RNA–Protein interactions for RNA: ENST00000393655.3

TFAP2B-202, Transcript of transcription factor AP-2 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFAP2B, Length 5,773 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2B-202ENST00000393655 GOLGA6L4A6NEF3 574 aa20.63■□□□□ 0.89
TFAP2B-202ENST00000393655 CLSTN1O94985 981 aa20.62■□□□□ 0.89
TFAP2B-202ENST00000393655 CALD1Q05682 793 aaKnown RBP20.62■□□□□ 0.89
TFAP2B-202ENST00000393655 PPP4R2Q9NY27 417 aa20.62■□□□□ 0.89
TFAP2B-202ENST00000393655 CHMP4AQ9BY43 222 aa20.61■□□□□ 0.89
TFAP2B-202ENST00000393655 PLCB2Q00722 1185 aa20.61■□□□□ 0.89
TFAP2B-202ENST00000393655 PDS5BQ9NTI5 1447 aa20.6■□□□□ 0.89
TFAP2B-202ENST00000393655 EFCAB2Q5VUJ9 269 aa20.59■□□□□ 0.89
TFAP2B-202ENST00000393655 ARHGAP35Q9NRY4 1499 aa20.58■□□□□ 0.88
TFAP2B-202ENST00000393655 TIMELESSQ9UNS1 1208 aa20.57■□□□□ 0.88
TFAP2B-202ENST00000393655 IPO8O15397 1037 aaKnown RBP20.57■□□□□ 0.88
TFAP2B-202ENST00000393655 HSCBQ8IWL3 235 aa20.57■□□□□ 0.88
TFAP2B-202ENST00000393655 CCDC9Q9Y3X0 531 aaKnown RBP20.56■□□□□ 0.88
TFAP2B-202ENST00000393655 EID1Q9Y6B2 187 aa20.55■□□□□ 0.88
TFAP2B-202ENST00000393655 GNL2Q13823 731 aaKnown RBP20.54■□□□□ 0.88
TFAP2B-202ENST00000393655 KTN1Q86UP2 1357 aaKnown RBP20.54■□□□□ 0.88
TFAP2B-202ENST00000393655 PKD2Q13563 968 aa20.53■□□□□ 0.88
TFAP2B-202ENST00000393655 EIF3AQ14152 1382 aaKnown RBP20.53■□□□□ 0.88
TFAP2B-202ENST00000393655 ZNF330Q9Y3S2 320 aaPredicted RBP20.52■□□□□ 0.88
TFAP2B-202ENST00000393655 KIAA1211Q6ZU35 1233 aa20.51■□□□□ 0.87
TFAP2B-202ENST00000393655 SPAG9O60271 1321 aaKnown RBP20.48■□□□□ 0.87
TFAP2B-202ENST00000393655 SETD5Q9C0A6 1442 aa20.48■□□□□ 0.87
TFAP2B-202ENST00000393655 ANKRD30AQ9BXX3 1397 aa20.48■□□□□ 0.87
TFAP2B-202ENST00000393655 L1TD1Q5T7N2 865 aaKnown RBP20.48■□□□□ 0.87
TFAP2B-202ENST00000393655 HDAC5Q9UQL6 1122 aa20.47■□□□□ 0.87
TFAP2B-202ENST00000393655 ROCK2O75116 1388 aaKnown RBP20.47■□□□□ 0.87
TFAP2B-202ENST00000393655 ERICH6BQ5W0A0 696 aa20.46■□□□□ 0.87
TFAP2B-202ENST00000393655 SOGA1O94964 1423 aa20.45■□□□□ 0.86
TFAP2B-202ENST00000393655 U2AF1L5P0DN76 240 aaPredicted RBP20.45■□□□□ 0.86
TFAP2B-202ENST00000393655 U2AF1Q01081 240 aaKnown RBP eCLIP20.45■□□□□ 0.86
TFAP2B-202ENST00000393655 STK31Q9BXU1 1019 aa20.44■□□□□ 0.86
TFAP2B-202ENST00000393655 TERF2IPQ9NYB0 399 aa20.43■□□□□ 0.86
TFAP2B-202ENST00000393655 FMN1Q68DA7 1419 aa20.43■□□□□ 0.86
TFAP2B-202ENST00000393655 GORABQ5T7V8 394 aa20.43■□□□□ 0.86
TFAP2B-202ENST00000393655 G3V3G9 751 aa20.42■□□□□ 0.86
TFAP2B-202ENST00000393655 DCAF8Q5TAQ9 597 aa20.42■□□□□ 0.86
TFAP2B-202ENST00000393655 TAF7LQ5H9L4 462 aa20.42■□□□□ 0.86
TFAP2B-202ENST00000393655 NUP155O75694 1391 aa20.42■□□□□ 0.86
TFAP2B-202ENST00000393655 HSPA5P11021 654 aaKnown RBP20.42■□□□□ 0.86
TFAP2B-202ENST00000393655 GPATCH3Q96I76 525 aa20.41■□□□□ 0.86
TFAP2B-202ENST00000393655 SMARCA2P51531 1590 aa20.41■□□□□ 0.86
TFAP2B-202ENST00000393655 KIF3BO15066 747 aa20.4■□□□□ 0.86
TFAP2B-202ENST00000393655 NCBP3Q53F19 620 aaKnown RBP20.4■□□□□ 0.86
TFAP2B-202ENST00000393655 CHAF1AQ13111 956 aaPredicted RBP20.4■□□□□ 0.86
TFAP2B-202ENST00000393655 NGDNQ8NEJ9 315 aaKnown RBP20.4■□□□□ 0.86
TFAP2B-202ENST00000393655 APBB1O00213 710 aa20.39■□□□□ 0.85
TFAP2B-202ENST00000393655 KIAA2012Q0VF49 1180 aa20.39■□□□□ 0.85
TFAP2B-202ENST00000393655 RALBP1Q15311 655 aa20.38■□□□□ 0.85
TFAP2B-202ENST00000393655 HTATSF1O43719 755 aaKnown RBP20.38■□□□□ 0.85
TFAP2B-202ENST00000393655 DRC7Q8IY82 874 aa20.37■□□□□ 0.85
TFAP2B-202ENST00000393655 CCER2I3L3R5 266 aa20.37■□□□□ 0.85
TFAP2B-202ENST00000393655 CHMP3Q9Y3E7 222 aa20.37■□□□□ 0.85
TFAP2B-202ENST00000393655 RSPH4AQ5TD94 716 aa20.37■□□□□ 0.85
TFAP2B-202ENST00000393655 WASHC2CQ9Y4E1 1318 aa20.37■□□□□ 0.85
TFAP2B-202ENST00000393655 NOP58Q9Y2X3 529 aaKnown RBP20.36■□□□□ 0.85
TFAP2B-202ENST00000393655 ITPRIPQ8IWB1 547 aa20.36■□□□□ 0.85
TFAP2B-202ENST00000393655 MYO15BQ96JP2 1530 aa20.36■□□□□ 0.85
TFAP2B-202ENST00000393655 RWDD1Q9H446 243 aaPredicted RBP20.36■□□□□ 0.85
TFAP2B-202ENST00000393655 LMOD3Q0VAK6 560 aa20.34■□□□□ 0.85
TFAP2B-202ENST00000393655 AMPHP49418 695 aa20.33■□□□□ 0.84
TFAP2B-202ENST00000393655 NAP1L5Q96NT1 182 aaPredicted RBP20.33■□□□□ 0.84
TFAP2B-202ENST00000393655 MPHOSPH9Q99550 1183 aa20.33■□□□□ 0.84
TFAP2B-202ENST00000393655 CECR2Q9BXF3 1484 aa20.33■□□□□ 0.84
TFAP2B-202ENST00000393655 PTMSP20962 102 aa20.33■□□□□ 0.84
TFAP2B-202ENST00000393655 TDRD9Q8NDG6 1382 aaKnown RBP20.33■□□□□ 0.84
TFAP2B-202ENST00000393655 HMMRO75330 724 aa20.32■□□□□ 0.84
TFAP2B-202ENST00000393655 B4GALNT3Q6L9W6 998 aa20.31■□□□□ 0.84
TFAP2B-202ENST00000393655 VPS8Q8N3P4 1428 aa20.31■□□□□ 0.84
TFAP2B-202ENST00000393655 FOXD1Q16676 465 aa20.3■□□□□ 0.84
TFAP2B-202ENST00000393655 CCDC34Q96HJ3 373 aa20.3■□□□□ 0.84
TFAP2B-202ENST00000393655 GTF2E1P29083 439 aaPredicted RBP20.29■□□□□ 0.84
TFAP2B-202ENST00000393655 HNRNPMP52272 730 aaKnown RBP eCLIP20.27■□□□□ 0.84
TFAP2B-202ENST00000393655 PMFBP1Q8TBY8 1022 aa20.27■□□□□ 0.84
TFAP2B-202ENST00000393655 MSNP26038 577 aaKnown RBP20.26■□□□□ 0.83
TFAP2B-202ENST00000393655 CCDC18Q5T9S5 1454 aa20.26■□□□□ 0.83
TFAP2B-202ENST00000393655 TPM4P67936 248 aa20.25■□□□□ 0.83
TFAP2B-202ENST00000393655 HSP90B1P14625 803 aaKnown RBP20.25■□□□□ 0.83
TFAP2B-202ENST00000393655 SPRYD3Q8NCJ5 442 aa20.24■□□□□ 0.83
TFAP2B-202ENST00000393655 GBP4Q96PP9 640 aa20.24■□□□□ 0.83
TFAP2B-202ENST00000393655 SMC4Q9NTJ3 1288 aa20.24■□□□□ 0.83
TFAP2B-202ENST00000393655 CCDC88BA6NC98 1476 aa20.23■□□□□ 0.83
TFAP2B-202ENST00000393655 FRAT2O75474 233 aaPredicted RBP20.23■□□□□ 0.83
TFAP2B-202ENST00000393655 RCAN3Q9UKA8 241 aa20.23■□□□□ 0.83
TFAP2B-202ENST00000393655 NUTM2DQ5VT03 806 aaPredicted RBP20.22■□□□□ 0.83
TFAP2B-202ENST00000393655 LTV1Q96GA3 475 aaPredicted RBP20.21■□□□□ 0.83
TFAP2B-202ENST00000393655 TRIM6-TRIM34B2RNG4 842 aa20.21■□□□□ 0.83
TFAP2B-202ENST00000393655 SYAP1Q96A49 352 aaPredicted RBP20.2■□□□□ 0.82
TFAP2B-202ENST00000393655 UACAQ9BZF9 1416 aa20.2■□□□□ 0.82
TFAP2B-202ENST00000393655 SLC4A10Q6U841 1118 aa20.2■□□□□ 0.82
TFAP2B-202ENST00000393655 EVA1CP58658 441 aa20.19■□□□□ 0.82
TFAP2B-202ENST00000393655 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.18■□□□□ 0.82
TFAP2B-202ENST00000393655 RASSF8Q8NHQ8 419 aa20.18■□□□□ 0.82
TFAP2B-202ENST00000393655 CSPP1Q1MSJ5 1256 aa20.17■□□□□ 0.82
TFAP2B-202ENST00000393655 NOC3LQ8WTT2 800 aaKnown RBP20.17■□□□□ 0.82
TFAP2B-202ENST00000393655 C1orf141Q5JVX7 400 aa20.17■□□□□ 0.82
TFAP2B-202ENST00000393655 KANK4Q5T7N3 995 aaPredicted RBP20.16■□□□□ 0.82
TFAP2B-202ENST00000393655 RAB3GAP2Q9H2M9 1393 aa20.15■□□□□ 0.82
TFAP2B-202ENST00000393655 TOMM22Q9NS69 142 aa20.15■□□□□ 0.82
TFAP2B-202ENST00000393655 RAPGEF2Q9Y4G8 1499 aa20.15■□□□□ 0.82
TFAP2B-202ENST00000393655 JPH4Q96JJ6 628 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms