RNA–Protein interactions for RNA: ENST00000397893.3

SUMO3-202, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-202ENST00000397893 POGZQ7Z3K3 1410 aa11.25□□□□□ -0.61
SUMO3-202ENST00000397893 HECW1Q76N89 1606 aa11.24□□□□□ -0.61
SUMO3-202ENST00000397893 MADDQ8WXG6 1647 aa11.24□□□□□ -0.61
SUMO3-202ENST00000397893 CASKIN1Q8WXD9 1431 aa11.23□□□□□ -0.61
SUMO3-202ENST00000397893 CFAP74Q9C0B2 1584 aa11.23□□□□□ -0.61
SUMO3-202ENST00000397893 ZFYVE16Q7Z3T8 1539 aa11.22□□□□□ -0.61
SUMO3-202ENST00000397893 SIGLEC1Q9BZZ2 1709 aa11.22□□□□□ -0.61
SUMO3-202ENST00000397893 KIF14Q15058 1648 aa11.21□□□□□ -0.61
SUMO3-202ENST00000397893 LMTK3Q96Q04 1460 aa11.21□□□□□ -0.61
SUMO3-202ENST00000397893 AFAP1Q8N556 730 aa11.21□□□□□ -0.61
SUMO3-202ENST00000397893 ATP10AO60312 1499 aa11.2□□□□□ -0.62
SUMO3-202ENST00000397893 PCF11O94913 1555 aaKnown RBP11.19□□□□□ -0.62
SUMO3-202ENST00000397893 CLIP1P30622 1438 aa11.18□□□□□ -0.62
SUMO3-202ENST00000397893 MLECQ14165 292 aa11.17□□□□□ -0.62
SUMO3-202ENST00000397893 ARHGEF12Q9NZN5 1544 aa11.17□□□□□ -0.62
SUMO3-202ENST00000397893 LRRIQ1Q96JM4 1722 aa11.17□□□□□ -0.62
SUMO3-202ENST00000397893 ZNF518AQ6AHZ1 1483 aa11.17□□□□□ -0.62
SUMO3-202ENST00000397893 C9orf84Q5VXU9 1444 aa11.17□□□□□ -0.62
SUMO3-202ENST00000397893 KDM5CP41229 1560 aa11.16□□□□□ -0.62
SUMO3-202ENST00000397893 HSPA2P54652 639 aa11.16□□□□□ -0.62
SUMO3-202ENST00000397893 TRAPPC8Q9Y2L5 1435 aa11.16□□□□□ -0.62
SUMO3-202ENST00000397893 ARHGAP5Q13017 1502 aa11.15□□□□□ -0.62
SUMO3-202ENST00000397893 RIMS1Q86UR5 1692 aaKnown RBP11.15□□□□□ -0.62
SUMO3-202ENST00000397893 CCDC18Q5T9S5 1454 aa11.15□□□□□ -0.62
SUMO3-202ENST00000397893 MLH3Q9UHC1 1453 aa11.15□□□□□ -0.62
SUMO3-202ENST00000397893 MYO5CQ9NQX4 1742 aa11.15□□□□□ -0.63
SUMO3-202ENST00000397893 FYCO1Q9BQS8 1478 aa11.13□□□□□ -0.63
SUMO3-202ENST00000397893 CEBPAP49715 358 aaPredicted RBP11.13□□□□□ -0.63
SUMO3-202ENST00000397893 FBXO41Q8TF61 875 aa11.12□□□□□ -0.63
SUMO3-202ENST00000397893 ABCC1P33527 1531 aa11.12□□□□□ -0.63
SUMO3-202ENST00000397893 GPATCH8Q9UKJ3 1502 aaKnown RBP11.12□□□□□ -0.63
SUMO3-202ENST00000397893 CDC42BPBQ9Y5S2 1711 aa11.12□□□□□ -0.63
SUMO3-202ENST00000397893 REREQ9P2R6 1566 aa11.11□□□□□ -0.63
SUMO3-202ENST00000397893 DIP2CQ9Y2E4 1556 aa11.11□□□□□ -0.63
SUMO3-202ENST00000397893 AGLP35573 1532 aa11.1□□□□□ -0.63
SUMO3-202ENST00000397893 PREX2Q70Z35 1606 aa11.09□□□□□ -0.63
SUMO3-202ENST00000397893 ABCA6Q8N139 1617 aa11.08□□□□□ -0.64
SUMO3-202ENST00000397893 HNRNPMP52272 730 aaKnown RBP eCLIP11.07□□□□□ -0.64
SUMO3-202ENST00000397893 KIAA1107Q9UPP5 1409 aa11.07□□□□□ -0.64
SUMO3-202ENST00000397893 FER1L4A9Z1Z3 1794 aa11.06□□□□□ -0.64
SUMO3-202ENST00000397893 MYT1LQ9UL68 1186 aa11.06□□□□□ -0.64
SUMO3-202ENST00000397893 ZNF777Q9ULD5 760 aaPredicted RBP11.06□□□□□ -0.64
SUMO3-202ENST00000397893 KIDINS220Q9ULH0 1771 aa11.05□□□□□ -0.64
SUMO3-202ENST00000397893 CDC42BPAQ5VT25 1732 aa11.05□□□□□ -0.64
SUMO3-202ENST00000397893 SAMD9LQ8IVG5 1584 aa11.05□□□□□ -0.64
SUMO3-202ENST00000397893 ITSN2Q9NZM3 1697 aa11.04□□□□□ -0.64
SUMO3-202ENST00000397893 CFDP1Q9UEE9 299 aaPredicted RBP11.04□□□□□ -0.64
SUMO3-202ENST00000397893 SPAG9O60271 1321 aaKnown RBP11.04□□□□□ -0.64
SUMO3-202ENST00000397893 ZNF644Q9H582 1327 aaPredicted RBP11.04□□□□□ -0.64
SUMO3-202ENST00000397893 CCNB3Q8WWL7 1395 aa11.03□□□□□ -0.64
SUMO3-202ENST00000397893 SYCP2Q9BX26 1530 aa11.03□□□□□ -0.64
SUMO3-202ENST00000397893 PLEKHH2Q8IVE3 1493 aa11.02□□□□□ -0.65
SUMO3-202ENST00000397893 MBD5Q9P267 1494 aa11.02□□□□□ -0.65
SUMO3-202ENST00000397893 CERKQ8TCT0 537 aa11.02□□□□□ -0.65
SUMO3-202ENST00000397893 MTUS2Q5JR59 1369 aa11.02□□□□□ -0.65
SUMO3-202ENST00000397893 CEP162Q5TB80 1403 aa11.01□□□□□ -0.65
SUMO3-202ENST00000397893 UHRF1BP1Q6BDS2 1440 aa11.01□□□□□ -0.65
SUMO3-202ENST00000397893 SETD1BQ9UPS6 1966 aaKnown RBP11.01□□□□□ -0.65
SUMO3-202ENST00000397893 CNTLNQ9NXG0 1405 aa11.01□□□□□ -0.65
SUMO3-202ENST00000397893 PREX1Q8TCU6 1659 aa10.99□□□□□ -0.65
SUMO3-202ENST00000397893 ZMYM3Q14202 1370 aa10.99□□□□□ -0.65
SUMO3-202ENST00000397893 A2MP01023 1474 aa10.99□□□□□ -0.65
SUMO3-202ENST00000397893 ATP7AQ04656 1500 aa10.99□□□□□ -0.65
SUMO3-202ENST00000397893 ESF1Q9H501 851 aaKnown RBP10.98□□□□□ -0.65
SUMO3-202ENST00000397893 DMRT2Q9Y5R5 561 aa10.98□□□□□ -0.65
SUMO3-202ENST00000397893 NPATQ14207 1427 aa10.98□□□□□ -0.65
SUMO3-202ENST00000397893 PLXNC1O60486 1568 aa10.98□□□□□ -0.65
SUMO3-202ENST00000397893 TIAM1Q13009 1591 aa10.98□□□□□ -0.65
SUMO3-202ENST00000397893 INO80Q9ULG1 1556 aaPredicted RBP10.98□□□□□ -0.65
SUMO3-202ENST00000397893 C3P01024 1663 aa10.98□□□□□ -0.65
SUMO3-202ENST00000397893 PTPRTO14522 1441 aa10.97□□□□□ -0.65
SUMO3-202ENST00000397893 EHBP1L1Q8N3D4 1523 aa10.97□□□□□ -0.65
SUMO3-202ENST00000397893 STRCQ7RTU9 1775 aa10.97□□□□□ -0.65
SUMO3-202ENST00000397893 RTEL1-TNFRSF6BF6WH68 1400 aa10.96□□□□□ -0.65
SUMO3-202ENST00000397893 LOC105371045A0A1W2PR82 267 aa10.96□□□□□ -0.65
SUMO3-202ENST00000397893 PPP6R1Q9UPN7 881 aa10.96□□□□□ -0.65
SUMO3-202ENST00000397893 PTPRKQ15262 1439 aa10.95□□□□□ -0.66
SUMO3-202ENST00000397893 NCOA1Q15788 1441 aa10.95□□□□□ -0.66
SUMO3-202ENST00000397893 DHX29Q7Z478 1369 aaKnown RBP10.95□□□□□ -0.66
SUMO3-202ENST00000397893 NCOA2Q15596 1464 aa10.94□□□□□ -0.66
SUMO3-202ENST00000397893 GGT6Q6P531 493 aa10.94□□□□□ -0.66
SUMO3-202ENST00000397893 RSPH4AQ5TD94 716 aa10.92□□□□□ -0.66
SUMO3-202ENST00000397893 MROH2AA6NES4 1674 aa10.92□□□□□ -0.66
SUMO3-202ENST00000397893 LTBP4Q8N2S1 1624 aa10.91□□□□□ -0.66
SUMO3-202ENST00000397893 KANK4Q5T7N3 995 aaPredicted RBP10.91□□□□□ -0.66
SUMO3-202ENST00000397893 VPS8Q8N3P4 1428 aa10.91□□□□□ -0.66
SUMO3-202ENST00000397893 SUPT6HQ7KZ85 1726 aaKnown RBP10.9□□□□□ -0.66
SUMO3-202ENST00000397893 CAMSAP2Q08AD1 1489 aa10.9□□□□□ -0.66
SUMO3-202ENST00000397893 CCDC141Q6ZP82 1450 aa10.9□□□□□ -0.66
SUMO3-202ENST00000397893 NCKAP5LQ9HCH0 1330 aa10.89□□□□□ -0.67
SUMO3-202ENST00000397893 LRRC9Q6ZRR7 1453 aa10.89□□□□□ -0.67
SUMO3-202ENST00000397893 FBXO31Q5XUX0 539 aaPredicted RBP10.89□□□□□ -0.67
SUMO3-202ENST00000397893 PLA2R1Q13018 1463 aa10.88□□□□□ -0.67
SUMO3-202ENST00000397893 TCOF1Q13428 1488 aaKnown RBP10.88□□□□□ -0.67
SUMO3-202ENST00000397893 CAMSAP1Q5T5Y3 1602 aa10.88□□□□□ -0.67
SUMO3-202ENST00000397893 KIF3BO15066 747 aa10.88□□□□□ -0.67
SUMO3-202ENST00000397893 PKD2Q13563 968 aa10.87□□□□□ -0.67
SUMO3-202ENST00000397893 CLTCQ00610 1675 aaKnown RBP10.87□□□□□ -0.67
SUMO3-202ENST00000397893 ADGBQ8N7X0 1667 aa10.87□□□□□ -0.67
SUMO3-202ENST00000397893 MAP3K1Q13233 1512 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms