RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 CFDP1Q9UEE9 299 aaPredicted RBP29.58■■■□□ 2.33
COLCA2-201ENST00000398035 MAP3K1Q13233 1512 aa29.55■■■□□ 2.32
COLCA2-201ENST00000398035 MYO5CQ9NQX4 1742 aa29.55■■■□□ 2.32
COLCA2-201ENST00000398035 EHBP1L1Q8N3D4 1523 aa29.54■■■□□ 2.32
COLCA2-201ENST00000398035 GPATCH8Q9UKJ3 1502 aaKnown RBP29.54■■■□□ 2.32
COLCA2-201ENST00000398035 ZNF777Q9ULD5 760 aaPredicted RBP29.52■■■□□ 2.32
COLCA2-201ENST00000398035 MAGI2Q86UL8 1455 aa29.51■■■□□ 2.31
COLCA2-201ENST00000398035 POGZQ7Z3K3 1410 aa29.5■■■□□ 2.31
COLCA2-201ENST00000398035 TIAM1Q13009 1591 aa29.49■■■□□ 2.31
COLCA2-201ENST00000398035 AFAP1Q8N556 730 aa29.48■■■□□ 2.31
COLCA2-201ENST00000398035 KDM4FA0A1W2PPD8 638 aa29.47■■■□□ 2.31
COLCA2-201ENST00000398035 LRRC9Q6ZRR7 1453 aa29.47■■■□□ 2.31
COLCA2-201ENST00000398035 ZNF518AQ6AHZ1 1483 aa29.46■■■□□ 2.31
COLCA2-201ENST00000398035 KANK4Q5T7N3 995 aaPredicted RBP29.45■■■□□ 2.3
COLCA2-201ENST00000398035 PREX2Q70Z35 1606 aa29.44■■■□□ 2.3
COLCA2-201ENST00000398035 FRMPD1Q5SYB0 1578 aa29.44■■■□□ 2.3
COLCA2-201ENST00000398035 KIAA1107Q9UPP5 1409 aa29.42■■■□□ 2.3
COLCA2-201ENST00000398035 MYT1LQ9UL68 1186 aa29.42■■■□□ 2.3
COLCA2-201ENST00000398035 NCOA2Q15596 1464 aa29.41■■■□□ 2.3
COLCA2-201ENST00000398035 PLEKHH2Q8IVE3 1493 aa29.41■■■□□ 2.3
COLCA2-201ENST00000398035 ZMYM4Q5VZL5 1548 aa29.41■■■□□ 2.3
COLCA2-201ENST00000398035 CDC42BPBQ9Y5S2 1711 aa29.4■■■□□ 2.3
COLCA2-201ENST00000398035 ARID4BQ4LE39 1312 aaPredicted RBP29.39■■■□□ 2.3
COLCA2-201ENST00000398035 HNRNPMP52272 730 aaKnown RBP eCLIP29.38■■■□□ 2.29
COLCA2-201ENST00000398035 RICTORQ6R327 1708 aa29.38■■■□□ 2.29
COLCA2-201ENST00000398035 RSPH4AQ5TD94 716 aa29.36■■■□□ 2.29
COLCA2-201ENST00000398035 TRAPPC8Q9Y2L5 1435 aa29.35■■■□□ 2.29
COLCA2-201ENST00000398035 CDC42BPAQ5VT25 1732 aa29.34■■■□□ 2.29
COLCA2-201ENST00000398035 ABCC1P33527 1531 aa29.34■■■□□ 2.29
COLCA2-201ENST00000398035 ZFYVE16Q7Z3T8 1539 aa29.34■■■□□ 2.29
COLCA2-201ENST00000398035 ARHGEF12Q9NZN5 1544 aa29.34■■■□□ 2.29
COLCA2-201ENST00000398035 SUPT6HQ7KZ85 1726 aaKnown RBP29.34■■■□□ 2.29
COLCA2-201ENST00000398035 YEATS2Q9ULM3 1422 aa29.32■■■□□ 2.28
COLCA2-201ENST00000398035 MLH3Q9UHC1 1453 aa29.32■■■□□ 2.28
COLCA2-201ENST00000398035 ATP10AO60312 1499 aa29.31■■■□□ 2.28
COLCA2-201ENST00000398035 ZNF644Q9H582 1327 aaPredicted RBP29.31■■■□□ 2.28
COLCA2-201ENST00000398035 KDM5CP41229 1560 aa29.29■■■□□ 2.28
COLCA2-201ENST00000398035 SPAG9O60271 1321 aaKnown RBP29.29■■■□□ 2.28
COLCA2-201ENST00000398035 ARHGEF40Q8TER5 1519 aa29.29■■■□□ 2.28
COLCA2-201ENST00000398035 SAMD9LQ8IVG5 1584 aa29.27■■■□□ 2.28
COLCA2-201ENST00000398035 ITSN2Q9NZM3 1697 aa29.25■■■□□ 2.27
COLCA2-201ENST00000398035 C9orf84Q5VXU9 1444 aa29.24■■■□□ 2.27
COLCA2-201ENST00000398035 MIA2Q96PC5 1412 aa29.24■■■□□ 2.27
COLCA2-201ENST00000398035 SYCP2Q9BX26 1530 aa29.23■■■□□ 2.27
COLCA2-201ENST00000398035 MYOM3Q5VTT5 1437 aa29.21■■■□□ 2.27
COLCA2-201ENST00000398035 MBD5Q9P267 1494 aa29.2■■■□□ 2.27
COLCA2-201ENST00000398035 HECW2Q9P2P5 1572 aa29.19■■■□□ 2.26
COLCA2-201ENST00000398035 TSPY4P0CV99 314 aa29.19■■■□□ 2.26
COLCA2-201ENST00000398035 TSPY10P0CW01 314 aa29.19■■■□□ 2.26
COLCA2-201ENST00000398035 CAMSAP2Q08AD1 1489 aa29.14■■■□□ 2.26
COLCA2-201ENST00000398035 RTEL1-TNFRSF6BF6WH68 1400 aa29.14■■■□□ 2.26
COLCA2-201ENST00000398035 MLECQ14165 292 aa29.12■■■□□ 2.25
COLCA2-201ENST00000398035 CCDC141Q6ZP82 1450 aa29.1■■■□□ 2.25
COLCA2-201ENST00000398035 DIP2CQ9Y2E4 1556 aa29.08■■■□□ 2.25
COLCA2-201ENST00000398035 REREQ9P2R6 1566 aa29.07■■■□□ 2.24
COLCA2-201ENST00000398035 ATP7AQ04656 1500 aa29.06■■■□□ 2.24
COLCA2-201ENST00000398035 AGLP35573 1532 aa29.04■■■□□ 2.24
COLCA2-201ENST00000398035 BCORL1Q5H9F3 1711 aa29.04■■■□□ 2.24
COLCA2-201ENST00000398035 ESF1Q9H501 851 aaKnown RBP29.03■■■□□ 2.24
COLCA2-201ENST00000398035 KIDINS220Q9ULH0 1771 aa29.03■■■□□ 2.24
COLCA2-201ENST00000398035 ADAMTSL3P82987 1691 aa29.03■■■□□ 2.24
COLCA2-201ENST00000398035 FGD6Q6ZV73 1430 aa29.02■■■□□ 2.24
COLCA2-201ENST00000398035 ARHGEF5Q12774 1597 aa29.02■■■□□ 2.24
COLCA2-201ENST00000398035 PTPRMP28827 1452 aa29.01■■■□□ 2.23
COLCA2-201ENST00000398035 ABCA6Q8N139 1617 aa29.01■■■□□ 2.23
COLCA2-201ENST00000398035 A2MP01023 1474 aa29■■■□□ 2.23
COLCA2-201ENST00000398035 DHX29Q7Z478 1369 aaKnown RBP28.99■■■□□ 2.23
COLCA2-201ENST00000398035 PPP6R1Q9UPN7 881 aa28.98■■■□□ 2.23
COLCA2-201ENST00000398035 INO80Q9ULG1 1556 aaPredicted RBP28.97■■■□□ 2.23
COLCA2-201ENST00000398035 TCOF1Q13428 1488 aaKnown RBP28.93■■■□□ 2.22
COLCA2-201ENST00000398035 SIGLEC1Q9BZZ2 1709 aa28.91■■■□□ 2.22
COLCA2-201ENST00000398035 MADDQ8WXG6 1647 aa28.91■■■□□ 2.22
COLCA2-201ENST00000398035 FAM50AQ14320 339 aaKnown RBP28.91■■■□□ 2.22
COLCA2-201ENST00000398035 GGT6Q6P531 493 aa28.9■■■□□ 2.22
COLCA2-201ENST00000398035 PTPN23Q9H3S7 1636 aa28.9■■■□□ 2.22
COLCA2-201ENST00000398035 ABCC5O15440 1437 aa28.88■■■□□ 2.21
COLCA2-201ENST00000398035 CNTLNQ9NXG0 1405 aa28.88■■■□□ 2.21
COLCA2-201ENST00000398035 KIF3BO15066 747 aa28.87■■■□□ 2.21
COLCA2-201ENST00000398035 PPARGC1BQ86YN6 1023 aaKnown RBP28.87■■■□□ 2.21
COLCA2-201ENST00000398035 PLXNC1O60486 1568 aa28.86■■■□□ 2.21
COLCA2-201ENST00000398035 DAPK1P53355 1430 aa28.84■■■□□ 2.21
COLCA2-201ENST00000398035 PLPPR3Q6T4P5 718 aa28.84■■■□□ 2.21
COLCA2-201ENST00000398035 MAST1Q9Y2H9 1570 aa28.83■■■□□ 2.21
COLCA2-201ENST00000398035 SHANK2Q9UPX8 1470 aa28.83■■■□□ 2.21
COLCA2-201ENST00000398035 ADGBQ8N7X0 1667 aa28.83■■■□□ 2.21
COLCA2-201ENST00000398035 CEBPAP49715 358 aaPredicted RBP28.8■■■□□ 2.2
COLCA2-201ENST00000398035 RRP7BPQ9NSQ0 103 aa28.79■■■□□ 2.2
COLCA2-201ENST00000398035 ANKRD30AQ9BXX3 1397 aa28.79■■■□□ 2.2
COLCA2-201ENST00000398035 RIMS1Q86UR5 1692 aaKnown RBP28.79■■■□□ 2.2
COLCA2-201ENST00000398035 CHIC2Q9UKJ5 165 aa28.77■■■□□ 2.2
COLCA2-201ENST00000398035 ZMYM3Q14202 1370 aa28.76■■■□□ 2.2
COLCA2-201ENST00000398035 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.76■■■□□ 2.23e-8■■□□□ 13.3
COLCA2-201ENST00000398035 KIF15Q9NS87 1388 aa28.76■■■□□ 2.19
COLCA2-201ENST00000398035 FER1L4A9Z1Z3 1794 aa28.75■■■□□ 2.19
COLCA2-201ENST00000398035 DNMT1P26358 1616 aaKnown RBP28.73■■■□□ 2.19
COLCA2-201ENST00000398035 WASHC2CQ9Y4E1 1318 aa28.73■■■□□ 2.19
COLCA2-201ENST00000398035 DUOX2Q9NRD8 1548 aa28.72■■■□□ 2.19
COLCA2-201ENST00000398035 NCOA1Q15788 1441 aa28.72■■■□□ 2.19
COLCA2-201ENST00000398035 ERBINQ96RT1 1412 aa28.68■■■□□ 2.18
COLCA2-201ENST00000398035 FAM135AQ9P2D6 1515 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms