RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 CFAP74Q9C0B2 1584 aa15.31■□□□□ 0.04
MCF2L-206ENST00000397021 AFAP1Q8N556 730 aa15.3■□□□□ 0.04
MCF2L-206ENST00000397021 MYO5CQ9NQX4 1742 aa15.3■□□□□ 0.04
MCF2L-206ENST00000397021 GPATCH8Q9UKJ3 1502 aaKnown RBP15.29■□□□□ 0.04
MCF2L-206ENST00000397021 CCNB3Q8WWL7 1395 aa15.29■□□□□ 0.04
MCF2L-206ENST00000397021 KANK4Q5T7N3 995 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-206ENST00000397021 POGZQ7Z3K3 1410 aa15.28■□□□□ 0.04
MCF2L-206ENST00000397021 CFDP1Q9UEE9 299 aaPredicted RBP15.28■□□□□ 0.04
MCF2L-206ENST00000397021 EHBP1L1Q8N3D4 1523 aa15.27■□□□□ 0.04
MCF2L-206ENST00000397021 YEATS2Q9ULM3 1422 aa15.26■□□□□ 0.03
MCF2L-206ENST00000397021 MYT1LQ9UL68 1186 aa15.26■□□□□ 0.03
MCF2L-206ENST00000397021 TIAM1Q13009 1591 aa15.26■□□□□ 0.03
MCF2L-206ENST00000397021 PREX2Q70Z35 1606 aa15.25■□□□□ 0.03
MCF2L-206ENST00000397021 ARID4BQ4LE39 1312 aaPredicted RBP15.25■□□□□ 0.03
MCF2L-206ENST00000397021 ARHGEF12Q9NZN5 1544 aa15.25■□□□□ 0.03
MCF2L-206ENST00000397021 CDC42BPBQ9Y5S2 1711 aa15.25■□□□□ 0.03
MCF2L-206ENST00000397021 TRAPPC8Q9Y2L5 1435 aa15.25■□□□□ 0.03
MCF2L-206ENST00000397021 ZNF644Q9H582 1327 aaPredicted RBP15.24■□□□□ 0.03
MCF2L-206ENST00000397021 RICTORQ6R327 1708 aa15.24■□□□□ 0.03
MCF2L-206ENST00000397021 HNRNPMP52272 730 aaKnown RBP eCLIP15.24■□□□□ 0.03
MCF2L-206ENST00000397021 NCOA2Q15596 1464 aa15.23■□□□□ 0.03
MCF2L-206ENST00000397021 LRRC9Q6ZRR7 1453 aa15.23■□□□□ 0.03
MCF2L-206ENST00000397021 APLP2Q06481 763 aa15.23■□□□□ 0.03
MCF2L-206ENST00000397021 CDC42BPAQ5VT25 1732 aa15.22■□□□□ 0.03
MCF2L-206ENST00000397021 ABCC1P33527 1531 aa15.22■□□□□ 0.03
MCF2L-206ENST00000397021 ZMYM4Q5VZL5 1548 aa15.22■□□□□ 0.03
MCF2L-206ENST00000397021 ZFYVE16Q7Z3T8 1539 aa15.22■□□□□ 0.03
MCF2L-206ENST00000397021 ZNF518AQ6AHZ1 1483 aa15.21■□□□□ 0.03
MCF2L-206ENST00000397021 SAMD9LQ8IVG5 1584 aa15.2■□□□□ 0.02
MCF2L-206ENST00000397021 ARHGEF40Q8TER5 1519 aa15.2■□□□□ 0.02
MCF2L-206ENST00000397021 MLECQ14165 292 aa15.19■□□□□ 0.02
MCF2L-206ENST00000397021 MAGI2Q86UL8 1455 aa15.19■□□□□ 0.02
MCF2L-206ENST00000397021 SYCP2Q9BX26 1530 aa15.18■□□□□ 0.02
MCF2L-206ENST00000397021 MAP3K1Q13233 1512 aa15.17■□□□□ 0.02
MCF2L-206ENST00000397021 KDM5CP41229 1560 aa15.15■□□□□ 0.02
MCF2L-206ENST00000397021 ATP10AO60312 1499 aa15.15■□□□□ 0.02
MCF2L-206ENST00000397021 SUPT6HQ7KZ85 1726 aaKnown RBP15.15■□□□□ 0.02
MCF2L-206ENST00000397021 KIAA1107Q9UPP5 1409 aa15.15■□□□□ 0.02
MCF2L-206ENST00000397021 ITSN2Q9NZM3 1697 aa15.15■□□□□ 0.02
MCF2L-206ENST00000397021 SPAG9O60271 1321 aaKnown RBP15.15■□□□□ 0.02
MCF2L-206ENST00000397021 PLEKHH2Q8IVE3 1493 aa15.14■□□□□ 0.01
MCF2L-206ENST00000397021 MLH3Q9UHC1 1453 aa15.14■□□□□ 0.01
MCF2L-206ENST00000397021 C9orf84Q5VXU9 1444 aa15.13■□□□□ 0.01
MCF2L-206ENST00000397021 HECW2Q9P2P5 1572 aa15.12■□□□□ 0.01
MCF2L-206ENST00000397021 PLPPR3Q6T4P5 718 aa15.12■□□□□ 0.01
MCF2L-206ENST00000397021 SIGLEC1Q9BZZ2 1709 aa15.12■□□□□ 0.01
MCF2L-206ENST00000397021 MBD5Q9P267 1494 aa15.11■□□□□ 0.01
MCF2L-206ENST00000397021 DIP2CQ9Y2E4 1556 aa15.11■□□□□ 0.01
MCF2L-206ENST00000397021 CAMSAP2Q08AD1 1489 aa15.1■□□□□ 0.01
MCF2L-206ENST00000397021 PPARGC1BQ86YN6 1023 aaKnown RBP15.09■□□□□ 0.01
MCF2L-206ENST00000397021 ABCA6Q8N139 1617 aa15.09■□□□□ 0.01
MCF2L-206ENST00000397021 MYOM3Q5VTT5 1437 aa15.09■□□□□ 0.01
MCF2L-206ENST00000397021 BCORL1Q5H9F3 1711 aa15.08■□□□□ 0
MCF2L-206ENST00000397021 ADAMTSL3P82987 1691 aa15.07■□□□□ 0
MCF2L-206ENST00000397021 PTPRMP28827 1452 aa15.07■□□□□ 0
MCF2L-206ENST00000397021 MADDQ8WXG6 1647 aa15.06■□□□□ 0
MCF2L-206ENST00000397021 ATP7AQ04656 1500 aa15.06■□□□□ 0
MCF2L-206ENST00000397021 KIDINS220Q9ULH0 1771 aa15.06■□□□□ 0
MCF2L-206ENST00000397021 CCDC141Q6ZP82 1450 aa15.04■□□□□ -0
MCF2L-206ENST00000397021 MIA2Q96PC5 1412 aa15.04■□□□□ -0
MCF2L-206ENST00000397021 TSPY4P0CV99 314 aa15.03■□□□□ -0
MCF2L-206ENST00000397021 TSPY10P0CW01 314 aa15.03■□□□□ -0
MCF2L-206ENST00000397021 RSPH4AQ5TD94 716 aa15.03■□□□□ -0
MCF2L-206ENST00000397021 INO80Q9ULG1 1556 aaPredicted RBP15.02■□□□□ -0
MCF2L-206ENST00000397021 CEBPAP49715 358 aaPredicted RBP15.02■□□□□ -0
MCF2L-206ENST00000397021 A2MP01023 1474 aa15.01□□□□□ -0.01
MCF2L-206ENST00000397021 REREQ9P2R6 1566 aa15.01□□□□□ -0.01
MCF2L-206ENST00000397021 RIMS1Q86UR5 1692 aaKnown RBP15□□□□□ -0.01
MCF2L-206ENST00000397021 RTEL1-TNFRSF6BF6WH68 1400 aa15□□□□□ -0.01
MCF2L-206ENST00000397021 FGD6Q6ZV73 1430 aa15□□□□□ -0.01
MCF2L-206ENST00000397021 AGLP35573 1532 aa14.99□□□□□ -0.01
MCF2L-206ENST00000397021 GGT6Q6P531 493 aa14.99□□□□□ -0.01
MCF2L-206ENST00000397021 ESF1Q9H501 851 aaKnown RBP14.99□□□□□ -0.01
MCF2L-206ENST00000397021 FAM50AQ14320 339 aaKnown RBP14.98□□□□□ -0.01
MCF2L-206ENST00000397021 ARHGEF5Q12774 1597 aa14.98□□□□□ -0.01
MCF2L-206ENST00000397021 DHX29Q7Z478 1369 aaKnown RBP14.97□□□□□ -0.01
MCF2L-206ENST00000397021 PTPN23Q9H3S7 1636 aa14.96□□□□□ -0.01
MCF2L-206ENST00000397021 ABCC5O15440 1437 aa14.96□□□□□ -0.01
MCF2L-206ENST00000397021 KIF3BO15066 747 aa14.95□□□□□ -0.02
MCF2L-206ENST00000397021 CHIC2Q9UKJ5 165 aa14.95□□□□□ -0.02
MCF2L-206ENST00000397021 PLXNC1O60486 1568 aa14.94□□□□□ -0.02
MCF2L-206ENST00000397021 TCOF1Q13428 1488 aaKnown RBP14.94□□□□□ -0.02
MCF2L-206ENST00000397021 RRP7BPQ9NSQ0 103 aa14.93□□□□□ -0.02
MCF2L-206ENST00000397021 FER1L4A9Z1Z3 1794 aa14.93□□□□□ -0.02
MCF2L-206ENST00000397021 DAPK1P53355 1430 aa14.92□□□□□ -0.02
MCF2L-206ENST00000397021 HSPA2P54652 639 aa14.9□□□□□ -0.02
MCF2L-206ENST00000397021 ADGBQ8N7X0 1667 aa14.9□□□□□ -0.02
MCF2L-206ENST00000397021 MAST1Q9Y2H9 1570 aa14.9□□□□□ -0.02
MCF2L-206ENST00000397021 ZMYM3Q14202 1370 aa14.88□□□□□ -0.03
MCF2L-206ENST00000397021 ITGAEP38570 1179 aa14.88□□□□□ -0.03
MCF2L-206ENST00000397021 KIF15Q9NS87 1388 aa14.87□□□□□ -0.03
MCF2L-206ENST00000397021 CNTLNQ9NXG0 1405 aa14.87□□□□□ -0.03
MCF2L-206ENST00000397021 LMTK3Q96Q04 1460 aa14.87□□□□□ -0.03
MCF2L-206ENST00000397021 DNMT1P26358 1616 aaKnown RBP14.86□□□□□ -0.03
MCF2L-206ENST00000397021 SHANK2Q9UPX8 1470 aa14.86□□□□□ -0.03
MCF2L-206ENST00000397021 WASHC2CQ9Y4E1 1318 aa14.85□□□□□ -0.03
MCF2L-206ENST00000397021 PPP6R1Q9UPN7 881 aa14.84□□□□□ -0.03
MCF2L-206ENST00000397021 ANKRD30AQ9BXX3 1397 aa14.84□□□□□ -0.03
MCF2L-206ENST00000397021 PTPRKQ15262 1439 aa14.83□□□□□ -0.03
MCF2L-206ENST00000397021 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.83□□□□□ -0.043e-6■■□□□ 13.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms