RNA–Protein interactions for RNA: ENST00000395146.8

AFF1-202, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AFF1, Length 9,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-202ENST00000395146 SENP3Q9H4L4 574 aaPredicted RBP13.74□□□□□ -0.21
AFF1-202ENST00000395146 HAP1P54257 671 aaPredicted RBP13.73□□□□□ -0.21
AFF1-202ENST00000395146 PKD2Q13563 968 aa13.73□□□□□ -0.21
AFF1-202ENST00000395146 MORC1Q86VD1 984 aa13.73□□□□□ -0.21
AFF1-202ENST00000395146 MCCP23508 829 aa13.72□□□□□ -0.21
AFF1-202ENST00000395146 MSNP26038 577 aaKnown RBP13.72□□□□□ -0.21
AFF1-202ENST00000395146 MPHOSPH9Q99550 1183 aa13.72□□□□□ -0.21
AFF1-202ENST00000395146 ROCK2O75116 1388 aaKnown RBP13.71□□□□□ -0.21
AFF1-202ENST00000395146 NRDCO43847 1150 aa13.71□□□□□ -0.21
AFF1-202ENST00000395146 IPO9Q96P70 1041 aaKnown RBP13.71□□□□□ -0.22
AFF1-202ENST00000395146 CHAF1AQ13111 956 aaPredicted RBP13.71□□□□□ -0.22
AFF1-202ENST00000395146 IPO8O15397 1037 aaKnown RBP13.7□□□□□ -0.22
AFF1-202ENST00000395146 RWDD1Q9H446 243 aaPredicted RBP13.69□□□□□ -0.22
AFF1-202ENST00000395146 PLCB2Q00722 1185 aa13.69□□□□□ -0.22
AFF1-202ENST00000395146 OS9Q13438 667 aaPredicted RBP13.69□□□□□ -0.22
AFF1-202ENST00000395146 TPRNQ4KMQ1 711 aa13.69□□□□□ -0.22
AFF1-202ENST00000395146 GBP4Q96PP9 640 aa13.69□□□□□ -0.22
AFF1-202ENST00000395146 ANKRD30AQ9BXX3 1397 aa13.68□□□□□ -0.22
AFF1-202ENST00000395146 PDE3BQ13370 1112 aa13.68□□□□□ -0.22
AFF1-202ENST00000395146 EIF3AQ14152 1382 aaKnown RBP13.68□□□□□ -0.22
AFF1-202ENST00000395146 ERCC6Q03468 1493 aa13.68□□□□□ -0.22
AFF1-202ENST00000395146 GOLGA6L4A6NEF3 574 aa13.66□□□□□ -0.22
AFF1-202ENST00000395146 KCNJ4P48050 445 aa13.66□□□□□ -0.22
AFF1-202ENST00000395146 DHX57Q6P158 1386 aaKnown RBP13.66□□□□□ -0.22
AFF1-202ENST00000395146 PHLDB1Q86UU1 1377 aa13.65□□□□□ -0.22
AFF1-202ENST00000395146 FGD1P98174 961 aa13.65□□□□□ -0.22
AFF1-202ENST00000395146 FOXD1Q16676 465 aa13.65□□□□□ -0.22
AFF1-202ENST00000395146 CARMIL2Q6F5E8 1435 aa13.65□□□□□ -0.22
AFF1-202ENST00000395146 NUP155O75694 1391 aa13.65□□□□□ -0.22
AFF1-202ENST00000395146 CALD1Q05682 793 aaKnown RBP13.65□□□□□ -0.22
AFF1-202ENST00000395146 PMFBP1Q8TBY8 1022 aa13.64□□□□□ -0.23
AFF1-202ENST00000395146 RAPGEF2Q9Y4G8 1499 aa13.64□□□□□ -0.23
AFF1-202ENST00000395146 WIZO95785 1651 aa13.64□□□□□ -0.23
AFF1-202ENST00000395146 NLRP13Q86W25 1043 aa13.63□□□□□ -0.23
AFF1-202ENST00000395146 SRPK2P78362 688 aaKnown RBP13.63□□□□□ -0.23
AFF1-202ENST00000395146 A0A0G2JS52 829 aa13.63□□□□□ -0.23
AFF1-202ENST00000395146 SPRYD3Q8NCJ5 442 aa13.63□□□□□ -0.23
AFF1-202ENST00000395146 L3MBTL2Q969R5 705 aa13.62□□□□□ -0.23
AFF1-202ENST00000395146 KIF15Q9NS87 1388 aa13.61□□□□□ -0.23
AFF1-202ENST00000395146 PLEKHG5O94827 1062 aa13.61□□□□□ -0.23
AFF1-202ENST00000395146 USP35Q9P2H5 1018 aa13.61□□□□□ -0.23
AFF1-202ENST00000395146 GOLGA2Q08379 1002 aa13.6□□□□□ -0.23
AFF1-202ENST00000395146 CCDC18Q5T9S5 1454 aa13.6□□□□□ -0.23
AFF1-202ENST00000395146 HDGFP51858 240 aaKnown RBP13.6□□□□□ -0.23
AFF1-202ENST00000395146 ITPRIPQ8IWB1 547 aa13.6□□□□□ -0.23
AFF1-202ENST00000395146 HDGFL2Q7Z4V5 671 aaPredicted RBP13.59□□□□□ -0.23
AFF1-202ENST00000395146 SLKQ9H2G2 1235 aaPredicted RBP13.59□□□□□ -0.23
AFF1-202ENST00000395146 GOLGA6L3A6NEY3 463 aa13.58□□□□□ -0.23
AFF1-202ENST00000395146 SYAP1Q96A49 352 aaPredicted RBP13.57□□□□□ -0.24
AFF1-202ENST00000395146 MYBBP1AQ9BQG0 1328 aaKnown RBP13.57□□□□□ -0.24
AFF1-202ENST00000395146 U2AF1L5P0DN76 240 aaPredicted RBP13.57□□□□□ -0.24
AFF1-202ENST00000395146 U2AF1Q01081 240 aaKnown RBP eCLIP13.57□□□□□ -0.24
AFF1-202ENST00000395146 FHOD3Q2V2M9 1422 aa13.57□□□□□ -0.24
AFF1-202ENST00000395146 ZBED9Q6R2W3 1325 aa13.57□□□□□ -0.24
AFF1-202ENST00000395146 KIAA2012Q0VF49 1180 aa13.56□□□□□ -0.24
AFF1-202ENST00000395146 PDS5BQ9NTI5 1447 aa13.56□□□□□ -0.24
AFF1-202ENST00000395146 RTF1Q92541 710 aaKnown RBP13.56□□□□□ -0.24
AFF1-202ENST00000395146 DRC7Q8IY82 874 aa13.55□□□□□ -0.24
AFF1-202ENST00000395146 CENPJQ9HC77 1338 aaPredicted RBP13.55□□□□□ -0.24
AFF1-202ENST00000395146 KIAA1211Q6ZU35 1233 aa13.55□□□□□ -0.24
AFF1-202ENST00000395146 NAP1L2Q9ULW6 460 aaPredicted RBP13.54□□□□□ -0.24
AFF1-202ENST00000395146 GZF1Q9H116 711 aaPredicted RBP13.53□□□□□ -0.24
AFF1-202ENST00000395146 FANCIQ9NVI1 1328 aa13.53□□□□□ -0.24
AFF1-202ENST00000395146 RSPH4AQ5TD94 716 aa13.53□□□□□ -0.24
AFF1-202ENST00000395146 MFAP1P55081 439 aaKnown RBP13.52□□□□□ -0.24
AFF1-202ENST00000395146 CENPQQ7L2Z9 268 aaPredicted RBP13.52□□□□□ -0.24
AFF1-202ENST00000395146 SMC4Q9NTJ3 1288 aa13.52□□□□□ -0.25
AFF1-202ENST00000395146 HTATSF1O43719 755 aaKnown RBP13.52□□□□□ -0.25
AFF1-202ENST00000395146 CHMP4AQ9BY43 222 aa13.51□□□□□ -0.25
AFF1-202ENST00000395146 PRKRIP1Q9H875 184 aaPredicted RBP13.51□□□□□ -0.25
AFF1-202ENST00000395146 SAFB2Q14151 953 aaKnown RBP eCLIP13.51□□□□□ -0.254e-6■■■■□ 19.5
AFF1-202ENST00000395146 EFCAB2Q5VUJ9 269 aa13.51□□□□□ -0.25
AFF1-202ENST00000395146 LMOD2Q6P5Q4 547 aa13.5□□□□□ -0.25
AFF1-202ENST00000395146 TDRD9Q8NDG6 1382 aaKnown RBP13.5□□□□□ -0.25
AFF1-202ENST00000395146 HMMRO75330 724 aa13.49□□□□□ -0.25
AFF1-202ENST00000395146 DDX11L8A8MPP1 907 aa13.49□□□□□ -0.25
AFF1-202ENST00000395146 FAM161AQ3B820 660 aa13.49□□□□□ -0.25
AFF1-202ENST00000395146 SMARCA4P51532 1647 aa13.48□□□□□ -0.25
AFF1-202ENST00000395146 APBB1O00213 710 aa13.48□□□□□ -0.25
AFF1-202ENST00000395146 PDE4AP27815 886 aa13.48□□□□□ -0.25
AFF1-202ENST00000395146 RRP1P56182 461 aaKnown RBP13.48□□□□□ -0.25
AFF1-202ENST00000395146 TERF2IPQ9NYB0 399 aa13.48□□□□□ -0.25
AFF1-202ENST00000395146 CCDC144AA2RUR9 1427 aa13.47□□□□□ -0.25
AFF1-202ENST00000395146 LMOD3Q0VAK6 560 aa13.46□□□□□ -0.25
AFF1-202ENST00000395146 CSPP1Q1MSJ5 1256 aa13.46□□□□□ -0.25
AFF1-202ENST00000395146 CADPSQ9ULU8 1353 aa13.46□□□□□ -0.25
AFF1-202ENST00000395146 STK26Q9P289 416 aa13.46□□□□□ -0.26
AFF1-202ENST00000395146 TAOK2Q9UL54 1235 aa13.46□□□□□ -0.26
AFF1-202ENST00000395146 SPAG9O60271 1321 aaKnown RBP13.46□□□□□ -0.26
AFF1-202ENST00000395146 GGT6Q6P531 493 aa13.46□□□□□ -0.26
AFF1-202ENST00000395146 STK31Q9BXU1 1019 aa13.45□□□□□ -0.26
AFF1-202ENST00000395146 USP47Q96K76 1375 aa13.45□□□□□ -0.26
AFF1-202ENST00000395146 HDAC5Q9UQL6 1122 aa13.45□□□□□ -0.26
AFF1-202ENST00000395146 CCDC146Q8IYE0 955 aa13.45□□□□□ -0.26
AFF1-202ENST00000395146 GNL2Q13823 731 aaKnown RBP13.45□□□□□ -0.26
AFF1-202ENST00000395146 PHF14O94880 888 aa13.44□□□□□ -0.26
AFF1-202ENST00000395146 GSE1Q14687 1217 aa13.44□□□□□ -0.26
AFF1-202ENST00000395146 RSPH6AQ9H0K4 717 aa13.44□□□□□ -0.26
AFF1-202ENST00000395146 CGNL1Q0VF96 1302 aa13.44□□□□□ -0.26
AFF1-202ENST00000395146 E9PSI1 815 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms