RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 C14orf37Q86TY3 774 aa6.24□□□□□ -1.41
UBE3A-202ENST00000397954 ABCC10Q5T3U5 1492 aa6.24□□□□□ -1.41
UBE3A-202ENST00000397954 UACAQ9BZF9 1416 aa6.23□□□□□ -1.41
UBE3A-202ENST00000397954 U3KPZ7 1027 aaPredicted RBP6.22□□□□□ -1.41
UBE3A-202ENST00000397954 ABCA9Q8IUA7 1624 aa6.22□□□□□ -1.41
UBE3A-202ENST00000397954 CCDC18Q5T9S5 1454 aa6.22□□□□□ -1.41
UBE3A-202ENST00000397954 SAMD1Q6SPF0 538 aaPredicted RBP6.22□□□□□ -1.41
UBE3A-202ENST00000397954 JPH4Q96JJ6 628 aa6.22□□□□□ -1.41
UBE3A-202ENST00000397954 MAGI3Q5TCQ9 1506 aa6.21□□□□□ -1.42
UBE3A-202ENST00000397954 FMN1Q68DA7 1419 aa6.21□□□□□ -1.42
UBE3A-202ENST00000397954 TRIM41Q8WV44 630 aa6.2□□□□□ -1.42
UBE3A-202ENST00000397954 PTPRGP23470 1445 aa6.2□□□□□ -1.42
UBE3A-202ENST00000397954 ERCC6L2Q5T890 1561 aa6.2□□□□□ -1.42
UBE3A-202ENST00000397954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.2□□□□□ -1.429e-8■■■□□ 14.6
UBE3A-202ENST00000397954 MAP3K1Q13233 1512 aa6.19□□□□□ -1.42
UBE3A-202ENST00000397954 CHGAP10645 457 aaKnown RBP6.19□□□□□ -1.42
UBE3A-202ENST00000397954 PPRC1Q5VV67 1664 aaKnown RBP6.18□□□□□ -1.42
UBE3A-202ENST00000397954 WDR7Q9Y4E6 1490 aa6.18□□□□□ -1.42
UBE3A-202ENST00000397954 KLHL34Q8N239 644 aa6.18□□□□□ -1.42
UBE3A-202ENST00000397954 FYCO1Q9BQS8 1478 aa6.18□□□□□ -1.42
UBE3A-202ENST00000397954 NEO1Q92859 1461 aa6.17□□□□□ -1.42
UBE3A-202ENST00000397954 FAM135AQ9P2D6 1515 aa6.17□□□□□ -1.42
UBE3A-202ENST00000397954 PODXL2Q9NZ53 605 aa6.16□□□□□ -1.42
UBE3A-202ENST00000397954 DCAF8L1A6NGE4 600 aa6.16□□□□□ -1.42
UBE3A-202ENST00000397954 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.16□□□□□ -1.42
UBE3A-202ENST00000397954 HNRNPUL2Q1KMD3 747 aaKnown RBP6.16□□□□□ -1.42
UBE3A-202ENST00000397954 ERICH6Q7L0X2 663 aa6.16□□□□□ -1.42
UBE3A-202ENST00000397954 SPOCK2Q92563 424 aa6.16□□□□□ -1.42
UBE3A-202ENST00000397954 MYO5CQ9NQX4 1742 aa6.16□□□□□ -1.42
UBE3A-202ENST00000397954 EPRSP07814 1512 aaKnown RBP6.16□□□□□ -1.42
UBE3A-202ENST00000397954 ITSN2Q9NZM3 1697 aa6.16□□□□□ -1.42
UBE3A-202ENST00000397954 REREQ9P2R6 1566 aa6.15□□□□□ -1.42
UBE3A-202ENST00000397954 ZMYM4Q5VZL5 1548 aa6.15□□□□□ -1.43
UBE3A-202ENST00000397954 KIF14Q15058 1648 aa6.14□□□□□ -1.43
UBE3A-202ENST00000397954 KDM6BO15054 1643 aa6.13□□□□□ -1.43
UBE3A-202ENST00000397954 CASKIN1Q8WXD9 1431 aa6.13□□□□□ -1.43
UBE3A-202ENST00000397954 MAGI2Q86UL8 1455 aa6.13□□□□□ -1.43
UBE3A-202ENST00000397954 ASXL2Q76L83 1435 aa6.12□□□□□ -1.43
UBE3A-202ENST00000397954 PREX2Q70Z35 1606 aa6.12□□□□□ -1.43
UBE3A-202ENST00000397954 CLIP1P30622 1438 aa6.11□□□□□ -1.43
UBE3A-202ENST00000397954 EHBP1L1Q8N3D4 1523 aa6.11□□□□□ -1.43
UBE3A-202ENST00000397954 BCORL1Q5H9F3 1711 aa6.11□□□□□ -1.43
UBE3A-202ENST00000397954 PLEKHH2Q8IVE3 1493 aa6.11□□□□□ -1.43
UBE3A-202ENST00000397954 NUP153P49790 1475 aaKnown RBP6.1□□□□□ -1.43
UBE3A-202ENST00000397954 ARHGAP35Q9NRY4 1499 aa6.1□□□□□ -1.43
UBE3A-202ENST00000397954 RICTORQ6R327 1708 aa6.09□□□□□ -1.43
UBE3A-202ENST00000397954 LRRIQ1Q96JM4 1722 aa6.08□□□□□ -1.44
UBE3A-202ENST00000397954 ATP10BO94823 1461 aa6.08□□□□□ -1.44
UBE3A-202ENST00000397954 CYB5RLQ6IPT4 315 aa6.08□□□□□ -1.44
UBE3A-202ENST00000397954 SUPT6HQ7KZ85 1726 aaKnown RBP6.08□□□□□ -1.44
UBE3A-202ENST00000397954 ARHGEF40Q8TER5 1519 aa6.08□□□□□ -1.44
UBE3A-202ENST00000397954 PCF11O94913 1555 aaKnown RBP6.07□□□□□ -1.44
UBE3A-202ENST00000397954 CDK11AQ9UQ88 783 aaPredicted RBP6.07□□□□□ -1.44
UBE3A-202ENST00000397954 KDM5CP41229 1560 aa6.07□□□□□ -1.44
UBE3A-202ENST00000397954 TROQ12816 1431 aaPredicted RBP6.07□□□□□ -1.44
UBE3A-202ENST00000397954 MROH2AA6NES4 1674 aa6.06□□□□□ -1.44
UBE3A-202ENST00000397954 FHOD3Q2V2M9 1422 aa6.06□□□□□ -1.44
UBE3A-202ENST00000397954 UBTFP17480 764 aaKnown RBP6.06□□□□□ -1.44
UBE3A-202ENST00000397954 ADGBQ8N7X0 1667 aa6.06□□□□□ -1.44
UBE3A-202ENST00000397954 CDC42BPAQ5VT25 1732 aa6.05□□□□□ -1.44
UBE3A-202ENST00000397954 NKX1-1Q15270 411 aaPredicted RBP6.05□□□□□ -1.44
UBE3A-202ENST00000397954 MAST1Q9Y2H9 1570 aa6.05□□□□□ -1.44
UBE3A-202ENST00000397954 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.05□□□□□ -1.449e-7■□□□□ 9.5
UBE3A-202ENST00000397954 TRHP20396 242 aaPredicted RBP6.05□□□□□ -1.44
UBE3A-202ENST00000397954 ARHGEF5Q12774 1597 aa6.05□□□□□ -1.44
UBE3A-202ENST00000397954 RANGAP1P46060 587 aaPredicted RBP6.04□□□□□ -1.44
UBE3A-202ENST00000397954 AGLP35573 1532 aa6.04□□□□□ -1.44
UBE3A-202ENST00000397954 CIZ1Q9ULV3 898 aaPredicted RBP6.04□□□□□ -1.44
UBE3A-202ENST00000397954 CDC42BPBQ9Y5S2 1711 aa6.04□□□□□ -1.44
UBE3A-202ENST00000397954 EIF2AK4Q9P2K8 1649 aaKnown RBP6.04□□□□□ -1.44
UBE3A-202ENST00000397954 PLCH2O75038 1416 aa6.04□□□□□ -1.44
UBE3A-202ENST00000397954 CEP162Q5TB80 1403 aa6.04□□□□□ -1.44
UBE3A-202ENST00000397954 CD109Q6YHK3 1445 aa6.04□□□□□ -1.44
UBE3A-202ENST00000397954 KIAA1107Q9UPP5 1409 aa6.04□□□□□ -1.44
UBE3A-202ENST00000397954 TSPOAP1O95153 1857 aa6.03□□□□□ -1.44
UBE3A-202ENST00000397954 BRPF1P55201 1214 aaPredicted RBP6.03□□□□□ -1.44
UBE3A-202ENST00000397954 TIAM1Q13009 1591 aa6.03□□□□□ -1.44
UBE3A-202ENST00000397954 FRMPD1Q5SYB0 1578 aa6.03□□□□□ -1.44
UBE3A-202ENST00000397954 HECW2Q9P2P5 1572 aa6.03□□□□□ -1.44
UBE3A-202ENST00000397954 ZC3H13Q5T200 1668 aaKnown RBP6.03□□□□□ -1.44
UBE3A-202ENST00000397954 ABCC1P33527 1531 aa6.03□□□□□ -1.44
UBE3A-202ENST00000397954 TTC37Q6PGP7 1564 aa6.03□□□□□ -1.44
UBE3A-202ENST00000397954 ZNF518AQ6AHZ1 1483 aa6.02□□□□□ -1.45
UBE3A-202ENST00000397954 TRIM26Q12899 539 aaPredicted RBP6.02□□□□□ -1.45
UBE3A-202ENST00000397954 HS6ST3Q8IZP7 471 aa6.02□□□□□ -1.45
UBE3A-202ENST00000397954 PLCD3Q8N3E9 789 aa6.02□□□□□ -1.45
UBE3A-202ENST00000397954 RNF25Q96BH1 459 aaPredicted RBP6.02□□□□□ -1.45
UBE3A-202ENST00000397954 CROCC2H7BZ55 1655 aa6.01□□□□□ -1.45
UBE3A-202ENST00000397954 ADAMTSL3P82987 1691 aa6.01□□□□□ -1.45
UBE3A-202ENST00000397954 VPS8Q8N3P4 1428 aa6.01□□□□□ -1.45
UBE3A-202ENST00000397954 MLH3Q9UHC1 1453 aa6.01□□□□□ -1.45
UBE3A-202ENST00000397954 INO80Q9ULG1 1556 aaPredicted RBP6.01□□□□□ -1.45
UBE3A-202ENST00000397954 FANCAO15360 1455 aa6.01□□□□□ -1.45
UBE3A-202ENST00000397954 PLXNC1O60486 1568 aa6.01□□□□□ -1.45
UBE3A-202ENST00000397954 ACIN1Q9UKV3 1341 aaKnown RBP6□□□□□ -1.45
UBE3A-202ENST00000397954 RTEL1-TNFRSF6BF6WH68 1400 aa6□□□□□ -1.45
UBE3A-202ENST00000397954 DENND4BO75064 1496 aaPredicted RBP6□□□□□ -1.45
UBE3A-202ENST00000397954 ZFYVE16Q7Z3T8 1539 aa6□□□□□ -1.45
UBE3A-202ENST00000397954 MIA2Q96PC5 1412 aa6□□□□□ -1.45
UBE3A-202ENST00000397954 SHANK2Q9UPX8 1470 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms