RNA–Protein interactions for RNA: ENST00000392824.8

CSHL1-204, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSHL1, Length 823 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-204ENST00000392824 CFDP1Q9UEE9 299 aaPredicted RBP25.2■■□□□ 1.62
CSHL1-204ENST00000392824 ZNF777Q9ULD5 760 aaPredicted RBP25.2■■□□□ 1.62
CSHL1-204ENST00000392824 DENND4BO75064 1496 aaPredicted RBP25.2■■□□□ 1.62
CSHL1-204ENST00000392824 MYO5CQ9NQX4 1742 aa25.2■■□□□ 1.62
CSHL1-204ENST00000392824 LRRC9Q6ZRR7 1453 aa25.19■■□□□ 1.62
CSHL1-204ENST00000392824 SCAPERQ9BY12 1400 aa25.19■■□□□ 1.62
CSHL1-204ENST00000392824 ADGRL1O94910 1474 aa25.18■■□□□ 1.62
CSHL1-204ENST00000392824 GPATCH8Q9UKJ3 1502 aaKnown RBP25.17■■□□□ 1.62
CSHL1-204ENST00000392824 NCOA2Q15596 1464 aa25.12■■□□□ 1.61
CSHL1-204ENST00000392824 PREX2Q70Z35 1606 aa25.11■■□□□ 1.61
CSHL1-204ENST00000392824 SUPT6HQ7KZ85 1726 aaKnown RBP25.09■■□□□ 1.61
CSHL1-204ENST00000392824 CDC42BPBQ9Y5S2 1711 aa25.09■■□□□ 1.61
CSHL1-204ENST00000392824 AFAP1Q8N556 730 aa25.08■■□□□ 1.61
CSHL1-204ENST00000392824 MYT1LQ9UL68 1186 aa25.07■■□□□ 1.6
CSHL1-204ENST00000392824 CDC42BPAQ5VT25 1732 aa25.06■■□□□ 1.6
CSHL1-204ENST00000392824 POGZQ7Z3K3 1410 aa25.06■■□□□ 1.6
CSHL1-204ENST00000392824 HNRNPMP52272 730 aaKnown RBP eCLIP25.05■■□□□ 1.6
CSHL1-204ENST00000392824 PLEKHH2Q8IVE3 1493 aa25.02■■□□□ 1.6
CSHL1-204ENST00000392824 ZNF644Q9H582 1327 aaPredicted RBP25.02■■□□□ 1.6
CSHL1-204ENST00000392824 ZNF518AQ6AHZ1 1483 aa25.02■■□□□ 1.6
CSHL1-204ENST00000392824 FRMPD1Q5SYB0 1578 aa25.01■■□□□ 1.59
CSHL1-204ENST00000392824 KIAA1107Q9UPP5 1409 aa25■■□□□ 1.59
CSHL1-204ENST00000392824 ABCC1P33527 1531 aa24.99■■□□□ 1.59
CSHL1-204ENST00000392824 MAGI2Q86UL8 1455 aa24.99■■□□□ 1.59
CSHL1-204ENST00000392824 ARHGEF12Q9NZN5 1544 aa24.99■■□□□ 1.59
CSHL1-204ENST00000392824 TRAPPC8Q9Y2L5 1435 aa24.99■■□□□ 1.59
CSHL1-204ENST00000392824 RICTORQ6R327 1708 aa24.98■■□□□ 1.59
CSHL1-204ENST00000392824 ITSN2Q9NZM3 1697 aa24.97■■□□□ 1.59
CSHL1-204ENST00000392824 SAMD9LQ8IVG5 1584 aa24.97■■□□□ 1.59
CSHL1-204ENST00000392824 ARID4BQ4LE39 1312 aaPredicted RBP24.95■■□□□ 1.58
CSHL1-204ENST00000392824 ZMYM4Q5VZL5 1548 aa24.95■■□□□ 1.58
CSHL1-204ENST00000392824 MYOM3Q5VTT5 1437 aa24.95■■□□□ 1.58
CSHL1-204ENST00000392824 SPAG9O60271 1321 aaKnown RBP24.93■■□□□ 1.58
CSHL1-204ENST00000392824 SYCP2Q9BX26 1530 aa24.93■■□□□ 1.58
CSHL1-204ENST00000392824 RSPH4AQ5TD94 716 aa24.93■■□□□ 1.58
CSHL1-204ENST00000392824 YEATS2Q9ULM3 1422 aa24.93■■□□□ 1.58
CSHL1-204ENST00000392824 ZFYVE16Q7Z3T8 1539 aa24.92■■□□□ 1.58
CSHL1-204ENST00000392824 MIA2Q96PC5 1412 aa24.92■■□□□ 1.58
CSHL1-204ENST00000392824 AEBP2Q6ZN18 517 aaPredicted RBP24.9■■□□□ 1.58
CSHL1-204ENST00000392824 KDM5CP41229 1560 aa24.89■■□□□ 1.58
CSHL1-204ENST00000392824 PPARGC1BQ86YN6 1023 aaKnown RBP24.89■■□□□ 1.58
CSHL1-204ENST00000392824 CAMSAP2Q08AD1 1489 aa24.89■■□□□ 1.57
CSHL1-204ENST00000392824 MLH3Q9UHC1 1453 aa24.89■■□□□ 1.57
CSHL1-204ENST00000392824 KDM4FA0A1W2PPD8 638 aa24.88■■□□□ 1.57
CSHL1-204ENST00000392824 ARHGEF40Q8TER5 1519 aa24.87■■□□□ 1.57
CSHL1-204ENST00000392824 ATP10AO60312 1499 aa24.87■■□□□ 1.57
CSHL1-204ENST00000392824 MBD5Q9P267 1494 aa24.86■■□□□ 1.57
CSHL1-204ENST00000392824 TSPY4P0CV99 314 aa24.86■■□□□ 1.57
CSHL1-204ENST00000392824 TSPY10P0CW01 314 aa24.86■■□□□ 1.57
CSHL1-204ENST00000392824 HECW2Q9P2P5 1572 aa24.83■■□□□ 1.57
CSHL1-204ENST00000392824 C9orf84Q5VXU9 1444 aa24.81■■□□□ 1.56
CSHL1-204ENST00000392824 CCDC141Q6ZP82 1450 aa24.81■■□□□ 1.56
CSHL1-204ENST00000392824 FGD6Q6ZV73 1430 aa24.8■■□□□ 1.56
CSHL1-204ENST00000392824 MLECQ14165 292 aa24.78■■□□□ 1.56
CSHL1-204ENST00000392824 RTEL1-TNFRSF6BF6WH68 1400 aa24.77■■□□□ 1.56
CSHL1-204ENST00000392824 FAM50AQ14320 339 aaKnown RBP24.76■■□□□ 1.55
CSHL1-204ENST00000392824 ATP7AQ04656 1500 aa24.75■■□□□ 1.55
CSHL1-204ENST00000392824 DIP2CQ9Y2E4 1556 aa24.74■■□□□ 1.55
CSHL1-204ENST00000392824 KIDINS220Q9ULH0 1771 aa24.73■■□□□ 1.55
CSHL1-204ENST00000392824 ARHGEF5Q12774 1597 aa24.73■■□□□ 1.55
CSHL1-204ENST00000392824 PTPN23Q9H3S7 1636 aa24.72■■□□□ 1.55
CSHL1-204ENST00000392824 ABCA6Q8N139 1617 aa24.71■■□□□ 1.55
CSHL1-204ENST00000392824 TCOF1Q13428 1488 aaKnown RBP24.7■■□□□ 1.55
CSHL1-204ENST00000392824 INO80Q9ULG1 1556 aaPredicted RBP24.68■■□□□ 1.54
CSHL1-204ENST00000392824 A2MP01023 1474 aa24.67■■□□□ 1.54
CSHL1-204ENST00000392824 REREQ9P2R6 1566 aa24.67■■□□□ 1.54
CSHL1-204ENST00000392824 ABCC5O15440 1437 aa24.66■■□□□ 1.54
CSHL1-204ENST00000392824 ESF1Q9H501 851 aaKnown RBP24.65■■□□□ 1.54
CSHL1-204ENST00000392824 DHX29Q7Z478 1369 aaKnown RBP24.65■■□□□ 1.54
CSHL1-204ENST00000392824 BCORL1Q5H9F3 1711 aa24.64■■□□□ 1.54
CSHL1-204ENST00000392824 AGLP35573 1532 aa24.64■■□□□ 1.53
CSHL1-204ENST00000392824 DAPK1P53355 1430 aa24.63■■□□□ 1.53
CSHL1-204ENST00000392824 CHIC2Q9UKJ5 165 aa24.63■■□□□ 1.53
CSHL1-204ENST00000392824 SIGLEC1Q9BZZ2 1709 aa24.61■■□□□ 1.53
CSHL1-204ENST00000392824 ADAMTSL3P82987 1691 aa24.6■■□□□ 1.53
CSHL1-204ENST00000392824 GGT6Q6P531 493 aa24.6■■□□□ 1.53
CSHL1-204ENST00000392824 RRP7BPQ9NSQ0 103 aa24.59■■□□□ 1.53
CSHL1-204ENST00000392824 MAST1Q9Y2H9 1570 aa24.59■■□□□ 1.53
CSHL1-204ENST00000392824 KIF3BO15066 747 aa24.58■■□□□ 1.53
CSHL1-204ENST00000392824 SHANK2Q9UPX8 1470 aa24.58■■□□□ 1.52
CSHL1-204ENST00000392824 PLPPR3Q6T4P5 718 aa24.56■■□□□ 1.52
CSHL1-204ENST00000392824 DNMT1P26358 1616 aaKnown RBP24.56■■□□□ 1.52
CSHL1-204ENST00000392824 ADGBQ8N7X0 1667 aa24.56■■□□□ 1.52
CSHL1-204ENST00000392824 ANKRD30AQ9BXX3 1397 aa24.55■■□□□ 1.52
CSHL1-204ENST00000392824 ITGAEP38570 1179 aa24.55■■□□□ 1.52
CSHL1-204ENST00000392824 PTPRMP28827 1452 aa24.55■■□□□ 1.52
CSHL1-204ENST00000392824 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.54■■□□□ 1.52
CSHL1-204ENST00000392824 MADDQ8WXG6 1647 aa24.54■■□□□ 1.52
CSHL1-204ENST00000392824 PLXNC1O60486 1568 aa24.54■■□□□ 1.52
CSHL1-204ENST00000392824 KIF15Q9NS87 1388 aa24.54■■□□□ 1.52
CSHL1-204ENST00000392824 PPP6R1Q9UPN7 881 aa24.53■■□□□ 1.52
CSHL1-204ENST00000392824 RRBP1Q9P2E9 1410 aaKnown RBP24.49■■□□□ 1.51
CSHL1-204ENST00000392824 NCOA1Q15788 1441 aa24.48■■□□□ 1.51
CSHL1-204ENST00000392824 RIMS1Q86UR5 1692 aaKnown RBP24.47■■□□□ 1.51
CSHL1-204ENST00000392824 DUOX2Q9NRD8 1548 aa24.47■■□□□ 1.51
CSHL1-204ENST00000392824 CNTLNQ9NXG0 1405 aa24.47■■□□□ 1.51
CSHL1-204ENST00000392824 CROCC2H7BZ55 1655 aa24.46■■□□□ 1.51
CSHL1-204ENST00000392824 CEBPAP49715 358 aaPredicted RBP24.46■■□□□ 1.51
CSHL1-204ENST00000392824 FER1L4A9Z1Z3 1794 aa24.44■■□□□ 1.5
CSHL1-204ENST00000392824 WASHC2CQ9Y4E1 1318 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms