RNA–Protein interactions for RNA: ENST00000398637.9

SLC38A1-201, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 8,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-201ENST00000398637 FBXW7Q969H0 707 aa14.65□□□□□ -0.06
SLC38A1-201ENST00000398637 FOXD1Q16676 465 aa14.64□□□□□ -0.07
SLC38A1-201ENST00000398637 NRDCO43847 1150 aa14.64□□□□□ -0.07
SLC38A1-201ENST00000398637 SF3B2Q13435 895 aaKnown RBP14.63□□□□□ -0.07
SLC38A1-201ENST00000398637 MARCH6O60337 910 aa14.62□□□□□ -0.07
SLC38A1-201ENST00000398637 IRX6P78412 446 aaPredicted RBP14.62□□□□□ -0.07
SLC38A1-201ENST00000398637 ERICH6BQ5W0A0 696 aa14.6□□□□□ -0.07
SLC38A1-201ENST00000398637 RASSF8Q8NHQ8 419 aa14.6□□□□□ -0.07
SLC38A1-201ENST00000398637 SYTL4Q96C24 671 aaPredicted RBP14.59□□□□□ -0.07
SLC38A1-201ENST00000398637 L1TD1Q5T7N2 865 aaKnown RBP14.59□□□□□ -0.07
SLC38A1-201ENST00000398637 CARD11Q9BXL7 1154 aa14.59□□□□□ -0.07
SLC38A1-201ENST00000398637 APBB1O00213 710 aa14.58□□□□□ -0.08
SLC38A1-201ENST00000398637 CHMP4BQ9H444 224 aaKnown RBP14.58□□□□□ -0.08
SLC38A1-201ENST00000398637 CC2D1BQ5T0F9 858 aaKnown RBP14.57□□□□□ -0.08
SLC38A1-201ENST00000398637 CEP89Q96ST8 783 aa14.56□□□□□ -0.08
SLC38A1-201ENST00000398637 HSP90AB1P08238 724 aaKnown RBP14.55□□□□□ -0.08
SLC38A1-201ENST00000398637 NGDNQ8NEJ9 315 aaKnown RBP14.55□□□□□ -0.08
SLC38A1-201ENST00000398637 LTV1Q96GA3 475 aaPredicted RBP14.55□□□□□ -0.08
SLC38A1-201ENST00000398637 TOMM22Q9NS69 142 aa14.55□□□□□ -0.08
SLC38A1-201ENST00000398637 SAMD1Q6SPF0 538 aaPredicted RBP14.55□□□□□ -0.08
SLC38A1-201ENST00000398637 NUTM2FA1L443 756 aa14.55□□□□□ -0.08
SLC38A1-201ENST00000398637 CREBRFQ8IUR6 639 aa14.55□□□□□ -0.08
SLC38A1-201ENST00000398637 DRC7Q8IY82 874 aa14.55□□□□□ -0.08
SLC38A1-201ENST00000398637 HDGFL2Q7Z4V5 671 aaPredicted RBP14.54□□□□□ -0.08
SLC38A1-201ENST00000398637 A0A0U1RQG5 324 aaPredicted RBP14.53□□□□□ -0.08
SLC38A1-201ENST00000398637 MCCP23508 829 aa14.53□□□□□ -0.08
SLC38A1-201ENST00000398637 KIAA1211Q6ZU35 1233 aa14.53□□□□□ -0.08
SLC38A1-201ENST00000398637 CCAR1Q8IX12 1150 aaKnown RBP14.52□□□□□ -0.08
SLC38A1-201ENST00000398637 RSF1Q96T23 1441 aaPredicted RBP14.51□□□□□ -0.09
SLC38A1-201ENST00000398637 EIF4G1Q04637 1599 aaKnown RBP14.49□□□□□ -0.09
SLC38A1-201ENST00000398637 NOL10Q9BSC4 688 aaKnown RBP14.49□□□□□ -0.09
SLC38A1-201ENST00000398637 HSP90B1P14625 803 aaKnown RBP14.49□□□□□ -0.09
SLC38A1-201ENST00000398637 DDRGK1Q96HY6 314 aa14.48□□□□□ -0.09
SLC38A1-201ENST00000398637 MORC1Q86VD1 984 aa14.47□□□□□ -0.09
SLC38A1-201ENST00000398637 AMPHP49418 695 aa14.46□□□□□ -0.1
SLC38A1-201ENST00000398637 SPAG9O60271 1321 aaKnown RBP14.45□□□□□ -0.1
SLC38A1-201ENST00000398637 RGS3P49796 1198 aa14.45□□□□□ -0.1
SLC38A1-201ENST00000398637 MS4A1P11836 297 aa14.45□□□□□ -0.1
SLC38A1-201ENST00000398637 AMOTL1Q8IY63 956 aa14.43□□□□□ -0.1
SLC38A1-201ENST00000398637 GPATCH3Q96I76 525 aa14.43□□□□□ -0.1
SLC38A1-201ENST00000398637 NUTM2DQ5VT03 806 aaPredicted RBP14.43□□□□□ -0.1
SLC38A1-201ENST00000398637 VPS37DQ86XT2 251 aa14.43□□□□□ -0.1
SLC38A1-201ENST00000398637 CYB5RLQ6IPT4 315 aa14.41□□□□□ -0.1
SLC38A1-201ENST00000398637 PAF1Q8N7H5 531 aa14.4□□□□□ -0.1
SLC38A1-201ENST00000398637 DCAF11Q8TEB1 546 aa14.4□□□□□ -0.1
SLC38A1-201ENST00000398637 NGEFQ8N5V2 710 aa14.4□□□□□ -0.1
SLC38A1-201ENST00000398637 STK31Q9BXU1 1019 aa14.39□□□□□ -0.11
SLC38A1-201ENST00000398637 TMF1P82094 1093 aa14.39□□□□□ -0.11
SLC38A1-201ENST00000398637 CCDC43Q96MW1 224 aaKnown RBP14.38□□□□□ -0.11
SLC38A1-201ENST00000398637 ZCCHC6Q5VYS8 1495 aaKnown RBP14.38□□□□□ -0.11
SLC38A1-201ENST00000398637 CCDC34Q96HJ3 373 aa14.38□□□□□ -0.11
SLC38A1-201ENST00000398637 PES1O00541 588 aaKnown RBP14.38□□□□□ -0.11
SLC38A1-201ENST00000398637 DHX16O60231 1041 aaKnown RBP14.38□□□□□ -0.11
SLC38A1-201ENST00000398637 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.37□□□□□ -0.113e-7■■■■■ 72.7
SLC38A1-201ENST00000398637 RBM33Q96EV2 1170 aaKnown RBP14.37□□□□□ -0.11
SLC38A1-201ENST00000398637 CFAP44Q96MT7 982 aa14.37□□□□□ -0.11
SLC38A1-201ENST00000398637 PAXIP1Q6ZW49 1069 aaPredicted RBP14.36□□□□□ -0.11
SLC38A1-201ENST00000398637 CLIP1P30622 1438 aa14.36□□□□□ -0.11
SLC38A1-201ENST00000398637 C1orf141Q5JVX7 400 aa14.36□□□□□ -0.11
SLC38A1-201ENST00000398637 SLC4A10Q6U841 1118 aa14.35□□□□□ -0.11
SLC38A1-201ENST00000398637 CHMP4AQ9BY43 222 aa14.35□□□□□ -0.11
SLC38A1-201ENST00000398637 TRIM6-TRIM34B2RNG4 842 aa14.34□□□□□ -0.11
SLC38A1-201ENST00000398637 CCNB3Q8WWL7 1395 aa14.34□□□□□ -0.11
SLC38A1-201ENST00000398637 PIP4K2BP78356 416 aa14.34□□□□□ -0.11
SLC38A1-201ENST00000398637 SPRYD3Q8NCJ5 442 aa14.34□□□□□ -0.11
SLC38A1-201ENST00000398637 VSIG10Q8N0Z9 540 aa14.33□□□□□ -0.11
SLC38A1-201ENST00000398637 R3HCC1Q9Y3T6 440 aaKnown RBP14.33□□□□□ -0.12
SLC38A1-201ENST00000398637 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.33□□□□□ -0.121e-6■■■■□ 22.6
SLC38A1-201ENST00000398637 ATF3P18847 181 aa14.32□□□□□ -0.12
SLC38A1-201ENST00000398637 AKAP17AQ02040 695 aaKnown RBP14.31□□□□□ -0.12
SLC38A1-201ENST00000398637 WDR70Q9NW82 654 aa14.31□□□□□ -0.12
SLC38A1-201ENST00000398637 PPM1FP49593 454 aaPredicted RBP14.31□□□□□ -0.12
SLC38A1-201ENST00000398637 HSCBQ8IWL3 235 aa14.31□□□□□ -0.12
SLC38A1-201ENST00000398637 CALD1Q05682 793 aaKnown RBP14.31□□□□□ -0.12
SLC38A1-201ENST00000398637 WWC2Q6AWC2 1192 aa14.31□□□□□ -0.12
SLC38A1-201ENST00000398637 TTC5Q8N0Z6 440 aa14.31□□□□□ -0.12
SLC38A1-201ENST00000398637 TPM4P67936 248 aa14.3□□□□□ -0.12
SLC38A1-201ENST00000398637 TMEM132AQ24JP5 1023 aa14.3□□□□□ -0.12
SLC38A1-201ENST00000398637 WASHC2CQ9Y4E1 1318 aa14.3□□□□□ -0.12
SLC38A1-201ENST00000398637 NUTM2BA6NNL0 878 aaPredicted RBP14.3□□□□□ -0.12
SLC38A1-201ENST00000398637 NUTM2EB1AL46 878 aaPredicted RBP14.3□□□□□ -0.12
SLC38A1-201ENST00000398637 SLC4A3P48751 1232 aa14.3□□□□□ -0.12
SLC38A1-201ENST00000398637 PSME1Q06323 249 aa14.3□□□□□ -0.12
SLC38A1-201ENST00000398637 NUTM2AQ8IVF1 878 aaPredicted RBP14.3□□□□□ -0.12
SLC38A1-201ENST00000398637 U2AF1L5P0DN76 240 aaPredicted RBP14.29□□□□□ -0.12
SLC38A1-201ENST00000398637 U2AF1Q01081 240 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■□□□□ 9.2
SLC38A1-201ENST00000398637 HDAC5Q9UQL6 1122 aa14.29□□□□□ -0.12
SLC38A1-201ENST00000398637 ACIN1Q9UKV3 1341 aaKnown RBP14.29□□□□□ -0.12
SLC38A1-201ENST00000398637 HTATSF1O43719 755 aaKnown RBP14.29□□□□□ -0.12
SLC38A1-201ENST00000398637 TPD52L1Q16890 204 aaPredicted RBP14.27□□□□□ -0.12
SLC38A1-201ENST00000398637 WASHC2AQ641Q2 1341 aa14.27□□□□□ -0.12
SLC38A1-201ENST00000398637 IPO8O15397 1037 aaKnown RBP14.26□□□□□ -0.13
SLC38A1-201ENST00000398637 IKQ13123 557 aaPredicted RBP14.26□□□□□ -0.13
SLC38A1-201ENST00000398637 USP35Q9P2H5 1018 aa14.25□□□□□ -0.13
SLC38A1-201ENST00000398637 ITPRIPQ8IWB1 547 aa14.25□□□□□ -0.13
SLC38A1-201ENST00000398637 KIF3BO15066 747 aa14.24□□□□□ -0.13
SLC38A1-201ENST00000398637 RB1CC1Q8TDY2 1594 aa14.24□□□□□ -0.13
SLC38A1-201ENST00000398637 IBSPP21815 317 aaPredicted RBP14.24□□□□□ -0.13
SLC38A1-201ENST00000398637 B4GALNT3Q6L9W6 998 aa14.24□□□□□ -0.13
SLC38A1-201ENST00000398637 SPDYE4A6NLX3 237 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms