RNA–Protein interactions for RNA: ENST00000396307.6

RAB27A-202, Transcript of RAB27A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB27A, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB27A-202ENST00000396307 VPS8Q8N3P4 1428 aa12.64□□□□□ -0.39
RAB27A-202ENST00000396307 UNC13BO14795 1591 aa12.64□□□□□ -0.39
RAB27A-202ENST00000396307 SIGLEC1Q9BZZ2 1709 aa12.62□□□□□ -0.39
RAB27A-202ENST00000396307 KIF14Q15058 1648 aa12.61□□□□□ -0.39
RAB27A-202ENST00000396307 TTC37Q6PGP7 1564 aa12.61□□□□□ -0.39
RAB27A-202ENST00000396307 AKNAQ7Z591 1439 aa12.6□□□□□ -0.39
RAB27A-202ENST00000396307 IFT172Q9UG01 1749 aa12.59□□□□□ -0.39
RAB27A-202ENST00000396307 SHANK2Q9UPX8 1470 aa12.59□□□□□ -0.39
RAB27A-202ENST00000396307 CEP162Q5TB80 1403 aa12.59□□□□□ -0.39
RAB27A-202ENST00000396307 RRBP1Q9P2E9 1410 aaKnown RBP12.59□□□□□ -0.39
RAB27A-202ENST00000396307 MROH1Q8NDA8 1641 aa12.59□□□□□ -0.39
RAB27A-202ENST00000396307 MROH2AA6NES4 1674 aa12.58□□□□□ -0.4
RAB27A-202ENST00000396307 ADGRL2O95490 1459 aa12.58□□□□□ -0.4
RAB27A-202ENST00000396307 EPRSP07814 1512 aaKnown RBP12.57□□□□□ -0.4
RAB27A-202ENST00000396307 ZC3H13Q5T200 1668 aaKnown RBP12.57□□□□□ -0.4
RAB27A-202ENST00000396307 SAMD9LQ8IVG5 1584 aa12.56□□□□□ -0.4
RAB27A-202ENST00000396307 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.56□□□□□ -0.4
RAB27A-202ENST00000396307 TDRD9Q8NDG6 1382 aaKnown RBP12.55□□□□□ -0.4
RAB27A-202ENST00000396307 PLPPR3Q6T4P5 718 aa12.55□□□□□ -0.4
RAB27A-202ENST00000396307 CLIP1P30622 1438 aa12.55□□□□□ -0.4
RAB27A-202ENST00000396307 ABCC1P33527 1531 aa12.55□□□□□ -0.4
RAB27A-202ENST00000396307 RANGAP1P46060 587 aaPredicted RBP12.52□□□□□ -0.4
RAB27A-202ENST00000396307 LRRC9Q6ZRR7 1453 aa12.52□□□□□ -0.41
RAB27A-202ENST00000396307 PLEKHG5O94827 1062 aa12.5□□□□□ -0.41
RAB27A-202ENST00000396307 FMN1Q68DA7 1419 aa12.5□□□□□ -0.41
RAB27A-202ENST00000396307 HNRNPUL2Q1KMD3 747 aaKnown RBP12.49□□□□□ -0.41
RAB27A-202ENST00000396307 KIDINS220Q9ULH0 1771 aa12.49□□□□□ -0.41
RAB27A-202ENST00000396307 CAMSAP2Q08AD1 1489 aa12.49□□□□□ -0.41
RAB27A-202ENST00000396307 PIK3C2BO00750 1634 aa12.48□□□□□ -0.41
RAB27A-202ENST00000396307 IQGAP3Q86VI3 1631 aa12.46□□□□□ -0.41
RAB27A-202ENST00000396307 PTPN23Q9H3S7 1636 aa12.46□□□□□ -0.41
RAB27A-202ENST00000396307 ATP10BO94823 1461 aa12.46□□□□□ -0.42
RAB27A-202ENST00000396307 UBTFP17480 764 aaKnown RBP12.45□□□□□ -0.42
RAB27A-202ENST00000396307 CSRNP3Q8WYN3 585 aa12.45□□□□□ -0.42
RAB27A-202ENST00000396307 MIER1Q8N108 512 aa12.43□□□□□ -0.42
RAB27A-202ENST00000396307 LMTK2Q8IWU2 1503 aa12.43□□□□□ -0.42
RAB27A-202ENST00000396307 POLR1AO95602 1720 aaPredicted RBP12.43□□□□□ -0.42
RAB27A-202ENST00000396307 ABCA6Q8N139 1617 aa12.42□□□□□ -0.42
RAB27A-202ENST00000396307 CARMIL2Q6F5E8 1435 aa12.42□□□□□ -0.42
RAB27A-202ENST00000396307 ZNF316A6NFI3 1004 aaPredicted RBP12.41□□□□□ -0.42
RAB27A-202ENST00000396307 MIA2Q96PC5 1412 aa12.41□□□□□ -0.42
RAB27A-202ENST00000396307 ZFYVE16Q7Z3T8 1539 aa12.4□□□□□ -0.42
RAB27A-202ENST00000396307 PRDM15P57071 1507 aaPredicted RBP12.4□□□□□ -0.42
RAB27A-202ENST00000396307 CHMP7Q8WUX9 453 aaPredicted RBP12.39□□□□□ -0.43
RAB27A-202ENST00000396307 ZNF142P52746 1687 aaPredicted RBP12.39□□□□□ -0.43
RAB27A-202ENST00000396307 MBD5Q9P267 1494 aa12.39□□□□□ -0.43
RAB27A-202ENST00000396307 SETD1AO15047 1707 aaKnown RBP12.39□□□□□ -0.43
RAB27A-202ENST00000396307 UACAQ9BZF9 1416 aa12.37□□□□□ -0.43
RAB27A-202ENST00000396307 ZNF518AQ6AHZ1 1483 aa12.37□□□□□ -0.43
RAB27A-202ENST00000396307 PRG4Q92954 1404 aaPredicted RBP12.37□□□□□ -0.43
RAB27A-202ENST00000396307 RTN4Q9NQC3 1192 aaKnown RBP12.36□□□□□ -0.43
RAB27A-202ENST00000396307 LAMC1P11047 1609 aa12.36□□□□□ -0.43
RAB27A-202ENST00000396307 CEP152O94986 1710 aa12.36□□□□□ -0.43
RAB27A-202ENST00000396307 PLB1Q6P1J6 1458 aa12.36□□□□□ -0.43
RAB27A-202ENST00000396307 AGLP35573 1532 aa12.36□□□□□ -0.43
RAB27A-202ENST00000396307 PTPRGP23470 1445 aa12.35□□□□□ -0.43
RAB27A-202ENST00000396307 DENND4BO75064 1496 aaPredicted RBP12.34□□□□□ -0.43
RAB27A-202ENST00000396307 ARHGEF40Q8TER5 1519 aa12.34□□□□□ -0.43
RAB27A-202ENST00000396307 KIAA1107Q9UPP5 1409 aa12.34□□□□□ -0.43
RAB27A-202ENST00000396307 PHLDB1Q86UU1 1377 aa12.34□□□□□ -0.43
RAB27A-202ENST00000396307 NEO1Q92859 1461 aa12.32□□□□□ -0.44
RAB27A-202ENST00000396307 HECW2Q9P2P5 1572 aa12.31□□□□□ -0.44
RAB27A-202ENST00000396307 TROQ12816 1431 aaPredicted RBP12.31□□□□□ -0.44
RAB27A-202ENST00000396307 KIAA1210Q9ULL0 1709 aa12.31□□□□□ -0.44
RAB27A-202ENST00000396307 DIP2CQ9Y2E4 1556 aa12.3□□□□□ -0.44
RAB27A-202ENST00000396307 CDK13Q14004 1512 aaKnown RBP12.3□□□□□ -0.44
RAB27A-202ENST00000396307 GPATCH8Q9UKJ3 1502 aaKnown RBP12.3□□□□□ -0.44
RAB27A-202ENST00000396307 ADAMTSL3P82987 1691 aa12.3□□□□□ -0.44
RAB27A-202ENST00000396307 FER1L4A9Z1Z3 1794 aa12.29□□□□□ -0.44
RAB27A-202ENST00000396307 ATP10AO60312 1499 aa12.28□□□□□ -0.44
RAB27A-202ENST00000396307 MADDQ8WXG6 1647 aa12.28□□□□□ -0.44
RAB27A-202ENST00000396307 NCBP3Q53F19 620 aaKnown RBP12.27□□□□□ -0.44
RAB27A-202ENST00000396307 TET3O43151 1660 aa12.27□□□□□ -0.44
RAB27A-202ENST00000396307 ARHGEF12Q9NZN5 1544 aa12.27□□□□□ -0.45
RAB27A-202ENST00000396307 JPH4Q96JJ6 628 aa12.27□□□□□ -0.45
RAB27A-202ENST00000396307 BCANQ96GW7 911 aa12.27□□□□□ -0.45
RAB27A-202ENST00000396307 RIMS1Q86UR5 1692 aaKnown RBP12.26□□□□□ -0.45
RAB27A-202ENST00000396307 KDM6BO15054 1643 aa12.25□□□□□ -0.45
RAB27A-202ENST00000396307 RTEL1-TNFRSF6BF6WH68 1400 aa12.25□□□□□ -0.45
RAB27A-202ENST00000396307 NCOA2Q15596 1464 aa12.23□□□□□ -0.45
RAB27A-202ENST00000396307 MLH3Q9UHC1 1453 aa12.23□□□□□ -0.45
RAB27A-202ENST00000396307 FHOD3Q2V2M9 1422 aa12.23□□□□□ -0.45
RAB27A-202ENST00000396307 ROCK1Q13464 1354 aa12.23□□□□□ -0.45
RAB27A-202ENST00000396307 TEX14Q8IWB6 1497 aa12.22□□□□□ -0.45
RAB27A-202ENST00000396307 SPHKAPQ2M3C7 1700 aa12.21□□□□□ -0.45
RAB27A-202ENST00000396307 E9PCH4 1651 aa12.2□□□□□ -0.46
RAB27A-202ENST00000396307 MYO3AQ8NEV4 1616 aa12.2□□□□□ -0.46
RAB27A-202ENST00000396307 PLCH2O75038 1416 aa12.19□□□□□ -0.46
RAB27A-202ENST00000396307 CAMSAP1Q5T5Y3 1602 aa12.19□□□□□ -0.46
RAB27A-202ENST00000396307 PRAG1Q86YV5 1406 aa12.19□□□□□ -0.46
RAB27A-202ENST00000396307 KLHL34Q8N239 644 aa12.18□□□□□ -0.46
RAB27A-202ENST00000396307 USP54Q70EL1 1684 aa12.18□□□□□ -0.46
RAB27A-202ENST00000396307 MYOM3Q5VTT5 1437 aa12.18□□□□□ -0.46
RAB27A-202ENST00000396307 KNDC1Q76NI1 1749 aa12.18□□□□□ -0.46
RAB27A-202ENST00000396307 ITGAEP38570 1179 aa12.17□□□□□ -0.46
RAB27A-202ENST00000396307 PLEKHH2Q8IVE3 1493 aa12.17□□□□□ -0.46
RAB27A-202ENST00000396307 TMEM131LA2VDJ0 1609 aa12.16□□□□□ -0.46
RAB27A-202ENST00000396307 EFCAB6Q5THR3 1501 aa12.16□□□□□ -0.46
RAB27A-202ENST00000396307 PPLO60437 1756 aa12.15□□□□□ -0.46
RAB27A-202ENST00000396307 FGD6Q6ZV73 1430 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms