RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 CNPY4Q8N129 248 aa16.25■□□□□ 0.19
CCBE1-201ENST00000398179 HIRIP3Q9BW71 556 aaPredicted RBP16.25■□□□□ 0.19
CCBE1-201ENST00000398179 NRDCO43847 1150 aa16.22■□□□□ 0.19
CCBE1-201ENST00000398179 DNAJC2Q99543 621 aaKnown RBP16.22■□□□□ 0.19
CCBE1-201ENST00000398179 RDXP35241 583 aaKnown RBP16.21■□□□□ 0.19
CCBE1-201ENST00000398179 NOL8Q76FK4 1167 aaKnown RBP16.21■□□□□ 0.19
CCBE1-201ENST00000398179 DEF6Q9H4E7 631 aa16.21■□□□□ 0.19
CCBE1-201ENST00000398179 CNKSR2Q8WXI2 1034 aa16.21■□□□□ 0.19
CCBE1-201ENST00000398179 RAD21O60216 631 aa16.2■□□□□ 0.18
CCBE1-201ENST00000398179 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.2■□□□□ 0.18
CCBE1-201ENST00000398179 FAM43AQ8N2R8 423 aa16.19■□□□□ 0.18
CCBE1-201ENST00000398179 GPS2Q13227 327 aa16.17■□□□□ 0.18
CCBE1-201ENST00000398179 MPHOSPH10O00566 681 aaKnown RBP16.17■□□□□ 0.18
CCBE1-201ENST00000398179 ANAPC15P60006 121 aa16.17■□□□□ 0.18
CCBE1-201ENST00000398179 LMOD3Q0VAK6 560 aa16.17■□□□□ 0.18
CCBE1-201ENST00000398179 PRDM10Q9NQV6 1147 aa16.16■□□□□ 0.18
CCBE1-201ENST00000398179 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.16■□□□□ 0.18
CCBE1-201ENST00000398179 USP8P40818 1118 aa16.15■□□□□ 0.18
CCBE1-201ENST00000398179 WDR43Q15061 677 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCBE1-201ENST00000398179 NAP1L1P55209 391 aaKnown RBP16.15■□□□□ 0.18
CCBE1-201ENST00000398179 PES1O00541 588 aaKnown RBP16.15■□□□□ 0.18
CCBE1-201ENST00000398179 PAF1Q8N7H5 531 aa16.15■□□□□ 0.18
CCBE1-201ENST00000398179 DYDC1Q8WWB3 177 aa16.15■□□□□ 0.18
CCBE1-201ENST00000398179 GOLGA6L4A6NEF3 574 aa16.15■□□□□ 0.18
CCBE1-201ENST00000398179 DDX10Q13206 875 aaKnown RBP16.14■□□□□ 0.17
CCBE1-201ENST00000398179 CHMP4BQ9H444 224 aaKnown RBP16.14■□□□□ 0.17
CCBE1-201ENST00000398179 HTATSF1O43719 755 aaKnown RBP16.13■□□□□ 0.17
CCBE1-201ENST00000398179 TSHZ2Q9NRE2 1034 aa16.13■□□□□ 0.17
CCBE1-201ENST00000398179 CCP110O43303 1012 aa16.13■□□□□ 0.17
CCBE1-201ENST00000398179 MIER1Q8N108 512 aa16.12■□□□□ 0.17
CCBE1-201ENST00000398179 MNS1Q8NEH6 495 aa16.12■□□□□ 0.17
CCBE1-201ENST00000398179 SUPT16HQ9Y5B9 1047 aaKnown RBP16.12■□□□□ 0.17
CCBE1-201ENST00000398179 HDAC5Q9UQL6 1122 aa16.11■□□□□ 0.17
CCBE1-201ENST00000398179 HMGN5P82970 282 aaKnown RBP16.1■□□□□ 0.17
CCBE1-201ENST00000398179 ISY1Q9ULR0 285 aaKnown RBP16.1■□□□□ 0.17
CCBE1-201ENST00000398179 CSPP1Q1MSJ5 1256 aa16.1■□□□□ 0.17
CCBE1-201ENST00000398179 TDO2P48775 406 aa16.1■□□□□ 0.17
CCBE1-201ENST00000398179 LIG1P18858 919 aa16.09■□□□□ 0.17
CCBE1-201ENST00000398179 SH3BGRP55822 239 aaPredicted RBP16.08■□□□□ 0.16
CCBE1-201ENST00000398179 GOLIM4O00461 696 aa16.08■□□□□ 0.16
CCBE1-201ENST00000398179 FAM13BQ9NYF5 915 aa16.07■□□□□ 0.16
CCBE1-201ENST00000398179 AAMPQ13685 434 aa16.06■□□□□ 0.16
CCBE1-201ENST00000398179 TCERG1O14776 1098 aaKnown RBP16.05■□□□□ 0.16
CCBE1-201ENST00000398179 GIMAP7Q8NHV1 300 aa16.05■□□□□ 0.16
CCBE1-201ENST00000398179 GSE1Q14687 1217 aa16.05■□□□□ 0.16
CCBE1-201ENST00000398179 ZRSR2Q15696 482 aaKnown RBP16.04■□□□□ 0.16
CCBE1-201ENST00000398179 GOLGA6L19H0YKK7 550 aa16.04■□□□□ 0.16
CCBE1-201ENST00000398179 RSPH4AQ5TD94 716 aa16.03■□□□□ 0.16
CCBE1-201ENST00000398179 PLCD3Q8N3E9 789 aa16.03■□□□□ 0.16
CCBE1-201ENST00000398179 KCTD17Q8N5Z5 321 aa16.02■□□□□ 0.16
CCBE1-201ENST00000398179 H0YHG0 523 aa16.02■□□□□ 0.15
CCBE1-201ENST00000398179 SARNPP82979 210 aaKnown RBP16.02■□□□□ 0.15
CCBE1-201ENST00000398179 TEX2Q8IWB9 1127 aa16.01■□□□□ 0.15
CCBE1-201ENST00000398179 VGFO15240 615 aaPredicted RBP16.01■□□□□ 0.15
CCBE1-201ENST00000398179 GORABQ5T7V8 394 aa16.01■□□□□ 0.15
CCBE1-201ENST00000398179 PDCL3Q9H2J4 239 aa16.01■□□□□ 0.15
CCBE1-201ENST00000398179 GTF2A1P52655 376 aaPredicted RBP16■□□□□ 0.15
CCBE1-201ENST00000398179 NPM1P06748 294 aaKnown RBP eCLIP16■□□□□ 0.15
CCBE1-201ENST00000398179 PHF14O94880 888 aa16■□□□□ 0.15
CCBE1-201ENST00000398179 TRIM6-TRIM34B2RNG4 842 aa15.99■□□□□ 0.15
CCBE1-201ENST00000398179 TRIM34Q9BYJ4 488 aa15.99■□□□□ 0.15
CCBE1-201ENST00000398179 DZIP1Q86YF9 867 aaKnown RBP15.98■□□□□ 0.15
CCBE1-201ENST00000398179 GOLGA6L10A6NI86 522 aa15.98■□□□□ 0.15
CCBE1-201ENST00000398179 E9PSI1 815 aa15.98■□□□□ 0.15
CCBE1-201ENST00000398179 CCDC180Q9P1Z9 1646 aa15.98■□□□□ 0.15
CCBE1-201ENST00000398179 FANCIQ9NVI1 1328 aa15.97■□□□□ 0.15
CCBE1-201ENST00000398179 HSP90AB3PQ58FF7 597 aa15.96■□□□□ 0.15
CCBE1-201ENST00000398179 CTR9Q6PD62 1173 aa15.96■□□□□ 0.15
CCBE1-201ENST00000398179 CCDC34Q96HJ3 373 aa15.95■□□□□ 0.14
CCBE1-201ENST00000398179 CALCOCO1Q9P1Z2 691 aa15.95■□□□□ 0.14
CCBE1-201ENST00000398179 BANK1Q8NDB2 785 aa15.95■□□□□ 0.14
CCBE1-201ENST00000398179 SEPT14Q6ZU15 432 aa15.94■□□□□ 0.14
CCBE1-201ENST00000398179 ZRSR1Q15695 479 aaKnown RBP15.93■□□□□ 0.14
CCBE1-201ENST00000398179 KIF3AQ9Y496 699 aa15.93■□□□□ 0.14
CCBE1-201ENST00000398179 FBXW7Q969H0 707 aa15.93■□□□□ 0.14
CCBE1-201ENST00000398179 CALD1Q05682 793 aaKnown RBP15.92■□□□□ 0.14
CCBE1-201ENST00000398179 NOC3LQ8WTT2 800 aaKnown RBP15.92■□□□□ 0.14
CCBE1-201ENST00000398179 CCDC191Q8NCU4 936 aa15.92■□□□□ 0.14
CCBE1-201ENST00000398179 CCDC97Q96F63 343 aaPredicted RBP15.91■□□□□ 0.14
CCBE1-201ENST00000398179 HSP90AB4PQ58FF6 505 aa15.91■□□□□ 0.14
CCBE1-201ENST00000398179 MYH16Q9H6N6 1097 aa15.91■□□□□ 0.14
CCBE1-201ENST00000398179 MRS2Q9HD23 443 aa15.91■□□□□ 0.14
CCBE1-201ENST00000398179 TONSLQ96HA7 1378 aa15.9■□□□□ 0.14
CCBE1-201ENST00000398179 TMC1Q8TDI8 760 aa15.9■□□□□ 0.14
CCBE1-201ENST00000398179 ZBTB12Q9Y330 459 aaPredicted RBP15.9■□□□□ 0.14
CCBE1-201ENST00000398179 RASSF8Q8NHQ8 419 aa15.9■□□□□ 0.14
CCBE1-201ENST00000398179 TSPY4P0CV99 314 aa15.9■□□□□ 0.14
CCBE1-201ENST00000398179 TSPY10P0CW01 314 aa15.9■□□□□ 0.14
CCBE1-201ENST00000398179 HDAC1Q13547 482 aaPredicted RBP15.9■□□□□ 0.14
CCBE1-201ENST00000398179 GOLGA6L10A0A0M3HER8 536 aa15.9■□□□□ 0.14
CCBE1-201ENST00000398179 TNNT1P13805 278 aa15.89■□□□□ 0.13
CCBE1-201ENST00000398179 ZFP91Q96JP5 570 aaPredicted RBP15.89■□□□□ 0.13
CCBE1-201ENST00000398179 WDR70Q9NW82 654 aa15.89■□□□□ 0.13
CCBE1-201ENST00000398179 TMCO4Q5TGY1 634 aa15.88■□□□□ 0.13
CCBE1-201ENST00000398179 KNSTRNQ9Y448 316 aa15.88■□□□□ 0.13
CCBE1-201ENST00000398179 LETM1O95202 739 aaPredicted RBP15.88■□□□□ 0.13
CCBE1-201ENST00000398179 IPO9Q96P70 1041 aaKnown RBP15.88■□□□□ 0.13
CCBE1-201ENST00000398179 RRP12Q5JTH9 1297 aaKnown RBP15.88■□□□□ 0.13
CCBE1-201ENST00000398179 PPP4R2Q9NY27 417 aa15.87■□□□□ 0.13
CCBE1-201ENST00000398179 NEUROD2Q15784 382 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms