RNA–Protein interactions for RNA: ENST00000394221.2

DHFR2-202, Transcript of dihydrofolate reductase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR2, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-202ENST00000394221 PEG3Q9GZU2 1588 aa11.01□□□□□ -0.65
DHFR2-202ENST00000394221 CUX2O14529 1486 aa11□□□□□ -0.65
DHFR2-202ENST00000394221 PRDM10Q9NQV6 1147 aa11□□□□□ -0.65
DHFR2-202ENST00000394221 NCBP3Q53F19 620 aaKnown RBP11□□□□□ -0.65
DHFR2-202ENST00000394221 MTERF4Q7Z6M4 381 aaKnown RBP11□□□□□ -0.65
DHFR2-202ENST00000394221 PANK2Q9BZ23 570 aa11□□□□□ -0.65
DHFR2-202ENST00000394221 CCNB3Q8WWL7 1395 aa10.99□□□□□ -0.65
DHFR2-202ENST00000394221 PLCD3Q8N3E9 789 aa10.99□□□□□ -0.65
DHFR2-202ENST00000394221 SMARCA2P51531 1590 aa10.98□□□□□ -0.65
DHFR2-202ENST00000394221 MRE11P49959 708 aa10.98□□□□□ -0.65
DHFR2-202ENST00000394221 GZF1Q9H116 711 aaPredicted RBP10.98□□□□□ -0.65
DHFR2-202ENST00000394221 BECN1Q14457 450 aa10.97□□□□□ -0.65
DHFR2-202ENST00000394221 UTP14CQ5TAP6 766 aaKnown RBP10.97□□□□□ -0.65
DHFR2-202ENST00000394221 PPP4R3BQ5MIZ7 849 aa10.97□□□□□ -0.65
DHFR2-202ENST00000394221 PRKRIP1Q9H875 184 aaPredicted RBP10.97□□□□□ -0.65
DHFR2-202ENST00000394221 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.96□□□□□ -0.65
DHFR2-202ENST00000394221 FTSJ3Q8IY81 847 aaKnown RBP10.96□□□□□ -0.65
DHFR2-202ENST00000394221 RRBP1Q9P2E9 1410 aaKnown RBP10.96□□□□□ -0.65
DHFR2-202ENST00000394221 RRP1P56182 461 aaKnown RBP10.96□□□□□ -0.66
DHFR2-202ENST00000394221 BRD2P25440 801 aaKnown RBP10.95□□□□□ -0.66
DHFR2-202ENST00000394221 AMER1Q5JTC6 1135 aaPredicted RBP10.95□□□□□ -0.66
DHFR2-202ENST00000394221 SETD5Q9C0A6 1442 aa10.95□□□□□ -0.66
DHFR2-202ENST00000394221 SLKQ9H2G2 1235 aaPredicted RBP10.95□□□□□ -0.66
DHFR2-202ENST00000394221 VGLL3A8MV65 326 aa10.94□□□□□ -0.66
DHFR2-202ENST00000394221 DMTNQ08495 405 aa10.94□□□□□ -0.66
DHFR2-202ENST00000394221 FAM161AQ3B820 660 aa10.94□□□□□ -0.66
DHFR2-202ENST00000394221 KANK4Q5T7N3 995 aaPredicted RBP10.93□□□□□ -0.66
DHFR2-202ENST00000394221 RUSC2Q8N2Y8 1516 aa10.93□□□□□ -0.66
DHFR2-202ENST00000394221 MSNP26038 577 aaKnown RBP10.93□□□□□ -0.66
DHFR2-202ENST00000394221 DNTTIP2Q5QJE6 756 aaKnown RBP10.92□□□□□ -0.66
DHFR2-202ENST00000394221 CNTLNQ9NXG0 1405 aa10.92□□□□□ -0.66
DHFR2-202ENST00000394221 FSD2A1L4K1 749 aa10.92□□□□□ -0.66
DHFR2-202ENST00000394221 ZFP91Q96JP5 570 aaPredicted RBP10.92□□□□□ -0.66
DHFR2-202ENST00000394221 GRPEL1Q9HAV7 217 aa10.91□□□□□ -0.66
DHFR2-202ENST00000394221 ERBB4Q15303 1308 aa10.91□□□□□ -0.66
DHFR2-202ENST00000394221 CECR2Q9BXF3 1484 aa10.91□□□□□ -0.66
DHFR2-202ENST00000394221 SENP3-EIF4A1A0A087X0R7 540 aa10.9□□□□□ -0.66
DHFR2-202ENST00000394221 TERF1P54274 439 aa10.9□□□□□ -0.66
DHFR2-202ENST00000394221 R3HCC1Q9Y3T6 440 aaKnown RBP10.9□□□□□ -0.66
DHFR2-202ENST00000394221 RIPK4P57078 832 aa10.9□□□□□ -0.66
DHFR2-202ENST00000394221 DHX37Q8IY37 1157 aaKnown RBP10.9□□□□□ -0.66
DHFR2-202ENST00000394221 TMEM51Q9NW97 253 aa10.9□□□□□ -0.66
DHFR2-202ENST00000394221 KIF20AO95235 890 aa10.9□□□□□ -0.67
DHFR2-202ENST00000394221 ZNF830Q96NB3 372 aaPredicted RBP10.9□□□□□ -0.67
DHFR2-202ENST00000394221 OFD1O75665 1012 aa10.89□□□□□ -0.67
DHFR2-202ENST00000394221 RCAN3Q9UKA8 241 aa10.89□□□□□ -0.67
DHFR2-202ENST00000394221 HSPA5P11021 654 aaKnown RBP10.89□□□□□ -0.67
DHFR2-202ENST00000394221 TAF3Q5VWG9 929 aa10.89□□□□□ -0.67
DHFR2-202ENST00000394221 SKAP1Q86WV1 359 aa10.88□□□□□ -0.67
DHFR2-202ENST00000394221 GTPBP4Q9BZE4 634 aaKnown RBP10.88□□□□□ -0.67
DHFR2-202ENST00000394221 UQCRHLA0A096LP55 91 aa10.87□□□□□ -0.67
DHFR2-202ENST00000394221 UQCRHP07919 91 aa10.87□□□□□ -0.67
DHFR2-202ENST00000394221 EIF4G2P78344 907 aaKnown RBP eCLIP10.87□□□□□ -0.67
DHFR2-202ENST00000394221 ISY1Q9ULR0 285 aaKnown RBP10.87□□□□□ -0.67
DHFR2-202ENST00000394221 LETM1O95202 739 aaPredicted RBP10.87□□□□□ -0.67
DHFR2-202ENST00000394221 FHAD1B1AJZ9 1412 aa10.87□□□□□ -0.67
DHFR2-202ENST00000394221 KIF21BO75037 1637 aa10.86□□□□□ -0.67
DHFR2-202ENST00000394221 TEX2Q8IWB9 1127 aa10.86□□□□□ -0.67
DHFR2-202ENST00000394221 CCDC94Q9BW85 323 aaPredicted RBP10.86□□□□□ -0.67
DHFR2-202ENST00000394221 KTN1Q86UP2 1357 aaKnown RBP10.85□□□□□ -0.67
DHFR2-202ENST00000394221 ZSCAN30Q86W11 494 aa10.85□□□□□ -0.67
DHFR2-202ENST00000394221 FAM50AQ14320 339 aaKnown RBP10.85□□□□□ -0.67
DHFR2-202ENST00000394221 TRAK2O60296 914 aa10.85□□□□□ -0.67
DHFR2-202ENST00000394221 DYNC1I1O14576 645 aa10.84□□□□□ -0.67
DHFR2-202ENST00000394221 CHMP4AQ9BY43 222 aa10.84□□□□□ -0.67
DHFR2-202ENST00000394221 MCM4P33991 863 aa10.84□□□□□ -0.67
DHFR2-202ENST00000394221 IRX3P78415 501 aaPredicted RBP10.84□□□□□ -0.67
DHFR2-202ENST00000394221 FOXD1Q16676 465 aa10.83□□□□□ -0.68
DHFR2-202ENST00000394221 FBLN2P98095 1184 aa10.83□□□□□ -0.68
DHFR2-202ENST00000394221 ZSCAN20P17040 1043 aaPredicted RBP10.82□□□□□ -0.68
DHFR2-202ENST00000394221 SECISBP2LQ93073 1101 aaKnown RBP10.82□□□□□ -0.68
DHFR2-202ENST00000394221 C8orf34Q49A92 452 aa10.82□□□□□ -0.68
DHFR2-202ENST00000394221 CCDC173Q0VFZ6 552 aa10.81□□□□□ -0.68
DHFR2-202ENST00000394221 CENPQQ7L2Z9 268 aaPredicted RBP10.81□□□□□ -0.68
DHFR2-202ENST00000394221 CGNQ9P2M7 1197 aaKnown RBP10.81□□□□□ -0.68
DHFR2-202ENST00000394221 TMC1Q8TDI8 760 aa10.81□□□□□ -0.68
DHFR2-202ENST00000394221 EIF4G1Q04637 1599 aaKnown RBP10.8□□□□□ -0.68
DHFR2-202ENST00000394221 CRBNQ96SW2 442 aa10.8□□□□□ -0.68
DHFR2-202ENST00000394221 PHF23Q9BUL5 403 aaPredicted RBP10.8□□□□□ -0.68
DHFR2-202ENST00000394221 UPF2Q9HAU5 1272 aaKnown RBP10.8□□□□□ -0.68
DHFR2-202ENST00000394221 MAPK8IP2Q13387 824 aaPredicted RBP10.8□□□□□ -0.68
DHFR2-202ENST00000394221 DDX11L8A8MPP1 907 aa10.79□□□□□ -0.68
DHFR2-202ENST00000394221 NCOA2Q15596 1464 aa10.79□□□□□ -0.68
DHFR2-202ENST00000394221 E9PSI1 815 aa10.78□□□□□ -0.68
DHFR2-202ENST00000394221 CBX1P83916 185 aa10.78□□□□□ -0.68
DHFR2-202ENST00000394221 CSPP1Q1MSJ5 1256 aa10.78□□□□□ -0.68
DHFR2-202ENST00000394221 CCDC7Q96M83 1385 aa10.78□□□□□ -0.68
DHFR2-202ENST00000394221 POLR3GLQ9BT43 218 aa10.77□□□□□ -0.69
DHFR2-202ENST00000394221 ZNF771Q7L3S4 317 aaPredicted RBP10.76□□□□□ -0.69
DHFR2-202ENST00000394221 SPRYD3Q8NCJ5 442 aa10.76□□□□□ -0.69
DHFR2-202ENST00000394221 PLIN1O60240 522 aa10.76□□□□□ -0.69
DHFR2-202ENST00000394221 SASS6Q6UVJ0 657 aa10.75□□□□□ -0.69
DHFR2-202ENST00000394221 ERICH3Q5RHP9 1530 aa10.75□□□□□ -0.69
DHFR2-202ENST00000394221 CHMP5Q9NZZ3 219 aa10.74□□□□□ -0.69
DHFR2-202ENST00000394221 NASPP49321 788 aaPredicted RBP10.74□□□□□ -0.69
DHFR2-202ENST00000394221 HAP1P54257 671 aaPredicted RBP10.74□□□□□ -0.69
DHFR2-202ENST00000394221 MROH2BQ7Z745 1585 aa10.74□□□□□ -0.69
DHFR2-202ENST00000394221 VGFO15240 615 aaPredicted RBP10.73□□□□□ -0.69
DHFR2-202ENST00000394221 DNAJC2Q99543 621 aaKnown RBP10.73□□□□□ -0.69
DHFR2-202ENST00000394221 XPCQ01831 940 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms