RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 GPATCH8Q9UKJ3 1502 aaKnown RBP37.04■■■■□ 3.52
CTF1-202ENST00000395019 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.03■■■■□ 3.52
CTF1-202ENST00000395019 MYOM3Q5VTT5 1437 aa37.03■■■■□ 3.52
CTF1-202ENST00000395019 FGD6Q6ZV73 1430 aa37.03■■■■□ 3.52
CTF1-202ENST00000395019 ITSN2Q9NZM3 1697 aa37.01■■■■□ 3.51
CTF1-202ENST00000395019 PLCH2O75038 1416 aa36.96■■■■□ 3.51
CTF1-202ENST00000395019 ARHGAP5Q13017 1502 aa36.93■■■■□ 3.5
CTF1-202ENST00000395019 FAM50AQ14320 339 aaKnown RBP36.92■■■■□ 3.5
CTF1-202ENST00000395019 ARAP3Q8WWN8 1544 aa36.89■■■■□ 3.5
CTF1-202ENST00000395019 MIA2Q96PC5 1412 aa36.86■■■■□ 3.49
CTF1-202ENST00000395019 FANCAO15360 1455 aa36.85■■■■□ 3.49
CTF1-202ENST00000395019 SAMD9LQ8IVG5 1584 aa36.85■■■■□ 3.49
CTF1-202ENST00000395019 CFDP1Q9UEE9 299 aaPredicted RBP36.83■■■■□ 3.49
CTF1-202ENST00000395019 PTPN23Q9H3S7 1636 aa36.83■■■■□ 3.49
CTF1-202ENST00000395019 TCOF1Q13428 1488 aaKnown RBP36.81■■■■□ 3.48
CTF1-202ENST00000395019 ITGAEP38570 1179 aa36.81■■■■□ 3.48
CTF1-202ENST00000395019 ZNF644Q9H582 1327 aaPredicted RBP36.8■■■■□ 3.48
CTF1-202ENST00000395019 CFAP74Q9C0B2 1584 aa36.79■■■■□ 3.48
CTF1-202ENST00000395019 ZNF777Q9ULD5 760 aaPredicted RBP36.78■■■■□ 3.48
CTF1-202ENST00000395019 TEX14Q8IWB6 1497 aa36.77■■■■□ 3.48
CTF1-202ENST00000395019 CAMSAP2Q08AD1 1489 aa36.75■■■■□ 3.47
CTF1-202ENST00000395019 EFCAB2Q5VUJ9 269 aa36.75■■■■□ 3.47
CTF1-202ENST00000395019 ZEB1P37275 1124 aaPredicted RBP36.74■■■■□ 3.47
CTF1-202ENST00000395019 NEO1Q92859 1461 aa36.73■■■■□ 3.47
CTF1-202ENST00000395019 CCER1Q8TC90 406 aaPredicted RBP36.73■■■■□ 3.47
CTF1-202ENST00000395019 AKNAQ7Z591 1439 aa36.72■■■■□ 3.47
CTF1-202ENST00000395019 ABCC1P33527 1531 aa36.72■■■■□ 3.47
CTF1-202ENST00000395019 ARHGEF12Q9NZN5 1544 aa36.7■■■■□ 3.46
CTF1-202ENST00000395019 SYCP2Q9BX26 1530 aa36.69■■■■□ 3.46
CTF1-202ENST00000395019 ADGRL1O94910 1474 aa36.67■■■■□ 3.46
CTF1-202ENST00000395019 COL17A1Q9UMD9 1497 aaPredicted RBP36.61■■■■□ 3.45
CTF1-202ENST00000395019 SCAPERQ9BY12 1400 aa36.6■■■■□ 3.45
CTF1-202ENST00000395019 PTPRKQ15262 1439 aa36.6■■■■□ 3.45
CTF1-202ENST00000395019 HNRNPMP52272 730 aaKnown RBP eCLIP36.59■■■■□ 3.45
CTF1-202ENST00000395019 MBD5Q9P267 1494 aa36.59■■■■□ 3.45
CTF1-202ENST00000395019 RICTORQ6R327 1708 aa36.58■■■■□ 3.45
CTF1-202ENST00000395019 SETD5Q9C0A6 1442 aa36.58■■■■□ 3.45
CTF1-202ENST00000395019 PLEKHH2Q8IVE3 1493 aa36.57■■■■□ 3.44
CTF1-202ENST00000395019 FRMPD1Q5SYB0 1578 aa36.57■■■■□ 3.44
CTF1-202ENST00000395019 KIAA1107Q9UPP5 1409 aa36.56■■■■□ 3.44
CTF1-202ENST00000395019 TRAPPC8Q9Y2L5 1435 aa36.56■■■■□ 3.44
CTF1-202ENST00000395019 DNMT1P26358 1616 aaKnown RBP36.52■■■■□ 3.44
CTF1-202ENST00000395019 ARHGEF5Q12774 1597 aa36.52■■■■□ 3.44
CTF1-202ENST00000395019 RAB3GAP2Q9H2M9 1393 aa36.52■■■■□ 3.44
CTF1-202ENST00000395019 CROCC2H7BZ55 1655 aa36.51■■■■□ 3.44
CTF1-202ENST00000395019 KDM6BO15054 1643 aa36.51■■■■□ 3.43
CTF1-202ENST00000395019 POGZQ7Z3K3 1410 aa36.51■■■■□ 3.43
CTF1-202ENST00000395019 DENND4BO75064 1496 aaPredicted RBP36.5■■■■□ 3.43
CTF1-202ENST00000395019 RAPGEF3O95398 923 aa36.5■■■■□ 3.43
CTF1-202ENST00000395019 AFAP1Q8N556 730 aa36.47■■■■□ 3.43
CTF1-202ENST00000395019 ABCC5O15440 1437 aa36.46■■■■□ 3.43
CTF1-202ENST00000395019 CCDC141Q6ZP82 1450 aa36.45■■■■□ 3.43
CTF1-202ENST00000395019 HFM1A2PYH4 1435 aa36.45■■■■□ 3.43
CTF1-202ENST00000395019 DAPK1P53355 1430 aa36.45■■■■□ 3.43
CTF1-202ENST00000395019 KDM5CP41229 1560 aa36.43■■■■□ 3.42
CTF1-202ENST00000395019 ZNF518AQ6AHZ1 1483 aa36.43■■■■□ 3.42
CTF1-202ENST00000395019 DHX57Q6P158 1386 aaKnown RBP36.41■■■■□ 3.42
CTF1-202ENST00000395019 NAIPQ13075 1403 aa36.36■■■■□ 3.41
CTF1-202ENST00000395019 KIDINS220Q9ULH0 1771 aa36.35■■■■□ 3.41
CTF1-202ENST00000395019 INO80Q9ULG1 1556 aaPredicted RBP36.35■■■■□ 3.41
CTF1-202ENST00000395019 ZMYM4Q5VZL5 1548 aa36.35■■■■□ 3.41
CTF1-202ENST00000395019 HECW2Q9P2P5 1572 aa36.34■■■■□ 3.41
CTF1-202ENST00000395019 ZFYVE16Q7Z3T8 1539 aa36.33■■■■□ 3.41
CTF1-202ENST00000395019 ROCK1Q13464 1354 aa36.32■■■■□ 3.4
CTF1-202ENST00000395019 MAST1Q9Y2H9 1570 aa36.32■■■■□ 3.4
CTF1-202ENST00000395019 CLSPNQ9HAW4 1339 aa36.32■■■■□ 3.4
CTF1-202ENST00000395019 CHIC2Q9UKJ5 165 aa36.31■■■■□ 3.4
CTF1-202ENST00000395019 C9orf84Q5VXU9 1444 aa36.31■■■■□ 3.4
CTF1-202ENST00000395019 SHANK2Q9UPX8 1470 aa36.31■■■■□ 3.4
CTF1-202ENST00000395019 RSPH4AQ5TD94 716 aa36.3■■■■□ 3.4
CTF1-202ENST00000395019 ADGBQ8N7X0 1667 aa36.29■■■■□ 3.4
CTF1-202ENST00000395019 ATP7AQ04656 1500 aa36.29■■■■□ 3.4
CTF1-202ENST00000395019 SPAG9O60271 1321 aaKnown RBP36.28■■■■□ 3.4
CTF1-202ENST00000395019 GCC2Q8IWJ2 1684 aa36.28■■■■□ 3.4
CTF1-202ENST00000395019 MLH3Q9UHC1 1453 aa36.26■■■■□ 3.39
CTF1-202ENST00000395019 ABCA6Q8N139 1617 aa36.25■■■■□ 3.39
CTF1-202ENST00000395019 YEATS2Q9ULM3 1422 aa36.25■■■■□ 3.39
CTF1-202ENST00000395019 TSPY4P0CV99 314 aa36.24■■■■□ 3.39
CTF1-202ENST00000395019 TSPY10P0CW01 314 aa36.24■■■■□ 3.39
CTF1-202ENST00000395019 RRP7BPQ9NSQ0 103 aa36.24■■■■□ 3.39
CTF1-202ENST00000395019 RTEL1-TNFRSF6BF6WH68 1400 aa36.2■■■■□ 3.38
CTF1-202ENST00000395019 PLXNC1O60486 1568 aa36.19■■■■□ 3.38
CTF1-202ENST00000395019 DIP2CQ9Y2E4 1556 aa36.19■■■■□ 3.38
CTF1-202ENST00000395019 ADGRL2O95490 1459 aa36.19■■■■□ 3.38
CTF1-202ENST00000395019 MYT1LQ9UL68 1186 aa36.19■■■■□ 3.38
CTF1-202ENST00000395019 ARHGEF40Q8TER5 1519 aa36.16■■■■□ 3.38
CTF1-202ENST00000395019 MAGI2Q86UL8 1455 aa36.16■■■■□ 3.38
CTF1-202ENST00000395019 NCOA1Q15788 1441 aa36.15■■■■□ 3.38
CTF1-202ENST00000395019 SIGLEC1Q9BZZ2 1709 aa36.12■■■■□ 3.37
CTF1-202ENST00000395019 ANKRD30AQ9BXX3 1397 aa36.09■■■■□ 3.37
CTF1-202ENST00000395019 KIF15Q9NS87 1388 aa36.07■■■■□ 3.37
CTF1-202ENST00000395019 ACIN1Q9UKV3 1341 aaKnown RBP36.07■■■■□ 3.36
CTF1-202ENST00000395019 ATP10AO60312 1499 aa36.02■■■■□ 3.36
CTF1-202ENST00000395019 A2MP01023 1474 aa36.01■■■■□ 3.35
CTF1-202ENST00000395019 DUOX2Q9NRD8 1548 aa36■■■■□ 3.35
CTF1-202ENST00000395019 REREQ9P2R6 1566 aa35.96■■■■□ 3.35
CTF1-202ENST00000395019 DHX29Q7Z478 1369 aaKnown RBP35.94■■■■□ 3.34
CTF1-202ENST00000395019 ANKRD50Q9ULJ7 1429 aa35.9■■■■□ 3.34
CTF1-202ENST00000395019 TRIM52Q96A61 297 aa35.89■■■■□ 3.34
CTF1-202ENST00000395019 ERBINQ96RT1 1412 aa35.88■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms