RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 ZFYVE16Q7Z3T8 1539 aa19.95■□□□□ 0.78
TFF3-202ENST00000398431 PCF11O94913 1555 aaKnown RBP19.94■□□□□ 0.78
TFF3-202ENST00000398431 EFCAB2Q5VUJ9 269 aa19.93■□□□□ 0.78
TFF3-202ENST00000398431 POGZQ7Z3K3 1410 aa19.92■□□□□ 0.78
TFF3-202ENST00000398431 MLECQ14165 292 aa19.91■□□□□ 0.78
TFF3-202ENST00000398431 FBXO41Q8TF61 875 aa19.91■□□□□ 0.78
TFF3-202ENST00000398431 CDK11AQ9UQ88 783 aaPredicted RBP19.91■□□□□ 0.78
TFF3-202ENST00000398431 HSPA2P54652 639 aa19.89■□□□□ 0.77
TFF3-202ENST00000398431 PLPPR3Q6T4P5 718 aa19.89■□□□□ 0.77
TFF3-202ENST00000398431 KIF14Q15058 1648 aa19.88■□□□□ 0.77
TFF3-202ENST00000398431 TROQ12816 1431 aaPredicted RBP19.88■□□□□ 0.77
TFF3-202ENST00000398431 ATP10AO60312 1499 aa19.87■□□□□ 0.77
TFF3-202ENST00000398431 MYO5CQ9NQX4 1742 aa19.87■□□□□ 0.77
TFF3-202ENST00000398431 LRRIQ1Q96JM4 1722 aa19.86■□□□□ 0.77
TFF3-202ENST00000398431 AFAP1Q8N556 730 aa19.86■□□□□ 0.77
TFF3-202ENST00000398431 C9orf84Q5VXU9 1444 aa19.82■□□□□ 0.76
TFF3-202ENST00000398431 ARHGEF12Q9NZN5 1544 aa19.81■□□□□ 0.76
TFF3-202ENST00000398431 CEBPAP49715 358 aaPredicted RBP19.8■□□□□ 0.76
TFF3-202ENST00000398431 ARHGAP5Q13017 1502 aa19.8■□□□□ 0.76
TFF3-202ENST00000398431 FER1L4A9Z1Z3 1794 aa19.8■□□□□ 0.76
TFF3-202ENST00000398431 ZNF518AQ6AHZ1 1483 aa19.79■□□□□ 0.76
TFF3-202ENST00000398431 CLIP1P30622 1438 aa19.78■□□□□ 0.76
TFF3-202ENST00000398431 CDC42BPBQ9Y5S2 1711 aa19.78■□□□□ 0.76
TFF3-202ENST00000398431 KDM5CP41229 1560 aa19.78■□□□□ 0.76
TFF3-202ENST00000398431 CASKIN1Q8WXD9 1431 aa19.76■□□□□ 0.75
TFF3-202ENST00000398431 TRAPPC8Q9Y2L5 1435 aa19.74■□□□□ 0.75
TFF3-202ENST00000398431 MLH3Q9UHC1 1453 aa19.73■□□□□ 0.75
TFF3-202ENST00000398431 MYT1LQ9UL68 1186 aa19.72■□□□□ 0.75
TFF3-202ENST00000398431 DIP2CQ9Y2E4 1556 aa19.72■□□□□ 0.75
TFF3-202ENST00000398431 CCDC18Q5T9S5 1454 aa19.7■□□□□ 0.74
TFF3-202ENST00000398431 REREQ9P2R6 1566 aa19.7■□□□□ 0.74
TFF3-202ENST00000398431 PREX2Q70Z35 1606 aa19.69■□□□□ 0.74
TFF3-202ENST00000398431 ABCC1P33527 1531 aa19.68■□□□□ 0.74
TFF3-202ENST00000398431 CERKQ8TCT0 537 aa19.68■□□□□ 0.74
TFF3-202ENST00000398431 ABCA6Q8N139 1617 aa19.68■□□□□ 0.74
TFF3-202ENST00000398431 SETD1BQ9UPS6 1966 aaKnown RBP19.68■□□□□ 0.74
TFF3-202ENST00000398431 PREX1Q8TCU6 1659 aa19.66■□□□□ 0.74
TFF3-202ENST00000398431 AGLP35573 1532 aa19.66■□□□□ 0.74
TFF3-202ENST00000398431 CDC42BPAQ5VT25 1732 aa19.65■□□□□ 0.74
TFF3-202ENST00000398431 ITSN2Q9NZM3 1697 aa19.65■□□□□ 0.74
TFF3-202ENST00000398431 KIDINS220Q9ULH0 1771 aa19.64■□□□□ 0.73
TFF3-202ENST00000398431 FYCO1Q9BQS8 1478 aa19.63■□□□□ 0.73
TFF3-202ENST00000398431 STRCQ7RTU9 1775 aa19.62■□□□□ 0.73
TFF3-202ENST00000398431 GPATCH8Q9UKJ3 1502 aaKnown RBP19.62■□□□□ 0.73
TFF3-202ENST00000398431 ZNF777Q9ULD5 760 aaPredicted RBP19.61■□□□□ 0.73
TFF3-202ENST00000398431 C3P01024 1663 aa19.6■□□□□ 0.73
TFF3-202ENST00000398431 HNRNPMP52272 730 aaKnown RBP eCLIP19.6■□□□□ 0.73
TFF3-202ENST00000398431 UHRF1BP1Q6BDS2 1440 aa19.59■□□□□ 0.73
TFF3-202ENST00000398431 SAMD9LQ8IVG5 1584 aa19.58■□□□□ 0.73
TFF3-202ENST00000398431 DMRT2Q9Y5R5 561 aa19.58■□□□□ 0.72
TFF3-202ENST00000398431 ESF1Q9H501 851 aaKnown RBP19.56■□□□□ 0.72
TFF3-202ENST00000398431 SPAG9O60271 1321 aaKnown RBP19.55■□□□□ 0.72
TFF3-202ENST00000398431 CFDP1Q9UEE9 299 aaPredicted RBP19.54■□□□□ 0.72
TFF3-202ENST00000398431 SYCP2Q9BX26 1530 aa19.54■□□□□ 0.72
TFF3-202ENST00000398431 KIAA1107Q9UPP5 1409 aa19.53■□□□□ 0.72
TFF3-202ENST00000398431 CNTLNQ9NXG0 1405 aa19.52■□□□□ 0.72
TFF3-202ENST00000398431 ZMYM3Q14202 1370 aa19.51■□□□□ 0.71
TFF3-202ENST00000398431 PTPRTO14522 1441 aa19.51■□□□□ 0.71
TFF3-202ENST00000398431 CCNB3Q8WWL7 1395 aa19.5■□□□□ 0.71
TFF3-202ENST00000398431 ZNF644Q9H582 1327 aaPredicted RBP19.49■□□□□ 0.71
TFF3-202ENST00000398431 SUPT6HQ7KZ85 1726 aaKnown RBP19.48■□□□□ 0.71
TFF3-202ENST00000398431 PLEKHH2Q8IVE3 1493 aa19.48■□□□□ 0.71
TFF3-202ENST00000398431 MTUS2Q5JR59 1369 aa19.47■□□□□ 0.71
TFF3-202ENST00000398431 ATP7AQ04656 1500 aa19.47■□□□□ 0.71
TFF3-202ENST00000398431 INO80Q9ULG1 1556 aaPredicted RBP19.45■□□□□ 0.7
TFF3-202ENST00000398431 NPATQ14207 1427 aa19.45■□□□□ 0.7
TFF3-202ENST00000398431 NCOA1Q15788 1441 aa19.45■□□□□ 0.7
TFF3-202ENST00000398431 A2MP01023 1474 aa19.45■□□□□ 0.7
TFF3-202ENST00000398431 MROH2AA6NES4 1674 aa19.45■□□□□ 0.7
TFF3-202ENST00000398431 PLXNC1O60486 1568 aa19.44■□□□□ 0.7
TFF3-202ENST00000398431 MBD5Q9P267 1494 aa19.43■□□□□ 0.7
TFF3-202ENST00000398431 GGT6Q6P531 493 aa19.43■□□□□ 0.7
TFF3-202ENST00000398431 LTBP4Q8N2S1 1624 aa19.43■□□□□ 0.7
TFF3-202ENST00000398431 TIAM1Q13009 1591 aa19.4■□□□□ 0.7
TFF3-202ENST00000398431 CLTCQ00610 1675 aaKnown RBP19.4■□□□□ 0.7
TFF3-202ENST00000398431 PTPRKQ15262 1439 aa19.4■□□□□ 0.7
TFF3-202ENST00000398431 CAMSAP1Q5T5Y3 1602 aa19.4■□□□□ 0.7
TFF3-202ENST00000398431 PPP6R1Q9UPN7 881 aa19.39■□□□□ 0.69
TFF3-202ENST00000398431 NCKAP5LQ9HCH0 1330 aa19.39■□□□□ 0.69
TFF3-202ENST00000398431 CEP162Q5TB80 1403 aa19.38■□□□□ 0.69
TFF3-202ENST00000398431 EHBP1L1Q8N3D4 1523 aa19.36■□□□□ 0.69
TFF3-202ENST00000398431 RTEL1-TNFRSF6BF6WH68 1400 aa19.36■□□□□ 0.69
TFF3-202ENST00000398431 DHX29Q7Z478 1369 aaKnown RBP19.35■□□□□ 0.69
TFF3-202ENST00000398431 ADGBQ8N7X0 1667 aa19.35■□□□□ 0.69
TFF3-202ENST00000398431 ZNF335Q9H4Z2 1342 aaPredicted RBP19.31■□□□□ 0.68
TFF3-202ENST00000398431 PKD2Q13563 968 aa19.31■□□□□ 0.68
TFF3-202ENST00000398431 MYO3AQ8NEV4 1616 aa19.31■□□□□ 0.68
TFF3-202ENST00000398431 ZNF142P52746 1687 aaPredicted RBP19.3■□□□□ 0.68
TFF3-202ENST00000398431 PLA2R1Q13018 1463 aa19.3■□□□□ 0.68
TFF3-202ENST00000398431 IQSEC2Q5JU85 1478 aa19.3■□□□□ 0.68
TFF3-202ENST00000398431 CEP170BQ9Y4F5 1589 aaPredicted RBP19.3■□□□□ 0.68
TFF3-202ENST00000398431 TCOF1Q13428 1488 aaKnown RBP19.29■□□□□ 0.68
TFF3-202ENST00000398431 NCOA2Q15596 1464 aa19.29■□□□□ 0.68
TFF3-202ENST00000398431 KIF3BO15066 747 aa19.29■□□□□ 0.68
TFF3-202ENST00000398431 RSPH4AQ5TD94 716 aa19.29■□□□□ 0.68
TFF3-202ENST00000398431 FBXO31Q5XUX0 539 aaPredicted RBP19.29■□□□□ 0.68
TFF3-202ENST00000398431 ILDR2Q71H61 639 aa19.28■□□□□ 0.68
TFF3-202ENST00000398431 CAMSAP2Q08AD1 1489 aa19.26■□□□□ 0.67
TFF3-202ENST00000398431 CCDC141Q6ZP82 1450 aa19.26■□□□□ 0.67
TFF3-202ENST00000398431 A2ML1A8K2U0 1454 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 194.9 ms