RNA–Protein interactions for RNA: ENST00000393409.2

PLXNA1-201, Transcript of plexin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA1, Length 9,066 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA1-201ENST00000393409 PLEKHD1A6NEE1 506 aa16.47■□□□□ 0.23
PLXNA1-201ENST00000393409 DDX11L8A8MPP1 907 aa16.47■□□□□ 0.23
PLXNA1-201ENST00000393409 IPO8O15397 1037 aaKnown RBP16.47■□□□□ 0.23
PLXNA1-201ENST00000393409 NEUROD2Q15784 382 aa16.47■□□□□ 0.23
PLXNA1-201ENST00000393409 PHLDB1Q86UU1 1377 aa16.47■□□□□ 0.23
PLXNA1-201ENST00000393409 FANCIQ9NVI1 1328 aa16.47■□□□□ 0.23
PLXNA1-201ENST00000393409 RWDD1Q9H446 243 aaPredicted RBP16.46■□□□□ 0.23
PLXNA1-201ENST00000393409 HTATSF1O43719 755 aaKnown RBP16.46■□□□□ 0.23
PLXNA1-201ENST00000393409 RGL3Q3MIN7 710 aa16.45■□□□□ 0.22
PLXNA1-201ENST00000393409 OS9Q13438 667 aaPredicted RBP16.45■□□□□ 0.22
PLXNA1-201ENST00000393409 PMFBP1Q8TBY8 1022 aa16.45■□□□□ 0.22
PLXNA1-201ENST00000393409 SPRYD3Q8NCJ5 442 aa16.44■□□□□ 0.22
PLXNA1-201ENST00000393409 GZF1Q9H116 711 aaPredicted RBP16.44■□□□□ 0.22
PLXNA1-201ENST00000393409 CSPP1Q1MSJ5 1256 aa16.44■□□□□ 0.22
PLXNA1-201ENST00000393409 ROCK2O75116 1388 aaKnown RBP16.43■□□□□ 0.22
PLXNA1-201ENST00000393409 GOLGA6L1Q8N7Z2 621 aa16.42■□□□□ 0.22
PLXNA1-201ENST00000393409 SLKQ9H2G2 1235 aaPredicted RBP16.42■□□□□ 0.22
PLXNA1-201ENST00000393409 GSE1Q14687 1217 aa16.42■□□□□ 0.22
PLXNA1-201ENST00000393409 SENP3-EIF4A1A0A087X0R7 540 aa16.41■□□□□ 0.22
PLXNA1-201ENST00000393409 PDE3BQ13370 1112 aa16.4■□□□□ 0.22
PLXNA1-201ENST00000393409 TPM4P67936 248 aa16.4■□□□□ 0.22
PLXNA1-201ENST00000393409 KIAA1211Q6ZU35 1233 aa16.39■□□□□ 0.22
PLXNA1-201ENST00000393409 CALD1Q05682 793 aaKnown RBP16.39■□□□□ 0.21
PLXNA1-201ENST00000393409 AMER1Q5JTC6 1135 aaPredicted RBP16.38■□□□□ 0.21
PLXNA1-201ENST00000393409 SKOR2Q2VWA4 1001 aaPredicted RBP16.38■□□□□ 0.21
PLXNA1-201ENST00000393409 HSPA5P11021 654 aaKnown RBP16.37■□□□□ 0.21
PLXNA1-201ENST00000393409 EIF3AQ14152 1382 aaKnown RBP16.36■□□□□ 0.21
PLXNA1-201ENST00000393409 KANK1Q14678 1352 aa16.35■□□□□ 0.21
PLXNA1-201ENST00000393409 RAB3GAP2Q9H2M9 1393 aa16.35■□□□□ 0.21
PLXNA1-201ENST00000393409 HDGFP51858 240 aaKnown RBP16.35■□□□□ 0.21
PLXNA1-201ENST00000393409 NAP1L2Q9ULW6 460 aaPredicted RBP16.34■□□□□ 0.21
PLXNA1-201ENST00000393409 U2SURPO15042 1029 aaKnown RBP16.33■□□□□ 0.21
PLXNA1-201ENST00000393409 GNL2Q13823 731 aaKnown RBP16.33■□□□□ 0.21
PLXNA1-201ENST00000393409 ZBTB7CA1YPR0 619 aa16.33■□□□□ 0.2
PLXNA1-201ENST00000393409 DCAF11Q8TEB1 546 aa16.32■□□□□ 0.2
PLXNA1-201ENST00000393409 CCDC34Q96HJ3 373 aa16.32■□□□□ 0.2
PLXNA1-201ENST00000393409 ARID3AQ99856 593 aa16.31■□□□□ 0.2
PLXNA1-201ENST00000393409 SETQ01105 290 aaPredicted RBP16.31■□□□□ 0.2
PLXNA1-201ENST00000393409 ZBED9Q6R2W3 1325 aa16.31■□□□□ 0.2
PLXNA1-201ENST00000393409 CENPQQ7L2Z9 268 aaPredicted RBP16.3■□□□□ 0.2
PLXNA1-201ENST00000393409 KCNH8Q96L42 1107 aa16.3■□□□□ 0.2
PLXNA1-201ENST00000393409 MORC1Q86VD1 984 aa16.3■□□□□ 0.2
PLXNA1-201ENST00000393409 ST18O60284 1047 aa16.3■□□□□ 0.2
PLXNA1-201ENST00000393409 NOC3LQ8WTT2 800 aaKnown RBP16.29■□□□□ 0.2
PLXNA1-201ENST00000393409 NPHP1O15259 732 aa16.29■□□□□ 0.2
PLXNA1-201ENST00000393409 ITPRIPQ8IWB1 547 aa16.29■□□□□ 0.2
PLXNA1-201ENST00000393409 FMN1Q68DA7 1419 aa16.29■□□□□ 0.2
PLXNA1-201ENST00000393409 ABCC8Q09428 1581 aa16.29■□□□□ 0.2
PLXNA1-201ENST00000393409 POGKQ9P215 609 aa16.29■□□□□ 0.2
PLXNA1-201ENST00000393409 FAM161AQ3B820 660 aa16.28■□□□□ 0.2
PLXNA1-201ENST00000393409 KIF15Q9NS87 1388 aa16.28■□□□□ 0.2
PLXNA1-201ENST00000393409 VSIG10Q8N0Z9 540 aa16.27■□□□□ 0.19
PLXNA1-201ENST00000393409 MFAP1P55081 439 aaKnown RBP16.27■□□□□ 0.19
PLXNA1-201ENST00000393409 EIF4G1Q04637 1599 aaKnown RBP16.26■□□□□ 0.19
PLXNA1-201ENST00000393409 GPATCH3Q96I76 525 aa16.26■□□□□ 0.19
PLXNA1-201ENST00000393409 KIF16BQ96L93 1317 aa16.26■□□□□ 0.19
PLXNA1-201ENST00000393409 MTERF4Q7Z6M4 381 aaKnown RBP16.25■□□□□ 0.19
PLXNA1-201ENST00000393409 CHMP4AQ9BY43 222 aa16.25■□□□□ 0.19
PLXNA1-201ENST00000393409 SOGA1O94964 1423 aa16.25■□□□□ 0.19
PLXNA1-201ENST00000393409 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.24■□□□□ 0.19
PLXNA1-201ENST00000393409 NLRP13Q86W25 1043 aa16.24■□□□□ 0.19
PLXNA1-201ENST00000393409 GOLGA2Q08379 1002 aa16.24■□□□□ 0.19
PLXNA1-201ENST00000393409 ATP6V1DQ9Y5K8 247 aa16.23■□□□□ 0.19
PLXNA1-201ENST00000393409 HMMRO75330 724 aa16.22■□□□□ 0.19
PLXNA1-201ENST00000393409 PDE4AP27815 886 aa16.22■□□□□ 0.19
PLXNA1-201ENST00000393409 CENPJQ9HC77 1338 aaPredicted RBP16.22■□□□□ 0.19
PLXNA1-201ENST00000393409 GPS2Q13227 327 aa16.21■□□□□ 0.19
PLXNA1-201ENST00000393409 KIF3AQ9Y496 699 aa16.19■□□□□ 0.18
PLXNA1-201ENST00000393409 MAP7D2Q96T17 732 aa16.19■□□□□ 0.18
PLXNA1-201ENST00000393409 RTF1Q92541 710 aaKnown RBP16.19■□□□□ 0.18
PLXNA1-201ENST00000393409 CARMIL1Q5VZK9 1371 aa16.19■□□□□ 0.18
PLXNA1-201ENST00000393409 HDAC5Q9UQL6 1122 aa16.19■□□□□ 0.18
PLXNA1-201ENST00000393409 MYBBP1AQ9BQG0 1328 aaKnown RBP16.18■□□□□ 0.18
PLXNA1-201ENST00000393409 TEX35Q5T0J7 233 aa16.17■□□□□ 0.18
PLXNA1-201ENST00000393409 CUX2O14529 1486 aa16.17■□□□□ 0.18
PLXNA1-201ENST00000393409 TAOK2Q9UL54 1235 aa16.17■□□□□ 0.18
PLXNA1-201ENST00000393409 ZNF771Q7L3S4 317 aaPredicted RBP16.16■□□□□ 0.18
PLXNA1-201ENST00000393409 SMC4Q9NTJ3 1288 aa16.16■□□□□ 0.18
PLXNA1-201ENST00000393409 SMARCA2P51531 1590 aa16.15■□□□□ 0.18
PLXNA1-201ENST00000393409 RRP1P56182 461 aaKnown RBP16.15■□□□□ 0.18
PLXNA1-201ENST00000393409 WIZO95785 1651 aa16.15■□□□□ 0.18
PLXNA1-201ENST00000393409 CHMP4CQ96CF2 233 aa16.14■□□□□ 0.18
PLXNA1-201ENST00000393409 DDX49Q9Y6V7 483 aaKnown RBP16.14■□□□□ 0.18
PLXNA1-201ENST00000393409 TOP2AP11388 1531 aaKnown RBP16.14■□□□□ 0.17
PLXNA1-201ENST00000393409 TPM3P06753 285 aa16.14■□□□□ 0.17
PLXNA1-201ENST00000393409 TULP1O00294 542 aaPredicted RBP16.14■□□□□ 0.17
PLXNA1-201ENST00000393409 FAM43AQ8N2R8 423 aa16.13■□□□□ 0.17
PLXNA1-201ENST00000393409 MPHOSPH9Q99550 1183 aa16.13■□□□□ 0.17
PLXNA1-201ENST00000393409 A0A0U1RQG5 324 aaPredicted RBP16.13■□□□□ 0.17
PLXNA1-201ENST00000393409 CGNL1Q0VF96 1302 aa16.13■□□□□ 0.17
PLXNA1-201ENST00000393409 SRPK2P78362 688 aaKnown RBP16.12■□□□□ 0.17
PLXNA1-201ENST00000393409 ANKRD30AQ9BXX3 1397 aa16.12■□□□□ 0.17
PLXNA1-201ENST00000393409 CCDC70Q6NSX1 233 aa16.11■□□□□ 0.17
PLXNA1-201ENST00000393409 HDGFL2Q7Z4V5 671 aaPredicted RBP16.11■□□□□ 0.17
PLXNA1-201ENST00000393409 U2AF1L5P0DN76 240 aaPredicted RBP16.11■□□□□ 0.17
PLXNA1-201ENST00000393409 U2AF1Q01081 240 aaKnown RBP eCLIP16.11■□□□□ 0.17
PLXNA1-201ENST00000393409 CCDC88BA6NC98 1476 aa16.11■□□□□ 0.17
PLXNA1-201ENST00000393409 SPAG9O60271 1321 aaKnown RBP16.11■□□□□ 0.17
PLXNA1-201ENST00000393409 TRIM6-TRIM34B2RNG4 842 aa16.11■□□□□ 0.17
PLXNA1-201ENST00000393409 GOLGA6L19H0YKK7 550 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms