RNA–Protein interactions for RNA: ENST00000398048.4

SCML2-202, Transcript of Scm polycomb group protein like 2, humanhuman

TSL 1 (best) BASIC

Gene SCML2, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2-202ENST00000398048 RGL2O15211 777 aa12.11□□□□□ -0.47
SCML2-202ENST00000398048 RSF1Q96T23 1441 aaPredicted RBP12.09□□□□□ -0.47
SCML2-202ENST00000398048 SLC24A1O60721 1099 aa12.09□□□□□ -0.47
SCML2-202ENST00000398048 BOLA1Q9Y3E2 137 aa12.09□□□□□ -0.47
SCML2-202ENST00000398048 CADPSQ9ULU8 1353 aa12.08□□□□□ -0.48
SCML2-202ENST00000398048 PDS5BQ9NTI5 1447 aa12.08□□□□□ -0.48
SCML2-202ENST00000398048 FAM163AQ96GL9 167 aaPredicted RBP12.08□□□□□ -0.48
SCML2-202ENST00000398048 DPY19L2Q6NUT2 758 aa12.07□□□□□ -0.48
SCML2-202ENST00000398048 CUX2O14529 1486 aa12.06□□□□□ -0.48
SCML2-202ENST00000398048 SNPHO15079 494 aa12.06□□□□□ -0.48
SCML2-202ENST00000398048 NLRP6P59044 892 aa12.06□□□□□ -0.48
SCML2-202ENST00000398048 LAMC3Q9Y6N6 1575 aa12.03□□□□□ -0.48
SCML2-202ENST00000398048 NESP48681 1621 aa12.03□□□□□ -0.48
SCML2-202ENST00000398048 DNAJC5Q9H3Z4 198 aa12.02□□□□□ -0.49
SCML2-202ENST00000398048 RTN4Q9NQC3 1192 aaKnown RBP12.02□□□□□ -0.49
SCML2-202ENST00000398048 PHF8Q9UPP1 1060 aa12.01□□□□□ -0.49
SCML2-202ENST00000398048 WIZO95785 1651 aa11.98□□□□□ -0.49
SCML2-202ENST00000398048 POTEMA6NI47 508 aa11.96□□□□□ -0.49
SCML2-202ENST00000398048 POTEGQ6S5H5 508 aa11.95□□□□□ -0.5
SCML2-202ENST00000398048 TMEM121BQ9BXQ6 578 aaPredicted RBP11.95□□□□□ -0.5
SCML2-202ENST00000398048 CFTRP13569 1480 aa11.93□□□□□ -0.5
SCML2-202ENST00000398048 MICALL2Q8IY33 904 aa11.92□□□□□ -0.5
SCML2-202ENST00000398048 MS4A4AQ96JQ5 239 aa11.92□□□□□ -0.5
SCML2-202ENST00000398048 MFRPQ9BY79 579 aa11.91□□□□□ -0.5
SCML2-202ENST00000398048 TOP2AP11388 1531 aaKnown RBP11.91□□□□□ -0.5
SCML2-202ENST00000398048 CHGAP10645 457 aaKnown RBP11.9□□□□□ -0.5
SCML2-202ENST00000398048 HS6ST3Q8IZP7 471 aa11.9□□□□□ -0.5
SCML2-202ENST00000398048 FBXO22Q8NEZ5 403 aa11.9□□□□□ -0.5
SCML2-202ENST00000398048 ST18O60284 1047 aa11.88□□□□□ -0.51
SCML2-202ENST00000398048 PCDH10Q9P2E7 1040 aa11.88□□□□□ -0.51
SCML2-202ENST00000398048 LCE2DQ5TA82 110 aaPredicted RBP11.85□□□□□ -0.51
SCML2-202ENST00000398048 CCDC88BA6NC98 1476 aa11.84□□□□□ -0.51
SCML2-202ENST00000398048 FANCD2Q9BXW9 1451 aa11.84□□□□□ -0.51
SCML2-202ENST00000398048 MRC2Q9UBG0 1479 aa11.84□□□□□ -0.51
SCML2-202ENST00000398048 CEP164Q9UPV0 1460 aa11.84□□□□□ -0.51
SCML2-202ENST00000398048 RYDENQ9NUL5 291 aaKnown RBP11.84□□□□□ -0.51
SCML2-202ENST00000398048 DOK7Q18PE1 504 aa11.82□□□□□ -0.52
SCML2-202ENST00000398048 ZNF710Q8N1W2 664 aa11.82□□□□□ -0.52
SCML2-202ENST00000398048 RIMBP2O15034 1052 aa11.81□□□□□ -0.52
SCML2-202ENST00000398048 THOC2Q8NI27 1593 aaKnown RBP11.79□□□□□ -0.52
SCML2-202ENST00000398048 WDR62O43379 1518 aa11.77□□□□□ -0.53
SCML2-202ENST00000398048 KIF21AQ7Z4S6 1674 aa11.76□□□□□ -0.53
SCML2-202ENST00000398048 ABCC8Q09428 1581 aa11.74□□□□□ -0.53
SCML2-202ENST00000398048 SUPT5HO00267 1087 aaKnown RBP11.73□□□□□ -0.53
SCML2-202ENST00000398048 EMP3P54852 163 aa11.73□□□□□ -0.53
SCML2-202ENST00000398048 TMEM92Q6UXU6 159 aa11.73□□□□□ -0.53
SCML2-202ENST00000398048 TMC2Q8TDI7 906 aa11.73□□□□□ -0.53
SCML2-202ENST00000398048 HOXB3P14651 431 aaPredicted RBP11.71□□□□□ -0.53
SCML2-202ENST00000398048 MARVELD3Q96A59 401 aa11.71□□□□□ -0.53
SCML2-202ENST00000398048 ZSWIM6Q9HCJ5 1215 aa11.7□□□□□ -0.54
SCML2-202ENST00000398048 PPP1R37O75864 691 aa11.69□□□□□ -0.54
SCML2-202ENST00000398048 CDAN1Q8IWY9 1227 aa11.69□□□□□ -0.54
SCML2-202ENST00000398048 URB2Q14146 1524 aaKnown RBP11.69□□□□□ -0.54
SCML2-202ENST00000398048 HOXB1P14653 301 aaPredicted RBP11.66□□□□□ -0.54
SCML2-202ENST00000398048 PLSCR2Q9NRY7 297 aa11.66□□□□□ -0.54
SCML2-202ENST00000398048 C2orf72A6NCS6 295 aa11.65□□□□□ -0.54
SCML2-202ENST00000398048 NKX1-1Q15270 411 aaPredicted RBP11.65□□□□□ -0.54
SCML2-202ENST00000398048 IFT140Q96RY7 1462 aa11.64□□□□□ -0.55
SCML2-202ENST00000398048 KIF3CO14782 793 aa11.63□□□□□ -0.55
SCML2-202ENST00000398048 FAM205CA6NFA0 338 aa11.61□□□□□ -0.55
SCML2-202ENST00000398048 TOPBP1Q92547 1522 aa11.61□□□□□ -0.55
SCML2-202ENST00000398048 ERBB3P21860 1342 aa11.6□□□□□ -0.55
SCML2-202ENST00000398048 HS3ST6Q96QI5 342 aa11.58□□□□□ -0.56
SCML2-202ENST00000398048 SOGA1O94964 1423 aa11.57□□□□□ -0.56
SCML2-202ENST00000398048 GPR153Q6NV75 609 aa11.57□□□□□ -0.56
SCML2-202ENST00000398048 GPHNQ9NQX3 736 aaPredicted RBP11.57□□□□□ -0.56
SCML2-202ENST00000398048 DNMBPQ6XZF7 1577 aa11.55□□□□□ -0.56
SCML2-202ENST00000398048 PRDM2Q13029 1718 aa11.55□□□□□ -0.56
SCML2-202ENST00000398048 GTPBP6O43824 516 aaPredicted RBP11.55□□□□□ -0.56
SCML2-202ENST00000398048 SLC34A2O95436 690 aa11.55□□□□□ -0.56
SCML2-202ENST00000398048 ARSIQ5FYB1 569 aa11.55□□□□□ -0.56
SCML2-202ENST00000398048 FOXK1P85037 733 aa11.54□□□□□ -0.56
SCML2-202ENST00000398048 BBXQ8WY36 941 aaPredicted RBP11.53□□□□□ -0.56
SCML2-202ENST00000398048 ZNF608Q9ULD9 1512 aaPredicted RBP11.52□□□□□ -0.57
SCML2-202ENST00000398048 PDE4AP27815 886 aa11.52□□□□□ -0.57
SCML2-202ENST00000398048 AQRO60306 1485 aaKnown RBP eCLIP11.5□□□□□ -0.57
SCML2-202ENST00000398048 POLA1P09884 1462 aaPredicted RBP11.5□□□□□ -0.57
SCML2-202ENST00000398048 TBC1D12O60347 775 aa11.5□□□□□ -0.57
SCML2-202ENST00000398048 VARS2Q5ST30 1063 aaKnown RBP11.5□□□□□ -0.57
SCML2-202ENST00000398048 PLPP6Q8IY26 295 aa11.5□□□□□ -0.57
SCML2-202ENST00000398048 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.5□□□□□ -0.57
SCML2-202ENST00000398048 TDRD9Q8NDG6 1382 aaKnown RBP11.49□□□□□ -0.57
SCML2-202ENST00000398048 PCDHGA4Q9Y5G9 962 aa11.49□□□□□ -0.57
SCML2-202ENST00000398048 CHMP7Q8WUX9 453 aaPredicted RBP11.48□□□□□ -0.57
SCML2-202ENST00000398048 DSG2Q14126 1118 aa11.47□□□□□ -0.57
SCML2-202ENST00000398048 RAD54L2Q9Y4B4 1467 aa11.46□□□□□ -0.57
SCML2-202ENST00000398048 POTEB3A0JP26 581 aa11.45□□□□□ -0.58
SCML2-202ENST00000398048 ZNF316A6NFI3 1004 aaPredicted RBP11.45□□□□□ -0.58
SCML2-202ENST00000398048 POTEBQ6S5H4 581 aa11.45□□□□□ -0.58
SCML2-202ENST00000398048 TARBP1Q13395 1621 aaKnown RBP11.45□□□□□ -0.58
SCML2-202ENST00000398048 FGD5Q6ZNL6 1462 aa11.45□□□□□ -0.58
SCML2-202ENST00000398048 NUDT7P0C024 238 aa11.44□□□□□ -0.58
SCML2-202ENST00000398048 PTCD2Q8WV60 388 aaKnown RBP11.44□□□□□ -0.58
SCML2-202ENST00000398048 KHSRPQ92945 711 aaKnown RBP eCLIP11.44□□□□□ -0.585e-11■■■■□ 20.5
SCML2-202ENST00000398048 CRISPLD2Q9H0B8 497 aa11.44□□□□□ -0.58
SCML2-202ENST00000398048 WRNQ14191 1432 aaPredicted RBP eCLIP11.43□□□□□ -0.58
SCML2-202ENST00000398048 CUX1P39880 1505 aa11.43□□□□□ -0.58
SCML2-202ENST00000398048 ZNF687Q8N1G0 1237 aa11.43□□□□□ -0.58
SCML2-202ENST00000398048 PSDA5PKW4 1024 aaPredicted RBP11.41□□□□□ -0.58
SCML2-202ENST00000398048 PPP1R15BQ5SWA1 713 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms