RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 CAMSAP2Q08AD1 1489 aa28.92■■■□□ 2.22
PDLIM2-204ENST00000397760 PREX2Q70Z35 1606 aa28.92■■■□□ 2.22
PDLIM2-204ENST00000397760 PLCH2O75038 1416 aa28.91■■■□□ 2.22
PDLIM2-204ENST00000397760 ARHGAP5Q13017 1502 aa28.88■■■□□ 2.21
PDLIM2-204ENST00000397760 PTPRKQ15262 1439 aa28.88■■■□□ 2.21
PDLIM2-204ENST00000397760 CDC42BPBQ9Y5S2 1711 aa28.88■■■□□ 2.21
PDLIM2-204ENST00000397760 MYO5CQ9NQX4 1742 aa28.87■■■□□ 2.21
PDLIM2-204ENST00000397760 ABCA9Q8IUA7 1624 aa28.87■■■□□ 2.21
PDLIM2-204ENST00000397760 EFCAB2Q5VUJ9 269 aa28.85■■■□□ 2.21
PDLIM2-204ENST00000397760 DAPK1P53355 1430 aa28.82■■■□□ 2.2
PDLIM2-204ENST00000397760 ABCC5O15440 1437 aa28.82■■■□□ 2.2
PDLIM2-204ENST00000397760 DNAJC5Q9H3Z4 198 aa28.81■■■□□ 2.2
PDLIM2-204ENST00000397760 CHIC2Q9UKJ5 165 aa28.8■■■□□ 2.2
PDLIM2-204ENST00000397760 SAMD9LQ8IVG5 1584 aa28.8■■■□□ 2.2
PDLIM2-204ENST00000397760 ARAP3Q8WWN8 1544 aa28.8■■■□□ 2.2
PDLIM2-204ENST00000397760 HNRNPMP52272 730 aaKnown RBP eCLIP28.79■■■□□ 2.2
PDLIM2-204ENST00000397760 DNMT1P26358 1616 aaKnown RBP28.79■■■□□ 2.2
PDLIM2-204ENST00000397760 CD109Q6YHK3 1445 aa28.77■■■□□ 2.2
PDLIM2-204ENST00000397760 SETD5Q9C0A6 1442 aa28.75■■■□□ 2.19
PDLIM2-204ENST00000397760 PLEKHH2Q8IVE3 1493 aa28.75■■■□□ 2.19
PDLIM2-204ENST00000397760 MBD5Q9P267 1494 aa28.74■■■□□ 2.19
PDLIM2-204ENST00000397760 KIAA1107Q9UPP5 1409 aa28.73■■■□□ 2.19
PDLIM2-204ENST00000397760 RSPH4AQ5TD94 716 aa28.73■■■□□ 2.19
PDLIM2-204ENST00000397760 FANCAO15360 1455 aa28.72■■■□□ 2.19
PDLIM2-204ENST00000397760 FAM69CQ0P6D2 419 aa28.7■■■□□ 2.18
PDLIM2-204ENST00000397760 RRP7BPQ9NSQ0 103 aa28.7■■■□□ 2.18
PDLIM2-204ENST00000397760 HFM1A2PYH4 1435 aa28.7■■■□□ 2.18
PDLIM2-204ENST00000397760 AKNAQ7Z591 1439 aa28.7■■■□□ 2.18
PDLIM2-204ENST00000397760 SYCP2Q9BX26 1530 aa28.7■■■□□ 2.18
PDLIM2-204ENST00000397760 RAB3GAP2Q9H2M9 1393 aa28.69■■■□□ 2.18
PDLIM2-204ENST00000397760 ARHGEF5Q12774 1597 aa28.69■■■□□ 2.18
PDLIM2-204ENST00000397760 TSPY4P0CV99 314 aa28.69■■■□□ 2.18
PDLIM2-204ENST00000397760 TSPY10P0CW01 314 aa28.69■■■□□ 2.18
PDLIM2-204ENST00000397760 GLI2P10070 1586 aa28.69■■■□□ 2.18
PDLIM2-204ENST00000397760 ROCK1Q13464 1354 aa28.67■■■□□ 2.18
PDLIM2-204ENST00000397760 CCDC141Q6ZP82 1450 aa28.67■■■□□ 2.18
PDLIM2-204ENST00000397760 NAIPQ13075 1403 aa28.66■■■□□ 2.18
PDLIM2-204ENST00000397760 ARHGEF12Q9NZN5 1544 aa28.66■■■□□ 2.18
PDLIM2-204ENST00000397760 ABCC1P33527 1531 aa28.65■■■□□ 2.18
PDLIM2-204ENST00000397760 DIP2BQ9P265 1576 aa28.65■■■□□ 2.18
PDLIM2-204ENST00000397760 SHANK2Q9UPX8 1470 aa28.64■■■□□ 2.17
PDLIM2-204ENST00000397760 CCER1Q8TC90 406 aaPredicted RBP28.63■■■□□ 2.17
PDLIM2-204ENST00000397760 C9orf84Q5VXU9 1444 aa28.62■■■□□ 2.17
PDLIM2-204ENST00000397760 CROCC2H7BZ55 1655 aa28.62■■■□□ 2.17
PDLIM2-204ENST00000397760 NCOA1Q15788 1441 aa28.6■■■□□ 2.17
PDLIM2-204ENST00000397760 MAP3K4Q9Y6R4 1608 aa28.6■■■□□ 2.17
PDLIM2-204ENST00000397760 ANKRD30AQ9BXX3 1397 aa28.59■■■□□ 2.17
PDLIM2-204ENST00000397760 ADGRL2O95490 1459 aa28.59■■■□□ 2.17
PDLIM2-204ENST00000397760 ADGRL1O94910 1474 aa28.59■■■□□ 2.17
PDLIM2-204ENST00000397760 TRAPPC8Q9Y2L5 1435 aa28.59■■■□□ 2.17
PDLIM2-204ENST00000397760 SCAPERQ9BY12 1400 aa28.58■■■□□ 2.17
PDLIM2-204ENST00000397760 CFAP74Q9C0B2 1584 aa28.55■■■□□ 2.16
PDLIM2-204ENST00000397760 AFAP1Q8N556 730 aa28.54■■■□□ 2.16
PDLIM2-204ENST00000397760 NEO1Q92859 1461 aa28.53■■■□□ 2.16
PDLIM2-204ENST00000397760 ADGBQ8N7X0 1667 aa28.53■■■□□ 2.16
PDLIM2-204ENST00000397760 GCC2Q8IWJ2 1684 aa28.51■■■□□ 2.16
PDLIM2-204ENST00000397760 MAST1Q9Y2H9 1570 aa28.5■■■□□ 2.15
PDLIM2-204ENST00000397760 DHX57Q6P158 1386 aaKnown RBP28.48■■■□□ 2.15
PDLIM2-204ENST00000397760 SPAG9O60271 1321 aaKnown RBP28.48■■■□□ 2.15
PDLIM2-204ENST00000397760 KIF15Q9NS87 1388 aa28.47■■■□□ 2.15
PDLIM2-204ENST00000397760 KDM6BO15054 1643 aa28.44■■■□□ 2.14
PDLIM2-204ENST00000397760 KIF13AQ9H1H9 1805 aa28.43■■■□□ 2.14
PDLIM2-204ENST00000397760 RTEL1-TNFRSF6BF6WH68 1400 aa28.43■■■□□ 2.14
PDLIM2-204ENST00000397760 ZNF518AQ6AHZ1 1483 aa28.42■■■□□ 2.14
PDLIM2-204ENST00000397760 ANKRD50Q9ULJ7 1429 aa28.42■■■□□ 2.14
PDLIM2-204ENST00000397760 TEX14Q8IWB6 1497 aa28.41■■■□□ 2.14
PDLIM2-204ENST00000397760 POGZQ7Z3K3 1410 aa28.4■■■□□ 2.14
PDLIM2-204ENST00000397760 DENND4BO75064 1496 aaPredicted RBP28.4■■■□□ 2.14
PDLIM2-204ENST00000397760 TRIM52Q96A61 297 aa28.39■■■□□ 2.14
PDLIM2-204ENST00000397760 ACIN1Q9UKV3 1341 aaKnown RBP28.39■■■□□ 2.14
PDLIM2-204ENST00000397760 MYT1LQ9UL68 1186 aa28.39■■■□□ 2.13
PDLIM2-204ENST00000397760 TSPOAP1O95153 1857 aa28.38■■■□□ 2.13
PDLIM2-204ENST00000397760 PPRC1Q5VV67 1664 aaKnown RBP28.38■■■□□ 2.13
PDLIM2-204ENST00000397760 PLXNC1O60486 1568 aa28.37■■■□□ 2.13
PDLIM2-204ENST00000397760 RAPGEF3O95398 923 aa28.36■■■□□ 2.13
PDLIM2-204ENST00000397760 ZFYVE16Q7Z3T8 1539 aa28.36■■■□□ 2.13
PDLIM2-204ENST00000397760 ATP7AQ04656 1500 aa28.33■■■□□ 2.13
PDLIM2-204ENST00000397760 INO80Q9ULG1 1556 aaPredicted RBP28.32■■■□□ 2.12
PDLIM2-204ENST00000397760 KDM5CP41229 1560 aa28.32■■■□□ 2.12
PDLIM2-204ENST00000397760 CLSPNQ9HAW4 1339 aa28.32■■■□□ 2.12
PDLIM2-204ENST00000397760 TRHP20396 242 aaPredicted RBP28.32■■■□□ 2.12
PDLIM2-204ENST00000397760 DUOX2Q9NRD8 1548 aa28.31■■■□□ 2.12
PDLIM2-204ENST00000397760 MLH3Q9UHC1 1453 aa28.28■■■□□ 2.12
PDLIM2-204ENST00000397760 ERBINQ96RT1 1412 aa28.25■■■□□ 2.11
PDLIM2-204ENST00000397760 MPHOSPH9Q99550 1183 aa28.24■■■□□ 2.11
PDLIM2-204ENST00000397760 KIDINS220Q9ULH0 1771 aa28.24■■■□□ 2.11
PDLIM2-204ENST00000397760 RICTORQ6R327 1708 aa28.23■■■□□ 2.11
PDLIM2-204ENST00000397760 HECW2Q9P2P5 1572 aa28.23■■■□□ 2.11
PDLIM2-204ENST00000397760 DHX29Q7Z478 1369 aaKnown RBP28.21■■■□□ 2.11
PDLIM2-204ENST00000397760 NUP155O75694 1391 aa28.2■■■□□ 2.1
PDLIM2-204ENST00000397760 FRMPD1Q5SYB0 1578 aa28.19■■■□□ 2.1
PDLIM2-204ENST00000397760 SLC4A1APQ9BWU0 796 aaKnown RBP28.19■■■□□ 2.1
PDLIM2-204ENST00000397760 PZPP20742 1482 aa28.16■■■□□ 2.1
PDLIM2-204ENST00000397760 COL17A1Q9UMD9 1497 aaPredicted RBP28.15■■■□□ 2.1
PDLIM2-204ENST00000397760 A2MP01023 1474 aa28.14■■■□□ 2.1
PDLIM2-204ENST00000397760 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.14■■■□□ 2.1
PDLIM2-204ENST00000397760 ZMYM4Q5VZL5 1548 aa28.13■■■□□ 2.09
PDLIM2-204ENST00000397760 KDM5DQ9BY66 1539 aa28.12■■■□□ 2.09
PDLIM2-204ENST00000397760 KIF3BO15066 747 aa28.11■■■□□ 2.09
PDLIM2-204ENST00000397760 YEATS2Q9ULM3 1422 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms