RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 MAGI3Q5TCQ9 1506 aa30.06■■■□□ 2.4
CLDND1-202ENST00000394180 ATP10BO94823 1461 aa30■■■□□ 2.39
CLDND1-202ENST00000394180 RAB3GAP2Q9H2M9 1393 aa30■■■□□ 2.39
CLDND1-202ENST00000394180 ARHGEF11O15085 1522 aa29.97■■■□□ 2.39
CLDND1-202ENST00000394180 ABCC2Q92887 1545 aa29.97■■■□□ 2.39
CLDND1-202ENST00000394180 UBE2Q2Q8WVN8 375 aa29.95■■■□□ 2.38
CLDND1-202ENST00000394180 PHLDB1Q86UU1 1377 aa29.93■■■□□ 2.38
CLDND1-202ENST00000394180 EHBP1L1Q8N3D4 1523 aa29.93■■■□□ 2.38
CLDND1-202ENST00000394180 SETD5Q9C0A6 1442 aa29.92■■■□□ 2.38
CLDND1-202ENST00000394180 ADCY10Q96PN6 1610 aa29.87■■■□□ 2.37
CLDND1-202ENST00000394180 UHRF1BP1LA0JNW5 1464 aa29.87■■■□□ 2.37
CLDND1-202ENST00000394180 NCOA2Q15596 1464 aa29.87■■■□□ 2.37
CLDND1-202ENST00000394180 PLEKHD1A6NEE1 506 aa29.84■■■□□ 2.37
CLDND1-202ENST00000394180 SUPT6HQ7KZ85 1726 aaKnown RBP29.84■■■□□ 2.37
CLDND1-202ENST00000394180 SALL2Q9Y467 1007 aaPredicted RBP29.84■■■□□ 2.37
CLDND1-202ENST00000394180 RIMBP3CA6NJZ7 1639 aa29.84■■■□□ 2.37
CLDND1-202ENST00000394180 RIMBP3BA6NNM3 1639 aa29.84■■■□□ 2.37
CLDND1-202ENST00000394180 RIMBP3Q9UFD9 1639 aa29.84■■■□□ 2.37
CLDND1-202ENST00000394180 RTL5Q5HYW3 569 aaPredicted RBP29.83■■■□□ 2.37
CLDND1-202ENST00000394180 TROQ12816 1431 aaPredicted RBP29.82■■■□□ 2.36
CLDND1-202ENST00000394180 CYB5RLQ6IPT4 315 aa29.8■■■□□ 2.36
CLDND1-202ENST00000394180 KDM5BQ9UGL1 1544 aa29.79■■■□□ 2.36
CLDND1-202ENST00000394180 ZCCHC11Q5TAX3 1644 aaKnown RBP29.79■■■□□ 2.36
CLDND1-202ENST00000394180 KIF14Q15058 1648 aa29.76■■■□□ 2.35
CLDND1-202ENST00000394180 HNRNPUQ00839 825 aaKnown RBP eCLIP29.75■■■□□ 2.35
CLDND1-202ENST00000394180 IPO9Q96P70 1041 aaKnown RBP29.74■■■□□ 2.35
CLDND1-202ENST00000394180 WASHC2AQ641Q2 1341 aa29.72■■■□□ 2.35
CLDND1-202ENST00000394180 C11orf95C9JLR9 678 aaPredicted RBP29.72■■■□□ 2.35
CLDND1-202ENST00000394180 USP35Q9P2H5 1018 aa29.71■■■□□ 2.35
CLDND1-202ENST00000394180 MYOM3Q5VTT5 1437 aa29.7■■■□□ 2.35
CLDND1-202ENST00000394180 NBR1Q14596 966 aa29.69■■■□□ 2.34
CLDND1-202ENST00000394180 ANP32AP39687 249 aaKnown RBP29.69■■■□□ 2.34
CLDND1-202ENST00000394180 PAK3O75914 559 aaPredicted RBP29.68■■■□□ 2.34
CLDND1-202ENST00000394180 FAM50AQ14320 339 aaKnown RBP29.68■■■□□ 2.34
CLDND1-202ENST00000394180 FGD6Q6ZV73 1430 aa29.68■■■□□ 2.34
CLDND1-202ENST00000394180 NPM1P06748 294 aaKnown RBP eCLIP29.62■■■□□ 2.33
CLDND1-202ENST00000394180 ZBTB47Q9UFB7 747 aaPredicted RBP29.6■■■□□ 2.33
CLDND1-202ENST00000394180 IRX6P78412 446 aaPredicted RBP29.6■■■□□ 2.33
CLDND1-202ENST00000394180 ABCC10Q5T3U5 1492 aa29.59■■■□□ 2.33
CLDND1-202ENST00000394180 SIN3AQ96ST3 1273 aa29.59■■■□□ 2.33
CLDND1-202ENST00000394180 GPATCH8Q9UKJ3 1502 aaKnown RBP29.57■■■□□ 2.32
CLDND1-202ENST00000394180 ASXL2Q76L83 1435 aa29.57■■■□□ 2.32
CLDND1-202ENST00000394180 WASHC2CQ9Y4E1 1318 aa29.56■■■□□ 2.32
CLDND1-202ENST00000394180 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.55■■■□□ 2.32
CLDND1-202ENST00000394180 ZBED9Q6R2W3 1325 aa29.55■■■□□ 2.32
CLDND1-202ENST00000394180 WDR7Q9Y4E6 1490 aa29.55■■■□□ 2.32
CLDND1-202ENST00000394180 PTPN23Q9H3S7 1636 aa29.54■■■□□ 2.32
CLDND1-202ENST00000394180 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.54■■■□□ 2.32
CLDND1-202ENST00000394180 ZNF644Q9H582 1327 aaPredicted RBP29.53■■■□□ 2.32
CLDND1-202ENST00000394180 TTC37Q6PGP7 1564 aa29.53■■■□□ 2.32
CLDND1-202ENST00000394180 CCDC136Q96JN2 1154 aa29.52■■■□□ 2.32
CLDND1-202ENST00000394180 CFDP1Q9UEE9 299 aaPredicted RBP29.52■■■□□ 2.32
CLDND1-202ENST00000394180 IL27Q8NEV9 243 aa29.52■■■□□ 2.32
CLDND1-202ENST00000394180 MIA2Q96PC5 1412 aa29.51■■■□□ 2.31
CLDND1-202ENST00000394180 CDC42BPAQ5VT25 1732 aa29.5■■■□□ 2.31
CLDND1-202ENST00000394180 ZNF777Q9ULD5 760 aaPredicted RBP29.5■■■□□ 2.31
CLDND1-202ENST00000394180 B4GALNT3Q6L9W6 998 aa29.49■■■□□ 2.31
CLDND1-202ENST00000394180 ITSN2Q9NZM3 1697 aa29.46■■■□□ 2.31
CLDND1-202ENST00000394180 TCOF1Q13428 1488 aaKnown RBP29.45■■■□□ 2.31
CLDND1-202ENST00000394180 TONSLQ96HA7 1378 aa29.45■■■□□ 2.3
CLDND1-202ENST00000394180 RNF123Q5XPI4 1314 aa29.41■■■□□ 2.3
CLDND1-202ENST00000394180 CDC42BPBQ9Y5S2 1711 aa29.4■■■□□ 2.3
CLDND1-202ENST00000394180 PTPRKQ15262 1439 aa29.4■■■□□ 2.3
CLDND1-202ENST00000394180 CAMSAP2Q08AD1 1489 aa29.39■■■□□ 2.3
CLDND1-202ENST00000394180 PREX2Q70Z35 1606 aa29.38■■■□□ 2.29
CLDND1-202ENST00000394180 SMG6Q86US8 1419 aaKnown RBP29.37■■■□□ 2.29
CLDND1-202ENST00000394180 PPM1GO15355 546 aaPredicted RBP29.36■■■□□ 2.29
CLDND1-202ENST00000394180 MYO5CQ9NQX4 1742 aa29.36■■■□□ 2.29
CLDND1-202ENST00000394180 HIRIP3Q9BW71 556 aaPredicted RBP29.35■■■□□ 2.29
CLDND1-202ENST00000394180 ARHGAP5Q13017 1502 aa29.35■■■□□ 2.29
CLDND1-202ENST00000394180 CNTLNQ9NXG0 1405 aa29.35■■■□□ 2.29
CLDND1-202ENST00000394180 CHIC2Q9UKJ5 165 aa29.33■■■□□ 2.29
CLDND1-202ENST00000394180 PLCH2O75038 1416 aa29.33■■■□□ 2.29
CLDND1-202ENST00000394180 ABCA9Q8IUA7 1624 aa29.31■■■□□ 2.28
CLDND1-202ENST00000394180 SAMD9LQ8IVG5 1584 aa29.29■■■□□ 2.28
CLDND1-202ENST00000394180 HNRNPMP52272 730 aaKnown RBP eCLIP29.28■■■□□ 2.28
CLDND1-202ENST00000394180 ABCC5O15440 1437 aa29.27■■■□□ 2.28
CLDND1-202ENST00000394180 DAPK1P53355 1430 aa29.27■■■□□ 2.28
CLDND1-202ENST00000394180 DNAJC5Q9H3Z4 198 aa29.25■■■□□ 2.27
CLDND1-202ENST00000394180 DNMT1P26358 1616 aaKnown RBP29.24■■■□□ 2.27
CLDND1-202ENST00000394180 EFCAB2Q5VUJ9 269 aa29.22■■■□□ 2.27
CLDND1-202ENST00000394180 RRP7BPQ9NSQ0 103 aa29.2■■■□□ 2.27
CLDND1-202ENST00000394180 CD109Q6YHK3 1445 aa29.2■■■□□ 2.26
CLDND1-202ENST00000394180 NEFMP07197 916 aa29.2■■■□□ 2.26
CLDND1-202ENST00000394180 SYCP2Q9BX26 1530 aa29.19■■■□□ 2.26
CLDND1-202ENST00000394180 RTN4Q9NQC3 1192 aaKnown RBP29.19■■■□□ 2.26
CLDND1-202ENST00000394180 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.19■■■□□ 2.26
CLDND1-202ENST00000394180 MBD5Q9P267 1494 aa29.19■■■□□ 2.26
CLDND1-202ENST00000394180 RSPH6AQ9H0K4 717 aa29.18■■■□□ 2.26
CLDND1-202ENST00000394180 PRKRIP1Q9H875 184 aaPredicted RBP29.18■■■□□ 2.26
CLDND1-202ENST00000394180 FANCAO15360 1455 aa29.18■■■□□ 2.26
CLDND1-202ENST00000394180 FAM69CQ0P6D2 419 aa29.16■■■□□ 2.26
CLDND1-202ENST00000394180 ARHGEF12Q9NZN5 1544 aa29.16■■■□□ 2.26
CLDND1-202ENST00000394180 TCERG1O14776 1098 aaKnown RBP29.16■■■□□ 2.26
CLDND1-202ENST00000394180 ARAP3Q8WWN8 1544 aa29.15■■■□□ 2.26
CLDND1-202ENST00000394180 NUDCQ9Y266 331 aa29.13■■■□□ 2.25
CLDND1-202ENST00000394180 HFM1A2PYH4 1435 aa29.13■■■□□ 2.25
CLDND1-202ENST00000394180 MS4A1P11836 297 aa29.12■■■□□ 2.25
CLDND1-202ENST00000394180 DIP2BQ9P265 1576 aa29.12■■■□□ 2.25
CLDND1-202ENST00000394180 NAIPQ13075 1403 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms