RNA–Protein interactions for RNA: ENST00000393384.3

CRAT-202, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 2 BASIC

Gene CRAT, Length 973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-202ENST00000393384 MAGI2Q86UL8 1455 aa31.01■■■□□ 2.55
CRAT-202ENST00000393384 CDK11AQ9UQ88 783 aaPredicted RBP31■■■□□ 2.55
CRAT-202ENST00000393384 YEATS2Q9ULM3 1422 aa30.96■■■□□ 2.55
CRAT-202ENST00000393384 PLCH2O75038 1416 aa30.95■■■□□ 2.54
CRAT-202ENST00000393384 MYO5CQ9NQX4 1742 aa30.95■■■□□ 2.54
CRAT-202ENST00000393384 CASKIN1Q8WXD9 1431 aa30.94■■■□□ 2.54
CRAT-202ENST00000393384 KIF14Q15058 1648 aa30.91■■■□□ 2.54
CRAT-202ENST00000393384 CLIP1P30622 1438 aa30.91■■■□□ 2.54
CRAT-202ENST00000393384 SCAPERQ9BY12 1400 aa30.91■■■□□ 2.54
CRAT-202ENST00000393384 TROQ12816 1431 aaPredicted RBP30.9■■■□□ 2.54
CRAT-202ENST00000393384 CCDC18Q5T9S5 1454 aa30.89■■■□□ 2.54
CRAT-202ENST00000393384 SIGLEC1Q9BZZ2 1709 aa30.89■■■□□ 2.54
CRAT-202ENST00000393384 PLPPR3Q6T4P5 718 aa30.85■■■□□ 2.53
CRAT-202ENST00000393384 FYCO1Q9BQS8 1478 aa30.84■■■□□ 2.53
CRAT-202ENST00000393384 EFCAB2Q5VUJ9 269 aa30.84■■■□□ 2.53
CRAT-202ENST00000393384 HSPA2P54652 639 aa30.83■■■□□ 2.53
CRAT-202ENST00000393384 MLECQ14165 292 aa30.83■■■□□ 2.53
CRAT-202ENST00000393384 FER1L4A9Z1Z3 1794 aa30.83■■■□□ 2.53
CRAT-202ENST00000393384 ATP10AO60312 1499 aa30.81■■■□□ 2.52
CRAT-202ENST00000393384 C9orf84Q5VXU9 1444 aa30.8■■■□□ 2.52
CRAT-202ENST00000393384 CDC42BPBQ9Y5S2 1711 aa30.76■■■□□ 2.52
CRAT-202ENST00000393384 ARHGEF12Q9NZN5 1544 aa30.76■■■□□ 2.51
CRAT-202ENST00000393384 ZNF518AQ6AHZ1 1483 aa30.74■■■□□ 2.51
CRAT-202ENST00000393384 ARHGAP5Q13017 1502 aa30.73■■■□□ 2.51
CRAT-202ENST00000393384 PREX2Q70Z35 1606 aa30.69■■■□□ 2.5
CRAT-202ENST00000393384 KDM5CP41229 1560 aa30.67■■■□□ 2.5
CRAT-202ENST00000393384 CDC42BPAQ5VT25 1732 aa30.67■■■□□ 2.5
CRAT-202ENST00000393384 CEP162Q5TB80 1403 aa30.64■■■□□ 2.5
CRAT-202ENST00000393384 AFAP1Q8N556 730 aa30.64■■■□□ 2.5
CRAT-202ENST00000393384 PREX1Q8TCU6 1659 aa30.64■■■□□ 2.5
CRAT-202ENST00000393384 CERKQ8TCT0 537 aa30.61■■■□□ 2.49
CRAT-202ENST00000393384 MYT1LQ9UL68 1186 aa30.6■■■□□ 2.49
CRAT-202ENST00000393384 CEBPAP49715 358 aaPredicted RBP30.58■■■□□ 2.49
CRAT-202ENST00000393384 REREQ9P2R6 1566 aa30.58■■■□□ 2.49
CRAT-202ENST00000393384 DIP2CQ9Y2E4 1556 aa30.58■■■□□ 2.49
CRAT-202ENST00000393384 ITSN2Q9NZM3 1697 aa30.56■■■□□ 2.48
CRAT-202ENST00000393384 MLH3Q9UHC1 1453 aa30.56■■■□□ 2.48
CRAT-202ENST00000393384 ABCC1P33527 1531 aa30.55■■■□□ 2.48
CRAT-202ENST00000393384 SETD1BQ9UPS6 1966 aaKnown RBP30.55■■■□□ 2.48
CRAT-202ENST00000393384 UHRF1BP1Q6BDS2 1440 aa30.53■■■□□ 2.48
CRAT-202ENST00000393384 ABCA6Q8N139 1617 aa30.51■■■□□ 2.47
CRAT-202ENST00000393384 DMRT2Q9Y5R5 561 aa30.5■■■□□ 2.47
CRAT-202ENST00000393384 GPATCH8Q9UKJ3 1502 aaKnown RBP30.49■■■□□ 2.47
CRAT-202ENST00000393384 LOC105371045A0A1W2PR82 267 aa30.49■■■□□ 2.47
CRAT-202ENST00000393384 MTUS2Q5JR59 1369 aa30.49■■■□□ 2.47
CRAT-202ENST00000393384 AGLP35573 1532 aa30.48■■■□□ 2.47
CRAT-202ENST00000393384 TRAPPC8Q9Y2L5 1435 aa30.47■■■□□ 2.47
CRAT-202ENST00000393384 SAMD9LQ8IVG5 1584 aa30.45■■■□□ 2.47
CRAT-202ENST00000393384 STRCQ7RTU9 1775 aa30.44■■■□□ 2.46
CRAT-202ENST00000393384 EHBP1L1Q8N3D4 1523 aa30.44■■■□□ 2.46
CRAT-202ENST00000393384 ESF1Q9H501 851 aaKnown RBP30.44■■■□□ 2.46
CRAT-202ENST00000393384 C3P01024 1663 aa30.42■■■□□ 2.46
CRAT-202ENST00000393384 CCNB3Q8WWL7 1395 aa30.41■■■□□ 2.46
CRAT-202ENST00000393384 ZNF777Q9ULD5 760 aaPredicted RBP30.41■■■□□ 2.46
CRAT-202ENST00000393384 KIDINS220Q9ULH0 1771 aa30.39■■■□□ 2.46
CRAT-202ENST00000393384 CFDP1Q9UEE9 299 aaPredicted RBP30.37■■■□□ 2.45
CRAT-202ENST00000393384 CNTLNQ9NXG0 1405 aa30.37■■■□□ 2.45
CRAT-202ENST00000393384 SYCP2Q9BX26 1530 aa30.37■■■□□ 2.45
CRAT-202ENST00000393384 TIAM1Q13009 1591 aa30.36■■■□□ 2.45
CRAT-202ENST00000393384 PLEKHH2Q8IVE3 1493 aa30.35■■■□□ 2.45
CRAT-202ENST00000393384 PTPRTO14522 1441 aa30.34■■■□□ 2.45
CRAT-202ENST00000393384 KIAA1107Q9UPP5 1409 aa30.34■■■□□ 2.45
CRAT-202ENST00000393384 VPS8Q8N3P4 1428 aa30.33■■■□□ 2.45
CRAT-202ENST00000393384 SUPT6HQ7KZ85 1726 aaKnown RBP30.32■■■□□ 2.44
CRAT-202ENST00000393384 HNRNPMP52272 730 aaKnown RBP eCLIP30.3■■■□□ 2.44
CRAT-202ENST00000393384 SPAG9O60271 1321 aaKnown RBP30.25■■■□□ 2.43
CRAT-202ENST00000393384 MROH2AA6NES4 1674 aa30.24■■■□□ 2.43
CRAT-202ENST00000393384 NCOA2Q15596 1464 aa30.24■■■□□ 2.43
CRAT-202ENST00000393384 NPATQ14207 1427 aa30.23■■■□□ 2.43
CRAT-202ENST00000393384 NCOA1Q15788 1441 aa30.22■■■□□ 2.43
CRAT-202ENST00000393384 ATP7AQ04656 1500 aa30.22■■■□□ 2.43
CRAT-202ENST00000393384 INO80Q9ULG1 1556 aaPredicted RBP30.22■■■□□ 2.43
CRAT-202ENST00000393384 ZNF644Q9H582 1327 aaPredicted RBP30.19■■■□□ 2.42
CRAT-202ENST00000393384 ZMYM3Q14202 1370 aa30.18■■■□□ 2.42
CRAT-202ENST00000393384 MAP3K1Q13233 1512 aa30.18■■■□□ 2.42
CRAT-202ENST00000393384 LRRC9Q6ZRR7 1453 aa30.18■■■□□ 2.42
CRAT-202ENST00000393384 MBD5Q9P267 1494 aa30.17■■■□□ 2.42
CRAT-202ENST00000393384 LTBP4Q8N2S1 1624 aa30.15■■■□□ 2.42
CRAT-202ENST00000393384 IQSEC2Q5JU85 1478 aa30.14■■■□□ 2.42
CRAT-202ENST00000393384 PLXNC1O60486 1568 aa30.14■■■□□ 2.42
CRAT-202ENST00000393384 CAMSAP1Q5T5Y3 1602 aa30.14■■■□□ 2.41
CRAT-202ENST00000393384 ADGBQ8N7X0 1667 aa30.14■■■□□ 2.41
CRAT-202ENST00000393384 A2MP01023 1474 aa30.13■■■□□ 2.41
CRAT-202ENST00000393384 DISP3Q9P2K9 1392 aa30.12■■■□□ 2.41
CRAT-202ENST00000393384 CAMSAP2Q08AD1 1489 aa30.1■■■□□ 2.41
CRAT-202ENST00000393384 CLTCQ00610 1675 aaKnown RBP30.09■■■□□ 2.41
CRAT-202ENST00000393384 RTEL1-TNFRSF6BF6WH68 1400 aa30.07■■■□□ 2.4
CRAT-202ENST00000393384 RSPH4AQ5TD94 716 aa30.06■■■□□ 2.4
CRAT-202ENST00000393384 KANK4Q5T7N3 995 aaPredicted RBP30.05■■■□□ 2.4
CRAT-202ENST00000393384 PPP6R1Q9UPN7 881 aa30.05■■■□□ 2.4
CRAT-202ENST00000393384 ZNF142P52746 1687 aaPredicted RBP30.04■■■□□ 2.4
CRAT-202ENST00000393384 MYO3AQ8NEV4 1616 aa30.04■■■□□ 2.4
CRAT-202ENST00000393384 GGT6Q6P531 493 aa30.04■■■□□ 2.4
CRAT-202ENST00000393384 CCDC141Q6ZP82 1450 aa30.04■■■□□ 2.4
CRAT-202ENST00000393384 PTPRKQ15262 1439 aa30.04■■■□□ 2.4
CRAT-202ENST00000393384 PLA2R1Q13018 1463 aa30.03■■■□□ 2.4
CRAT-202ENST00000393384 ARHGEF5Q12774 1597 aa30.02■■■□□ 2.4
CRAT-202ENST00000393384 PKD2Q13563 968 aa30.01■■■□□ 2.39
CRAT-202ENST00000393384 NCKAP5LQ9HCH0 1330 aa30■■■□□ 2.39
CRAT-202ENST00000393384 CEP170BQ9Y4F5 1589 aaPredicted RBP30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms