RNA–Protein interactions for RNA: ENST00000397968.3

CDH7-202, Transcript of cadherin 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH7, Length 12,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH7-202ENST00000397968 CCDC34Q96HJ3 373 aa12.57□□□□□ -0.4
CDH7-202ENST00000397968 HDAC5Q9UQL6 1122 aa12.57□□□□□ -0.4
CDH7-202ENST00000397968 PHF14O94880 888 aa12.56□□□□□ -0.4
CDH7-202ENST00000397968 DRC7Q8IY82 874 aa12.56□□□□□ -0.4
CDH7-202ENST00000397968 POGKQ9P215 609 aa12.56□□□□□ -0.4
CDH7-202ENST00000397968 NEUROD2Q15784 382 aa12.55□□□□□ -0.4
CDH7-202ENST00000397968 C14orf37Q86TY3 774 aa12.54□□□□□ -0.4
CDH7-202ENST00000397968 RCAN3Q9UKA8 241 aa12.54□□□□□ -0.4
CDH7-202ENST00000397968 TPM4P67936 248 aa12.53□□□□□ -0.4
CDH7-202ENST00000397968 DCAF11Q8TEB1 546 aa12.53□□□□□ -0.4
CDH7-202ENST00000397968 RTN4Q9NQC3 1192 aaKnown RBP12.53□□□□□ -0.4
CDH7-202ENST00000397968 GOLGA6L3A6NEY3 463 aa12.53□□□□□ -0.4
CDH7-202ENST00000397968 CC2D1BQ5T0F9 858 aaKnown RBP12.53□□□□□ -0.4
CDH7-202ENST00000397968 SIN3AQ96ST3 1273 aa12.53□□□□□ -0.4
CDH7-202ENST00000397968 KIAA1211Q6ZU35 1233 aa12.52□□□□□ -0.4
CDH7-202ENST00000397968 SMARCA2P51531 1590 aa12.51□□□□□ -0.41
CDH7-202ENST00000397968 RSPH6AQ9H0K4 717 aa12.51□□□□□ -0.41
CDH7-202ENST00000397968 U2SURPO15042 1029 aaKnown RBP12.5□□□□□ -0.41
CDH7-202ENST00000397968 GOLGA2Q08379 1002 aa12.5□□□□□ -0.41
CDH7-202ENST00000397968 CARMIL1Q5VZK9 1371 aa12.5□□□□□ -0.41
CDH7-202ENST00000397968 CHMP4CQ96CF2 233 aa12.49□□□□□ -0.41
CDH7-202ENST00000397968 DDX11L8A8MPP1 907 aa12.49□□□□□ -0.41
CDH7-202ENST00000397968 KCNH8Q96L42 1107 aa12.49□□□□□ -0.41
CDH7-202ENST00000397968 MORC1Q86VD1 984 aa12.49□□□□□ -0.41
CDH7-202ENST00000397968 SKOR2Q2VWA4 1001 aaPredicted RBP12.48□□□□□ -0.41
CDH7-202ENST00000397968 KIF3AQ9Y496 699 aa12.47□□□□□ -0.41
CDH7-202ENST00000397968 RTF1Q92541 710 aaKnown RBP12.47□□□□□ -0.41
CDH7-202ENST00000397968 GNL2Q13823 731 aaKnown RBP12.46□□□□□ -0.41
CDH7-202ENST00000397968 GOLGA6L1Q8N7Z2 621 aa12.46□□□□□ -0.41
CDH7-202ENST00000397968 CUX2O14529 1486 aa12.46□□□□□ -0.42
CDH7-202ENST00000397968 RAB3GAP2Q9H2M9 1393 aa12.46□□□□□ -0.42
CDH7-202ENST00000397968 HSPA5P11021 654 aaKnown RBP12.46□□□□□ -0.42
CDH7-202ENST00000397968 HMMRO75330 724 aa12.45□□□□□ -0.42
CDH7-202ENST00000397968 CARMIL2Q6F5E8 1435 aa12.45□□□□□ -0.42
CDH7-202ENST00000397968 NGEFQ8N5V2 710 aa12.45□□□□□ -0.42
CDH7-202ENST00000397968 NLRP13Q86W25 1043 aa12.45□□□□□ -0.42
CDH7-202ENST00000397968 RSPH4AQ5TD94 716 aa12.44□□□□□ -0.42
CDH7-202ENST00000397968 ANKRD30AQ9BXX3 1397 aa12.44□□□□□ -0.42
CDH7-202ENST00000397968 GPATCH3Q96I76 525 aa12.44□□□□□ -0.42
CDH7-202ENST00000397968 ATP6V1DQ9Y5K8 247 aa12.44□□□□□ -0.42
CDH7-202ENST00000397968 HDGFL2Q7Z4V5 671 aaPredicted RBP12.44□□□□□ -0.42
CDH7-202ENST00000397968 ST18O60284 1047 aa12.44□□□□□ -0.42
CDH7-202ENST00000397968 ZBTB7CA1YPR0 619 aa12.43□□□□□ -0.42
CDH7-202ENST00000397968 CCDC18Q5T9S5 1454 aa12.43□□□□□ -0.42
CDH7-202ENST00000397968 EIF4G1Q04637 1599 aaKnown RBP12.43□□□□□ -0.42
CDH7-202ENST00000397968 SPAG9O60271 1321 aaKnown RBP12.43□□□□□ -0.42
CDH7-202ENST00000397968 TNNT3P45378 269 aaPredicted RBP12.43□□□□□ -0.42
CDH7-202ENST00000397968 KIF15Q9NS87 1388 aa12.43□□□□□ -0.42
CDH7-202ENST00000397968 CENPQQ7L2Z9 268 aaPredicted RBP12.42□□□□□ -0.42
CDH7-202ENST00000397968 NAP1L2Q9ULW6 460 aaPredicted RBP12.41□□□□□ -0.42
CDH7-202ENST00000397968 LMOD3Q0VAK6 560 aa12.41□□□□□ -0.42
CDH7-202ENST00000397968 SRPK2P78362 688 aaKnown RBP12.41□□□□□ -0.42
CDH7-202ENST00000397968 TSHZ2Q9NRE2 1034 aa12.4□□□□□ -0.42
CDH7-202ENST00000397968 TPRNQ4KMQ1 711 aa12.4□□□□□ -0.42
CDH7-202ENST00000397968 SOGA1O94964 1423 aa12.4□□□□□ -0.42
CDH7-202ENST00000397968 ITPRIPQ8IWB1 547 aa12.39□□□□□ -0.43
CDH7-202ENST00000397968 FANCIQ9NVI1 1328 aa12.39□□□□□ -0.43
CDH7-202ENST00000397968 PLPPR3Q6T4P5 718 aa12.39□□□□□ -0.43
CDH7-202ENST00000397968 GSE1Q14687 1217 aa12.39□□□□□ -0.43
CDH7-202ENST00000397968 AAMPQ13685 434 aa12.39□□□□□ -0.43
CDH7-202ENST00000397968 ZBED9Q6R2W3 1325 aa12.39□□□□□ -0.43
CDH7-202ENST00000397968 A0A0G2JS52 829 aa12.39□□□□□ -0.43
CDH7-202ENST00000397968 HSP90AA2PQ14568 343 aaPredicted RBP12.39□□□□□ -0.43
CDH7-202ENST00000397968 MPHOSPH9Q99550 1183 aa12.39□□□□□ -0.43
CDH7-202ENST00000397968 ERCC6Q03468 1493 aa12.38□□□□□ -0.43
CDH7-202ENST00000397968 TOP2AP11388 1531 aaKnown RBP12.38□□□□□ -0.43
CDH7-202ENST00000397968 UACAQ9BZF9 1416 aa12.38□□□□□ -0.43
CDH7-202ENST00000397968 MYBBP1AQ9BQG0 1328 aaKnown RBP12.37□□□□□ -0.43
CDH7-202ENST00000397968 CENPJQ9HC77 1338 aaPredicted RBP12.37□□□□□ -0.43
CDH7-202ENST00000397968 FAM161AQ3B820 660 aa12.37□□□□□ -0.43
CDH7-202ENST00000397968 NPHP1O15259 732 aa12.37□□□□□ -0.43
CDH7-202ENST00000397968 TERF2IPQ9NYB0 399 aa12.36□□□□□ -0.43
CDH7-202ENST00000397968 PKD2Q13563 968 aa12.36□□□□□ -0.43
CDH7-202ENST00000397968 SLKQ9H2G2 1235 aaPredicted RBP12.36□□□□□ -0.43
CDH7-202ENST00000397968 GPS2Q13227 327 aa12.36□□□□□ -0.43
CDH7-202ENST00000397968 STK31Q9BXU1 1019 aa12.36□□□□□ -0.43
CDH7-202ENST00000397968 NOC3LQ8WTT2 800 aaKnown RBP12.35□□□□□ -0.43
CDH7-202ENST00000397968 SMC4Q9NTJ3 1288 aa12.35□□□□□ -0.43
CDH7-202ENST00000397968 NUP155O75694 1391 aa12.35□□□□□ -0.43
CDH7-202ENST00000397968 CGNL1Q0VF96 1302 aa12.34□□□□□ -0.43
CDH7-202ENST00000397968 GZF1Q9H116 711 aaPredicted RBP12.34□□□□□ -0.43
CDH7-202ENST00000397968 CCDC88BA6NC98 1476 aa12.34□□□□□ -0.43
CDH7-202ENST00000397968 SETQ01105 290 aaPredicted RBP12.34□□□□□ -0.43
CDH7-202ENST00000397968 U2AF1L5P0DN76 240 aaPredicted RBP12.34□□□□□ -0.43
CDH7-202ENST00000397968 U2AF1Q01081 240 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDH7-202ENST00000397968 KIF16BQ96L93 1317 aa12.34□□□□□ -0.43
CDH7-202ENST00000397968 SPRYD3Q8NCJ5 442 aa12.33□□□□□ -0.43
CDH7-202ENST00000397968 ABCC8Q09428 1581 aa12.33□□□□□ -0.44
CDH7-202ENST00000397968 MTERF4Q7Z6M4 381 aaKnown RBP12.32□□□□□ -0.44
CDH7-202ENST00000397968 E9PSI1 815 aa12.31□□□□□ -0.44
CDH7-202ENST00000397968 MFAP1P55081 439 aaKnown RBP12.31□□□□□ -0.44
CDH7-202ENST00000397968 RAPGEF2Q9Y4G8 1499 aa12.31□□□□□ -0.44
CDH7-202ENST00000397968 TPM3P06753 285 aa12.3□□□□□ -0.44
CDH7-202ENST00000397968 PDS5BQ9NTI5 1447 aa12.3□□□□□ -0.44
CDH7-202ENST00000397968 CCDC70Q6NSX1 233 aa12.29□□□□□ -0.44
CDH7-202ENST00000397968 ROCK1Q13464 1354 aa12.29□□□□□ -0.44
CDH7-202ENST00000397968 LRRFIP1Q32MZ4 808 aaKnown RBP12.29□□□□□ -0.44
CDH7-202ENST00000397968 CECR2Q9BXF3 1484 aa12.29□□□□□ -0.44
CDH7-202ENST00000397968 REC8O95072 547 aa12.28□□□□□ -0.44
CDH7-202ENST00000397968 CCDC144AA2RUR9 1427 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms