RNA–Protein interactions for RNA: ENST00000396193.5

PDE1C-206, Transcript of phosphodiesterase 1C, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PDE1C, Length 5,109 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-206ENST00000396193 PKD2Q13563 968 aa22.72■■□□□ 1.23
PDE1C-206ENST00000396193 CHAF1AQ13111 956 aaPredicted RBP22.71■■□□□ 1.23
PDE1C-206ENST00000396193 L3MBTL2Q969R5 705 aa22.7■■□□□ 1.23
PDE1C-206ENST00000396193 GZF1Q9H116 711 aaPredicted RBP22.7■■□□□ 1.22
PDE1C-206ENST00000396193 U2SURPO15042 1029 aaKnown RBP22.7■■□□□ 1.22
PDE1C-206ENST00000396193 ZRSR1Q15695 479 aaKnown RBP22.69■■□□□ 1.22
PDE1C-206ENST00000396193 GOLGA6L3A6NEY3 463 aa22.69■■□□□ 1.22
PDE1C-206ENST00000396193 FMN1Q68DA7 1419 aa22.66■■□□□ 1.22
PDE1C-206ENST00000396193 PDE3BQ13370 1112 aa22.65■■□□□ 1.22
PDE1C-206ENST00000396193 GBP4Q96PP9 640 aa22.65■■□□□ 1.22
PDE1C-206ENST00000396193 HSP90AA2PQ14568 343 aaPredicted RBP22.64■■□□□ 1.22
PDE1C-206ENST00000396193 GSE1Q14687 1217 aa22.64■■□□□ 1.21
PDE1C-206ENST00000396193 PLPPR3Q6T4P5 718 aa22.63■■□□□ 1.21
PDE1C-206ENST00000396193 PTMSP20962 102 aa22.62■■□□□ 1.21
PDE1C-206ENST00000396193 NLRP13Q86W25 1043 aa22.61■■□□□ 1.21
PDE1C-206ENST00000396193 MORC1Q86VD1 984 aa22.6■■□□□ 1.21
PDE1C-206ENST00000396193 RWDD1Q9H446 243 aaPredicted RBP22.6■■□□□ 1.21
PDE1C-206ENST00000396193 PDE4AP27815 886 aa22.6■■□□□ 1.21
PDE1C-206ENST00000396193 PRKRIP1Q9H875 184 aaPredicted RBP22.59■■□□□ 1.21
PDE1C-206ENST00000396193 ZBED9Q6R2W3 1325 aa22.59■■□□□ 1.21
PDE1C-206ENST00000396193 VSIG10Q8N0Z9 540 aa22.57■■□□□ 1.2
PDE1C-206ENST00000396193 RAPGEF2Q9Y4G8 1499 aa22.56■■□□□ 1.2
PDE1C-206ENST00000396193 ROCK2O75116 1388 aaKnown RBP22.56■■□□□ 1.2
PDE1C-206ENST00000396193 GOLGA2Q08379 1002 aa22.55■■□□□ 1.2
PDE1C-206ENST00000396193 POGKQ9P215 609 aa22.55■■□□□ 1.2
PDE1C-206ENST00000396193 CFAP44Q96MT7 982 aa22.54■■□□□ 1.2
PDE1C-206ENST00000396193 GOLGA6L6A8MZA4 724 aa22.54■■□□□ 1.2
PDE1C-206ENST00000396193 NRDCO43847 1150 aa22.54■■□□□ 1.2
PDE1C-206ENST00000396193 ARID3AQ99856 593 aa22.53■■□□□ 1.2
PDE1C-206ENST00000396193 PMFBP1Q8TBY8 1022 aa22.53■■□□□ 1.2
PDE1C-206ENST00000396193 KIAA2012Q0VF49 1180 aa22.52■■□□□ 1.2
PDE1C-206ENST00000396193 IPO8O15397 1037 aaKnown RBP22.52■■□□□ 1.2
PDE1C-206ENST00000396193 C14orf37Q86TY3 774 aa22.51■■□□□ 1.19
PDE1C-206ENST00000396193 EIF4G1Q04637 1599 aaKnown RBP22.5■■□□□ 1.19
PDE1C-206ENST00000396193 ZBTB7CA1YPR0 619 aa22.5■■□□□ 1.19
PDE1C-206ENST00000396193 EXOC6Q8TAG9 804 aa22.49■■□□□ 1.19
PDE1C-206ENST00000396193 NUP155O75694 1391 aa22.49■■□□□ 1.19
PDE1C-206ENST00000396193 AMER1Q5JTC6 1135 aaPredicted RBP22.49■■□□□ 1.19
PDE1C-206ENST00000396193 MFAP1P55081 439 aaKnown RBP22.48■■□□□ 1.19
PDE1C-206ENST00000396193 RUSC2Q8N2Y8 1516 aa22.48■■□□□ 1.19
PDE1C-206ENST00000396193 GOLGA6L4A6NEF3 574 aa22.48■■□□□ 1.19
PDE1C-206ENST00000396193 MCCP23508 829 aa22.48■■□□□ 1.19
PDE1C-206ENST00000396193 SLC4A3P48751 1232 aa22.47■■□□□ 1.19
PDE1C-206ENST00000396193 WIZO95785 1651 aa22.47■■□□□ 1.19
PDE1C-206ENST00000396193 RRP1P56182 461 aaKnown RBP22.47■■□□□ 1.19
PDE1C-206ENST00000396193 KCNJ4P48050 445 aa22.46■■□□□ 1.19
PDE1C-206ENST00000396193 ITPRIPQ8IWB1 547 aa22.46■■□□□ 1.19
PDE1C-206ENST00000396193 FAM161AQ3B820 660 aa22.45■■□□□ 1.19
PDE1C-206ENST00000396193 MYBBP1AQ9BQG0 1328 aaKnown RBP22.45■■□□□ 1.18
PDE1C-206ENST00000396193 TOP2AP11388 1531 aaKnown RBP22.45■■□□□ 1.18
PDE1C-206ENST00000396193 CENPQQ7L2Z9 268 aaPredicted RBP22.45■■□□□ 1.18
PDE1C-206ENST00000396193 KIF15Q9NS87 1388 aa22.45■■□□□ 1.18
PDE1C-206ENST00000396193 U2AF1L5P0DN76 240 aaPredicted RBP22.44■■□□□ 1.18
PDE1C-206ENST00000396193 U2AF1Q01081 240 aaKnown RBP eCLIP22.44■■□□□ 1.18
PDE1C-206ENST00000396193 OS9Q13438 667 aaPredicted RBP22.43■■□□□ 1.18
PDE1C-206ENST00000396193 FGD1P98174 961 aa22.42■■□□□ 1.18
PDE1C-206ENST00000396193 PHLDB1Q86UU1 1377 aa22.42■■□□□ 1.18
PDE1C-206ENST00000396193 PLEKHG5O94827 1062 aa22.42■■□□□ 1.18
PDE1C-206ENST00000396193 PLIN1O60240 522 aa22.41■■□□□ 1.18
PDE1C-206ENST00000396193 DRC7Q8IY82 874 aa22.41■■□□□ 1.18
PDE1C-206ENST00000396193 ANKRD30AQ9BXX3 1397 aa22.4■■□□□ 1.18
PDE1C-206ENST00000396193 CLUAP1Q96AJ1 413 aa22.4■■□□□ 1.18
PDE1C-206ENST00000396193 CENPJQ9HC77 1338 aaPredicted RBP22.4■■□□□ 1.18
PDE1C-206ENST00000396193 HAP1P54257 671 aaPredicted RBP22.4■■□□□ 1.18
PDE1C-206ENST00000396193 SRPK2P78362 688 aaKnown RBP22.39■■□□□ 1.18
PDE1C-206ENST00000396193 FHOD3Q2V2M9 1422 aa22.39■■□□□ 1.17
PDE1C-206ENST00000396193 CCDC146Q8IYE0 955 aa22.39■■□□□ 1.17
PDE1C-206ENST00000396193 APBB1O00213 710 aa22.38■■□□□ 1.17
PDE1C-206ENST00000396193 CALD1Q05682 793 aaKnown RBP22.37■■□□□ 1.17
PDE1C-206ENST00000396193 KANK1Q14678 1352 aa22.37■■□□□ 1.17
PDE1C-206ENST00000396193 ST20-MTHFSA0A0A6YYL1 179 aa22.37■■□□□ 1.17
PDE1C-206ENST00000396193 CRBNQ96SW2 442 aa22.37■■□□□ 1.17
PDE1C-206ENST00000396193 SYAP1Q96A49 352 aaPredicted RBP22.36■■□□□ 1.17
PDE1C-206ENST00000396193 SMC4Q9NTJ3 1288 aa22.35■■□□□ 1.17
PDE1C-206ENST00000396193 DDX11L8A8MPP1 907 aa22.35■■□□□ 1.17
PDE1C-206ENST00000396193 SAFB2Q14151 953 aaKnown RBP eCLIP22.33■■□□□ 1.16
PDE1C-206ENST00000396193 ANO8Q9HCE9 1232 aaPredicted RBP22.3■■□□□ 1.16
PDE1C-206ENST00000396193 NAP1L2Q9ULW6 460 aaPredicted RBP22.3■■□□□ 1.16
PDE1C-206ENST00000396193 FOXD4L1Q9NU39 408 aa22.29■■□□□ 1.16
PDE1C-206ENST00000396193 CCDC18Q5T9S5 1454 aa22.28■■□□□ 1.16
PDE1C-206ENST00000396193 PANK3Q9H999 370 aa22.28■■□□□ 1.16
PDE1C-206ENST00000396193 TNNT3P45378 269 aaPredicted RBP22.27■■□□□ 1.16
PDE1C-206ENST00000396193 TAOK2Q9UL54 1235 aa22.27■■□□□ 1.16
PDE1C-206ENST00000396193 KIAA1211Q6ZU35 1233 aa22.26■■□□□ 1.15
PDE1C-206ENST00000396193 USP47Q96K76 1375 aa22.26■■□□□ 1.15
PDE1C-206ENST00000396193 SMARCA2P51531 1590 aa22.26■■□□□ 1.15
PDE1C-206ENST00000396193 TDRD9Q8NDG6 1382 aaKnown RBP22.25■■□□□ 1.15
PDE1C-206ENST00000396193 CGNL1Q0VF96 1302 aa22.24■■□□□ 1.15
PDE1C-206ENST00000396193 HDGFL2Q7Z4V5 671 aaPredicted RBP22.23■■□□□ 1.15
PDE1C-206ENST00000396193 EIF3AQ14152 1382 aaKnown RBP22.23■■□□□ 1.15
PDE1C-206ENST00000396193 NFKBIBQ15653 356 aa22.23■■□□□ 1.15
PDE1C-206ENST00000396193 SKOR2Q2VWA4 1001 aaPredicted RBP22.22■■□□□ 1.15
PDE1C-206ENST00000396193 CCDC7Q96M83 1385 aa22.22■■□□□ 1.15
PDE1C-206ENST00000396193 E9PSI1 815 aa22.21■■□□□ 1.15
PDE1C-206ENST00000396193 A0A0G2JS52 829 aa22.21■■□□□ 1.15
PDE1C-206ENST00000396193 RTF1Q92541 710 aaKnown RBP22.2■■□□□ 1.14
PDE1C-206ENST00000396193 STK26Q9P289 416 aa22.2■■□□□ 1.14
PDE1C-206ENST00000396193 COG6Q9Y2V7 657 aa22.19■■□□□ 1.14
PDE1C-206ENST00000396193 DDX49Q9Y6V7 483 aaKnown RBP22.19■■□□□ 1.14
PDE1C-206ENST00000396193 SOX12O15370 315 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms