RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 CCDC18Q5T9S5 1454 aa13.8□□□□□ -0.2
APTX-207ENST00000397172 ATP1B4Q9UN42 357 aaPredicted RBP13.79□□□□□ -0.2
APTX-207ENST00000397172 WDR7Q9Y4E6 1490 aa13.77□□□□□ -0.2
APTX-207ENST00000397172 ARID3CA6NKF2 412 aa13.77□□□□□ -0.21
APTX-207ENST00000397172 ABCC10Q5T3U5 1492 aa13.77□□□□□ -0.21
APTX-207ENST00000397172 PLEKHD1A6NEE1 506 aa13.76□□□□□ -0.21
APTX-207ENST00000397172 CCER2I3L3R5 266 aa13.76□□□□□ -0.21
APTX-207ENST00000397172 CDK13Q14004 1512 aaKnown RBP13.75□□□□□ -0.21
APTX-207ENST00000397172 DHX57Q6P158 1386 aaKnown RBP13.74□□□□□ -0.21
APTX-207ENST00000397172 PPP4R3CPQ6ZMV5 832 aa13.73□□□□□ -0.21
APTX-207ENST00000397172 LRRIQ1Q96JM4 1722 aa13.73□□□□□ -0.21
APTX-207ENST00000397172 GLI2P10070 1586 aa13.73□□□□□ -0.21
APTX-207ENST00000397172 DIP2BQ9P265 1576 aa13.73□□□□□ -0.21
APTX-207ENST00000397172 TRHP20396 242 aaPredicted RBP13.72□□□□□ -0.21
APTX-207ENST00000397172 FAM69CQ0P6D2 419 aa13.72□□□□□ -0.21
APTX-207ENST00000397172 MAP3K1Q13233 1512 aa13.71□□□□□ -0.21
APTX-207ENST00000397172 TROQ12816 1431 aaPredicted RBP13.7□□□□□ -0.22
APTX-207ENST00000397172 RTL5Q5HYW3 569 aaPredicted RBP13.7□□□□□ -0.22
APTX-207ENST00000397172 UBE2Q2Q8WVN8 375 aa13.69□□□□□ -0.22
APTX-207ENST00000397172 KCNH8Q96L42 1107 aa13.69□□□□□ -0.22
APTX-207ENST00000397172 KIF13AQ9H1H9 1805 aa13.68□□□□□ -0.22
APTX-207ENST00000397172 CACNB1Q02641 598 aaPredicted RBP13.68□□□□□ -0.22
APTX-207ENST00000397172 TIAM1Q13009 1591 aa13.67□□□□□ -0.22
APTX-207ENST00000397172 CFAP43Q8NDM7 1665 aa13.66□□□□□ -0.22
APTX-207ENST00000397172 MTUS2Q5JR59 1369 aa13.65□□□□□ -0.22
APTX-207ENST00000397172 MAGI3Q5TCQ9 1506 aa13.65□□□□□ -0.22
APTX-207ENST00000397172 ABCA9Q8IUA7 1624 aa13.65□□□□□ -0.22
APTX-207ENST00000397172 ANP32CO43423 234 aa13.64□□□□□ -0.23
APTX-207ENST00000397172 ANO8Q9HCE9 1232 aaPredicted RBP13.64□□□□□ -0.23
APTX-207ENST00000397172 NOP58Q9Y2X3 529 aaKnown RBP13.64□□□□□ -0.23
APTX-207ENST00000397172 MAP3K4Q9Y6R4 1608 aa13.64□□□□□ -0.23
APTX-207ENST00000397172 EHBP1L1Q8N3D4 1523 aa13.64□□□□□ -0.23
APTX-207ENST00000397172 KIF14Q15058 1648 aa13.63□□□□□ -0.23
APTX-207ENST00000397172 CD109Q6YHK3 1445 aa13.63□□□□□ -0.23
APTX-207ENST00000397172 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.63□□□□□ -0.23
APTX-207ENST00000397172 ITGAEP38570 1179 aa13.62□□□□□ -0.23
APTX-207ENST00000397172 LRRC9Q6ZRR7 1453 aa13.62□□□□□ -0.23
APTX-207ENST00000397172 SLC24A1O60721 1099 aa13.6□□□□□ -0.23
APTX-207ENST00000397172 PPP4R2Q9NY27 417 aa13.6□□□□□ -0.23
APTX-207ENST00000397172 TIMELESSQ9UNS1 1208 aa13.6□□□□□ -0.23
APTX-207ENST00000397172 TEX14Q8IWB6 1497 aa13.6□□□□□ -0.23
APTX-207ENST00000397172 TTC37Q6PGP7 1564 aa13.58□□□□□ -0.24
APTX-207ENST00000397172 KANK4Q5T7N3 995 aaPredicted RBP13.58□□□□□ -0.24
APTX-207ENST00000397172 PLCH2O75038 1416 aa13.58□□□□□ -0.24
APTX-207ENST00000397172 ARAP3Q8WWN8 1544 aa13.58□□□□□ -0.24
APTX-207ENST00000397172 PHLDB1Q86UU1 1377 aa13.57□□□□□ -0.24
APTX-207ENST00000397172 SUPT6HQ7KZ85 1726 aaKnown RBP13.57□□□□□ -0.24
APTX-207ENST00000397172 PPRC1Q5VV67 1664 aaKnown RBP13.56□□□□□ -0.24
APTX-207ENST00000397172 TSPOAP1O95153 1857 aa13.55□□□□□ -0.24
APTX-207ENST00000397172 NCOA2Q15596 1464 aa13.54□□□□□ -0.24
APTX-207ENST00000397172 NEO1Q92859 1461 aa13.54□□□□□ -0.24
APTX-207ENST00000397172 CCNB3Q8WWL7 1395 aa13.54□□□□□ -0.24
APTX-207ENST00000397172 ANP32AP39687 249 aaKnown RBP13.54□□□□□ -0.24
APTX-207ENST00000397172 MYO5CQ9NQX4 1742 aa13.54□□□□□ -0.24
APTX-207ENST00000397172 GPATCH8Q9UKJ3 1502 aaKnown RBP13.53□□□□□ -0.24
APTX-207ENST00000397172 EFCAB2Q5VUJ9 269 aa13.53□□□□□ -0.24
APTX-207ENST00000397172 CFAP74Q9C0B2 1584 aa13.52□□□□□ -0.24
APTX-207ENST00000397172 FANCAO15360 1455 aa13.52□□□□□ -0.25
APTX-207ENST00000397172 USP35Q9P2H5 1018 aa13.52□□□□□ -0.25
APTX-207ENST00000397172 SALL2Q9Y467 1007 aaPredicted RBP13.52□□□□□ -0.25
APTX-207ENST00000397172 PREX2Q70Z35 1606 aa13.51□□□□□ -0.25
APTX-207ENST00000397172 CDC42BPAQ5VT25 1732 aa13.5□□□□□ -0.25
APTX-207ENST00000397172 RRBP1Q9P2E9 1410 aaKnown RBP13.5□□□□□ -0.25
APTX-207ENST00000397172 DDX10Q13206 875 aaKnown RBP13.5□□□□□ -0.25
APTX-207ENST00000397172 PPP1R15AO75807 674 aaPredicted RBP13.5□□□□□ -0.25
APTX-207ENST00000397172 TRIM52Q96A61 297 aa13.5□□□□□ -0.25
APTX-207ENST00000397172 ARHGAP5Q13017 1502 aa13.5□□□□□ -0.25
APTX-207ENST00000397172 CDC42BPBQ9Y5S2 1711 aa13.49□□□□□ -0.25
APTX-207ENST00000397172 ITSN2Q9NZM3 1697 aa13.49□□□□□ -0.25
APTX-207ENST00000397172 AKNAQ7Z591 1439 aa13.49□□□□□ -0.25
APTX-207ENST00000397172 DCAF8L1A6NGE4 600 aa13.49□□□□□ -0.25
APTX-207ENST00000397172 CFDP1Q9UEE9 299 aaPredicted RBP13.49□□□□□ -0.25
APTX-207ENST00000397172 NBR1Q14596 966 aa13.48□□□□□ -0.25
APTX-207ENST00000397172 ZBTB47Q9UFB7 747 aaPredicted RBP13.47□□□□□ -0.25
APTX-207ENST00000397172 MYOM3Q5VTT5 1437 aa13.47□□□□□ -0.25
APTX-207ENST00000397172 MIA2Q96PC5 1412 aa13.47□□□□□ -0.25
APTX-207ENST00000397172 HOXD11P31277 338 aaPredicted RBP13.46□□□□□ -0.25
APTX-207ENST00000397172 IPO9Q96P70 1041 aaKnown RBP13.46□□□□□ -0.25
APTX-207ENST00000397172 PLEKHH2Q8IVE3 1493 aa13.46□□□□□ -0.26
APTX-207ENST00000397172 ADGRL1O94910 1474 aa13.45□□□□□ -0.26
APTX-207ENST00000397172 KDM6BO15054 1643 aa13.45□□□□□ -0.26
APTX-207ENST00000397172 KIAA1107Q9UPP5 1409 aa13.44□□□□□ -0.26
APTX-207ENST00000397172 DENND4BO75064 1496 aaPredicted RBP13.44□□□□□ -0.26
APTX-207ENST00000397172 COL17A1Q9UMD9 1497 aaPredicted RBP13.44□□□□□ -0.26
APTX-207ENST00000397172 SCAPERQ9BY12 1400 aa13.43□□□□□ -0.26
APTX-207ENST00000397172 C11orf95C9JLR9 678 aaPredicted RBP13.43□□□□□ -0.26
APTX-207ENST00000397172 GLIPR1L2Q4G1C9 344 aa13.43□□□□□ -0.26
APTX-207ENST00000397172 ZNF777Q9ULD5 760 aaPredicted RBP13.42□□□□□ -0.26
APTX-207ENST00000397172 ABCC1P33527 1531 aa13.42□□□□□ -0.26
APTX-207ENST00000397172 SAMD9LQ8IVG5 1584 aa13.42□□□□□ -0.26
APTX-207ENST00000397172 CCDC136Q96JN2 1154 aa13.42□□□□□ -0.26
APTX-207ENST00000397172 RSPH4AQ5TD94 716 aa13.41□□□□□ -0.26
APTX-207ENST00000397172 CNKSR2Q8WXI2 1034 aa13.41□□□□□ -0.26
APTX-207ENST00000397172 RNF39Q9H2S5 420 aa13.41□□□□□ -0.26
APTX-207ENST00000397172 FGD6Q6ZV73 1430 aa13.41□□□□□ -0.26
APTX-207ENST00000397172 POGZQ7Z3K3 1410 aa13.4□□□□□ -0.26
APTX-207ENST00000397172 HNRNPUQ00839 825 aaKnown RBP eCLIP13.39□□□□□ -0.27
APTX-207ENST00000397172 CAMSAP2Q08AD1 1489 aa13.39□□□□□ -0.27
APTX-207ENST00000397172 ZNF518AQ6AHZ1 1483 aa13.39□□□□□ -0.27
APTX-207ENST00000397172 RAPGEF3O95398 923 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms