RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 FOXD1Q16676 465 aa16.36■□□□□ 0.21
SLC28A1-203ENST00000394573 TAF7LQ5H9L4 462 aa16.36■□□□□ 0.21
SLC28A1-203ENST00000394573 STAC3Q96MF2 364 aa16.36■□□□□ 0.21
SLC28A1-203ENST00000394573 GOLGA6L3A6NEY3 463 aa16.35■□□□□ 0.21
SLC28A1-203ENST00000394573 FAM13BQ9NYF5 915 aa16.34■□□□□ 0.21
SLC28A1-203ENST00000394573 CANXP27824 592 aaKnown RBP16.34■□□□□ 0.21
SLC28A1-203ENST00000394573 FAM50AQ14320 339 aaKnown RBP16.34■□□□□ 0.21
SLC28A1-203ENST00000394573 ESPNB1AK53 854 aa16.33■□□□□ 0.21
SLC28A1-203ENST00000394573 RRP1P56182 461 aaKnown RBP16.33■□□□□ 0.21
SLC28A1-203ENST00000394573 PLCD3Q8N3E9 789 aa16.33■□□□□ 0.21
SLC28A1-203ENST00000394573 AMER1Q5JTC6 1135 aaPredicted RBP16.32■□□□□ 0.2
SLC28A1-203ENST00000394573 KIAA1211Q6ZU35 1233 aa16.32■□□□□ 0.2
SLC28A1-203ENST00000394573 RAPGEF2Q9Y4G8 1499 aa16.32■□□□□ 0.2
SLC28A1-203ENST00000394573 TPM2P07951 284 aa16.32■□□□□ 0.2
SLC28A1-203ENST00000394573 VGLL3A8MV65 326 aa16.31■□□□□ 0.2
SLC28A1-203ENST00000394573 KLHL34Q8N239 644 aa16.3■□□□□ 0.2
SLC28A1-203ENST00000394573 PLIN1O60240 522 aa16.3■□□□□ 0.2
SLC28A1-203ENST00000394573 CNTLNQ9NXG0 1405 aa16.28■□□□□ 0.2
SLC28A1-203ENST00000394573 RIPK4P57078 832 aa16.25■□□□□ 0.19
SLC28A1-203ENST00000394573 MYH16Q9H6N6 1097 aa16.23■□□□□ 0.19
SLC28A1-203ENST00000394573 C8orf34Q49A92 452 aa16.22■□□□□ 0.19
SLC28A1-203ENST00000394573 TRIM44Q96DX7 344 aaPredicted RBP16.22■□□□□ 0.19
SLC28A1-203ENST00000394573 POLR3GLQ9BT43 218 aa16.22■□□□□ 0.19
SLC28A1-203ENST00000394573 RCAN3Q9UKA8 241 aa16.22■□□□□ 0.19
SLC28A1-203ENST00000394573 FSD2A1L4K1 749 aa16.21■□□□□ 0.19
SLC28A1-203ENST00000394573 SPRYD3Q8NCJ5 442 aa16.21■□□□□ 0.19
SLC28A1-203ENST00000394573 MAPK8IP2Q13387 824 aaPredicted RBP16.2■□□□□ 0.18
SLC28A1-203ENST00000394573 ARAP1Q96P48 1450 aa16.19■□□□□ 0.18
SLC28A1-203ENST00000394573 FAM161AQ3B820 660 aa16.19■□□□□ 0.18
SLC28A1-203ENST00000394573 IPO4Q8TEX9 1081 aaKnown RBP16.19■□□□□ 0.18
SLC28A1-203ENST00000394573 CRBNQ96SW2 442 aa16.19■□□□□ 0.18
SLC28A1-203ENST00000394573 SMAP1Q8IYB5 467 aaPredicted RBP16.19■□□□□ 0.18
SLC28A1-203ENST00000394573 ZNF830Q96NB3 372 aaPredicted RBP16.19■□□□□ 0.18
SLC28A1-203ENST00000394573 EIF4G2P78344 907 aaKnown RBP eCLIP16.18■□□□□ 0.18
SLC28A1-203ENST00000394573 FHAD1B1AJZ9 1412 aa16.18■□□□□ 0.18
SLC28A1-203ENST00000394573 ANP32BQ92688 251 aaKnown RBP16.15■□□□□ 0.18
SLC28A1-203ENST00000394573 PPP4R3BQ5MIZ7 849 aa16.15■□□□□ 0.18
SLC28A1-203ENST00000394573 GRPEL1Q9HAV7 217 aa16.15■□□□□ 0.18
SLC28A1-203ENST00000394573 TMEM51Q9NW97 253 aa16.15■□□□□ 0.18
SLC28A1-203ENST00000394573 R3HCC1Q9Y3T6 440 aaKnown RBP16.15■□□□□ 0.18
SLC28A1-203ENST00000394573 CCDC7Q96M83 1385 aa16.13■□□□□ 0.17
SLC28A1-203ENST00000394573 MRE11P49959 708 aa16.13■□□□□ 0.17
SLC28A1-203ENST00000394573 NCOA2Q15596 1464 aa16.12■□□□□ 0.17
SLC28A1-203ENST00000394573 ZBTB22O15209 634 aa16.12■□□□□ 0.17
SLC28A1-203ENST00000394573 C20orf194Q5TEA3 1177 aa16.1■□□□□ 0.17
SLC28A1-203ENST00000394573 DMTNQ08495 405 aa16.1■□□□□ 0.17
SLC28A1-203ENST00000394573 BAZ1AQ9NRL2 1556 aaPredicted RBP16.1■□□□□ 0.17
SLC28A1-203ENST00000394573 CDCA7LQ96GN5 454 aa16.09■□□□□ 0.17
SLC28A1-203ENST00000394573 TMC1Q8TDI8 760 aa16.09■□□□□ 0.17
SLC28A1-203ENST00000394573 TRAK2O60296 914 aa16.08■□□□□ 0.16
SLC28A1-203ENST00000394573 SEC24BO95487 1268 aa16.07■□□□□ 0.16
SLC28A1-203ENST00000394573 ZSCAN20P17040 1043 aaPredicted RBP16.07■□□□□ 0.16
SLC28A1-203ENST00000394573 MCM4P33991 863 aa16.06■□□□□ 0.16
SLC28A1-203ENST00000394573 MAP7D2Q96T17 732 aa16.06■□□□□ 0.16
SLC28A1-203ENST00000394573 KTN1Q86UP2 1357 aaKnown RBP16.06■□□□□ 0.16
SLC28A1-203ENST00000394573 UQCRHLA0A096LP55 91 aa16.06■□□□□ 0.16
SLC28A1-203ENST00000394573 UQCRHP07919 91 aa16.06■□□□□ 0.16
SLC28A1-203ENST00000394573 PNISRQ8TF01 805 aaKnown RBP16.06■□□□□ 0.16
SLC28A1-203ENST00000394573 KIF7Q2M1P5 1343 aa16.06■□□□□ 0.16
SLC28A1-203ENST00000394573 ANTXR1Q9H6X2 564 aa16.05■□□□□ 0.16
SLC28A1-203ENST00000394573 PHLDB1Q86UU1 1377 aa16.05■□□□□ 0.16
SLC28A1-203ENST00000394573 OFD1O75665 1012 aa16.05■□□□□ 0.16
SLC28A1-203ENST00000394573 BECN1Q14457 450 aa16.04■□□□□ 0.16
SLC28A1-203ENST00000394573 RSPH4AQ5TD94 716 aa16.04■□□□□ 0.16
SLC28A1-203ENST00000394573 USP19O94966 1318 aa16.04■□□□□ 0.16
SLC28A1-203ENST00000394573 ZFP91Q96JP5 570 aaPredicted RBP16.04■□□□□ 0.16
SLC28A1-203ENST00000394573 ZBTB7CA1YPR0 619 aa16.03■□□□□ 0.16
SLC28A1-203ENST00000394573 GAS2L3Q86XJ1 694 aa16.03■□□□□ 0.16
SLC28A1-203ENST00000394573 ERICH3Q5RHP9 1530 aa16.02■□□□□ 0.16
SLC28A1-203ENST00000394573 E9PSI1 815 aa16.02■□□□□ 0.15
SLC28A1-203ENST00000394573 NCLP19338 710 aaKnown RBP16.02■□□□□ 0.15
SLC28A1-203ENST00000394573 DHX37Q8IY37 1157 aaKnown RBP16.02■□□□□ 0.15
SLC28A1-203ENST00000394573 CHMP4AQ9BY43 222 aa16.02■□□□□ 0.15
SLC28A1-203ENST00000394573 KDM2BQ8NHM5 1336 aa16.01■□□□□ 0.15
SLC28A1-203ENST00000394573 IGSF3O75054 1194 aa16.01■□□□□ 0.15
SLC28A1-203ENST00000394573 NCOA1Q15788 1441 aa16.01■□□□□ 0.15
SLC28A1-203ENST00000394573 UTP14CQ5TAP6 766 aaKnown RBP16.01■□□□□ 0.15
SLC28A1-203ENST00000394573 TNNT2P45379 298 aaPredicted RBP16.01■□□□□ 0.15
SLC28A1-203ENST00000394573 CBX1P83916 185 aa16.01■□□□□ 0.15
SLC28A1-203ENST00000394573 PDZRN4Q6ZMN7 1036 aaPredicted RBP16■□□□□ 0.15
SLC28A1-203ENST00000394573 MSNP26038 577 aaKnown RBP16■□□□□ 0.15
SLC28A1-203ENST00000394573 MAP3K1Q13233 1512 aa16■□□□□ 0.15
SLC28A1-203ENST00000394573 KDM5BQ9UGL1 1544 aa16■□□□□ 0.15
SLC28A1-203ENST00000394573 XPCQ01831 940 aaPredicted RBP15.99■□□□□ 0.15
SLC28A1-203ENST00000394573 JARID2Q92833 1246 aaPredicted RBP15.99■□□□□ 0.15
SLC28A1-203ENST00000394573 ATP1B4Q9UN42 357 aaPredicted RBP15.98■□□□□ 0.15
SLC28A1-203ENST00000394573 CENPQQ7L2Z9 268 aaPredicted RBP15.98■□□□□ 0.15
SLC28A1-203ENST00000394573 SYNJ1O43426 1573 aa15.98■□□□□ 0.15
SLC28A1-203ENST00000394573 ZSCAN30Q86W11 494 aa15.97■□□□□ 0.15
SLC28A1-203ENST00000394573 FTSJ3Q8IY81 847 aaKnown RBP15.97■□□□□ 0.15
SLC28A1-203ENST00000394573 TBC1D2Q9BYX2 928 aa15.96■□□□□ 0.15
SLC28A1-203ENST00000394573 CGNQ9P2M7 1197 aaKnown RBP15.96■□□□□ 0.15
SLC28A1-203ENST00000394573 CDK11BP21127 795 aaKnown RBP15.95■□□□□ 0.14
SLC28A1-203ENST00000394573 CERS3Q8IU89 383 aa15.95■□□□□ 0.14
SLC28A1-203ENST00000394573 TSC1Q92574 1164 aa15.94■□□□□ 0.14
SLC28A1-203ENST00000394573 CCDC94Q9BW85 323 aaPredicted RBP15.94■□□□□ 0.14
SLC28A1-203ENST00000394573 ZNF326Q5BKZ1 582 aaKnown RBP15.93■□□□□ 0.14
SLC28A1-203ENST00000394573 DNTTIP2Q5QJE6 756 aaKnown RBP15.92■□□□□ 0.14
SLC28A1-203ENST00000394573 SECISBP2LQ93073 1101 aaKnown RBP15.92■□□□□ 0.14
SLC28A1-203ENST00000394573 L3MBTL2Q969R5 705 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms