 aa11.91□□□□□ -0.5
CDH23-203ENST00000398788 DNTTIP2Q5QJE6 756 aaKnown RBP11.91□□□□□ -0.5
CDH23-203ENST00000398788 BBXQ8WY36 941 aaPredicted RBP11.91□□□□□ -0.5
CDH23-203ENST00000398788 NUDCQ9Y266 331 aa11.91□□□□□ -0.5
CDH23-203ENST00000398788 RAPGEF2Q9Y4G8 1499 aa11.91□□□□□ -0.5
CDH23-203ENST00000398788 VPS8Q8N3P4 1428 aa11.9□□□□□ -0.5
CDH23-203ENST00000398788 FTSJ3Q8IY81 847 aaKnown RBP11.9□□□□□ -0.5
CDH23-203ENST00000398788 ZHX1Q9UKY1 873 aaPredicted RBP11.89□□□□□ -0.51
CDH23-203ENST00000398788 HSPA5P11021 654 aaKnown RBP11.88□□□□□ -0.51
CDH23-203ENST00000398788 CDCA8Q53HL2 280 aa11.88□□□□□ -0.51
CDH23-203ENST00000398788 RRAGDQ9NQL2 400 aaPredicted RBP11.88□□□□□ -0.51
CDH23-203ENST00000398788 FGD1P98174 961 aa11.88□□□□□ -0.51
CDH23-203ENST00000398788 PKD2Q13563 968 aa11.88□□□□□ -0.51
CDH23-203ENST00000398788 KANK1Q14678 1352 aa11.88□□□□□ -0.51
CDH23-203ENST00000398788 HAP1P54257 671 aaPredicted RBP11.88□□□□□ -0.51
CDH23-203ENST00000398788 TAOK2Q9UL54 1235 aa11.88□□□□□ -0.51
CDH23-203ENST00000398788 PRDM10Q9NQV6 1147 aa11.87□□□□□ -0.51
CDH23-203ENST00000398788 ZBED9Q6R2W3 1325 aa11.86□□□□□ -0.51
CDH23-203ENST00000398788 MAPK8IP3Q9UPT6 1336 aa11.86□□□□□ -0.51
CDH23-203ENST00000398788 MAPK8IP2Q13387 824 aaPredicted RBP11.86□□□□□ -0.51
CDH23-203ENST00000398788 STK26Q9P289 416 aa11.86□□□□□ -0.51
CDH23-203ENST00000398788 HDGFP51858 240 aaKnown RBP11.86□□□□□ -0.51
CDH23-203ENST00000398788 AAMPQ13685 434 aa11.86□□□□□ -0.51
CDH23-203ENST00000398788 BACH2Q9BYV9 841 aa11.86□□□□□ -0.51
CDH23-203ENST00000398788 FHOD3Q2V2M9 1422 aa11.84□□□□□ -0.51
CDH23-203ENST00000398788 PTPRGP23470 1445 aa11.83□□□□□ -0.52
CDH23-203ENST00000398788 AKNAQ7Z591 1439 aa11.83□□□□□ -0.52
CDH23-203ENST00000398788 PDCL3Q9H2J4 239 aa11.83□□□□□ -0.52
CDH23-203ENST00000398788 SRPK2P78362 688 aaKnown RBP11.83□□□□□ -0.52
CDH23-203ENST00000398788 RCAN3Q9UKA8 241 aa11.83□□□□□ -0.52
CDH23-203ENST00000398788 MS4A1P11836 297 aa11.82□□□□□ -0.52
CDH23-203ENST00000398788 HNRNPMP52272 730 aaKnown RBP eCLIP11.82□□□□□ -0.52
CDH23-203ENST00000398788 TPM2P07951 284 aa11.82□□□□□ -0.52
CDH23-203ENST00000398788 CCDC184Q52MB2 194 aa11.82□□□□□ -0.52
CDH23-203ENST00000398788 SKAP1Q86WV1 359 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms