RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 THOC2Q8NI27 1593 aaKnown RBP24.7■■□□□ 1.54
ERCC2-201ENST00000391941 PAK3O75914 559 aaPredicted RBP24.68■■□□□ 1.54
ERCC2-201ENST00000391941 KIF7Q2M1P5 1343 aa24.68■■□□□ 1.54
ERCC2-201ENST00000391941 AKNAQ7Z591 1439 aa24.67■■□□□ 1.54
ERCC2-201ENST00000391941 ABCA5Q8WWZ7 1642 aa24.66■■□□□ 1.54
ERCC2-201ENST00000391941 TCOF1Q13428 1488 aaKnown RBP24.66■■□□□ 1.54
ERCC2-201ENST00000391941 HECW1Q76N89 1606 aa24.65■■□□□ 1.54
ERCC2-201ENST00000391941 CDK13Q14004 1512 aaKnown RBP24.63■■□□□ 1.53
ERCC2-201ENST00000391941 PRKCSHP14314 528 aaPredicted RBP24.63■■□□□ 1.53
ERCC2-201ENST00000391941 GCC2Q8IWJ2 1684 aa24.63■■□□□ 1.53
ERCC2-201ENST00000391941 NCOA1Q15788 1441 aa24.61■■□□□ 1.53
ERCC2-201ENST00000391941 SLC4A1APQ9BWU0 796 aaKnown RBP24.61■■□□□ 1.53
ERCC2-201ENST00000391941 ERICH6BQ5W0A0 696 aa24.6■■□□□ 1.53
ERCC2-201ENST00000391941 ZBED9Q6R2W3 1325 aa24.6■■□□□ 1.53
ERCC2-201ENST00000391941 SALL2Q9Y467 1007 aaPredicted RBP24.57■■□□□ 1.52
ERCC2-201ENST00000391941 DEKP35659 375 aaKnown RBP24.56■■□□□ 1.52
ERCC2-201ENST00000391941 LAMC3Q9Y6N6 1575 aa24.56■■□□□ 1.52
ERCC2-201ENST00000391941 EPRSP07814 1512 aaKnown RBP24.55■■□□□ 1.52
ERCC2-201ENST00000391941 ANKRD30BQ9BXX2 1392 aa24.52■■□□□ 1.52
ERCC2-201ENST00000391941 MIA2Q96PC5 1412 aa24.52■■□□□ 1.52
ERCC2-201ENST00000391941 ZNF777Q9ULD5 760 aaPredicted RBP24.5■■□□□ 1.51
ERCC2-201ENST00000391941 CCDC136Q96JN2 1154 aa24.49■■□□□ 1.51
ERCC2-201ENST00000391941 RPRD2Q5VT52 1461 aaKnown RBP24.49■■□□□ 1.51
ERCC2-201ENST00000391941 KIF21AQ7Z4S6 1674 aa24.49■■□□□ 1.51
ERCC2-201ENST00000391941 NOP58Q9Y2X3 529 aaKnown RBP24.48■■□□□ 1.51
ERCC2-201ENST00000391941 TEX14Q8IWB6 1497 aa24.47■■□□□ 1.51
ERCC2-201ENST00000391941 SPATA31E1Q6ZUB1 1445 aa24.45■■□□□ 1.51
ERCC2-201ENST00000391941 SLC24A1O60721 1099 aa24.45■■□□□ 1.5
ERCC2-201ENST00000391941 DAPK1P53355 1430 aa24.43■■□□□ 1.5
ERCC2-201ENST00000391941 NPM2Q86SE8 214 aaKnown RBP24.43■■□□□ 1.5
ERCC2-201ENST00000391941 PDS5BQ9NTI5 1447 aa24.41■■□□□ 1.5
ERCC2-201ENST00000391941 KDM2AQ9Y2K7 1162 aa24.41■■□□□ 1.5
ERCC2-201ENST00000391941 IQGAP2Q13576 1575 aa24.41■■□□□ 1.5
ERCC2-201ENST00000391941 ABCC5O15440 1437 aa24.4■■□□□ 1.5
ERCC2-201ENST00000391941 WDR62O43379 1518 aa24.4■■□□□ 1.5
ERCC2-201ENST00000391941 ROCK1Q13464 1354 aa24.39■■□□□ 1.5
ERCC2-201ENST00000391941 NUDCQ9Y266 331 aa24.39■■□□□ 1.5
ERCC2-201ENST00000391941 DHX29Q7Z478 1369 aaKnown RBP24.39■■□□□ 1.49
ERCC2-201ENST00000391941 TARBP1Q13395 1621 aaKnown RBP24.37■■□□□ 1.49
ERCC2-201ENST00000391941 SKAP1Q86WV1 359 aa24.37■■□□□ 1.49
ERCC2-201ENST00000391941 USP47Q96K76 1375 aa24.36■■□□□ 1.49
ERCC2-201ENST00000391941 TMC1Q8TDI8 760 aa24.36■■□□□ 1.49
ERCC2-201ENST00000391941 PKD2Q13563 968 aa24.34■■□□□ 1.49
ERCC2-201ENST00000391941 SMG6Q86US8 1419 aaKnown RBP24.31■■□□□ 1.48
ERCC2-201ENST00000391941 DNMT1P26358 1616 aaKnown RBP24.31■■□□□ 1.48
ERCC2-201ENST00000391941 PNISRQ8TF01 805 aaKnown RBP24.3■■□□□ 1.48
ERCC2-201ENST00000391941 BCORL1Q5H9F3 1711 aa24.3■■□□□ 1.48
ERCC2-201ENST00000391941 EXOC6Q8TAG9 804 aa24.28■■□□□ 1.48
ERCC2-201ENST00000391941 PBRM1Q86U86 1689 aa24.27■■□□□ 1.48
ERCC2-201ENST00000391941 PZPP20742 1482 aa24.27■■□□□ 1.48
ERCC2-201ENST00000391941 ANP32AP39687 249 aaKnown RBP24.27■■□□□ 1.48
ERCC2-201ENST00000391941 CFDP1Q9UEE9 299 aaPredicted RBP24.26■■□□□ 1.47
ERCC2-201ENST00000391941 ADAMTS12P58397 1594 aa24.26■■□□□ 1.47
ERCC2-201ENST00000391941 CARD11Q9BXL7 1154 aa24.25■■□□□ 1.47
ERCC2-201ENST00000391941 POLR1AO95602 1720 aaPredicted RBP24.25■■□□□ 1.47
ERCC2-201ENST00000391941 ST20-MTHFSA0A0A6YYL1 179 aa24.25■■□□□ 1.47
ERCC2-201ENST00000391941 IPO9Q96P70 1041 aaKnown RBP24.24■■□□□ 1.47
ERCC2-201ENST00000391941 LAS1LQ9Y4W2 734 aaKnown RBP24.24■■□□□ 1.47
ERCC2-201ENST00000391941 PRG4Q92954 1404 aaPredicted RBP24.24■■□□□ 1.47
ERCC2-201ENST00000391941 NUP153P49790 1475 aaKnown RBP24.23■■□□□ 1.47
ERCC2-201ENST00000391941 ZBTB47Q9UFB7 747 aaPredicted RBP24.23■■□□□ 1.47
ERCC2-201ENST00000391941 PLIN1O60240 522 aa24.21■■□□□ 1.47
ERCC2-201ENST00000391941 RNF123Q5XPI4 1314 aa24.2■■□□□ 1.46
ERCC2-201ENST00000391941 MBD5Q9P267 1494 aa24.2■■□□□ 1.46
ERCC2-201ENST00000391941 CDCA7LQ96GN5 454 aa24.2■■□□□ 1.46
ERCC2-201ENST00000391941 DISP1Q96F81 1524 aa24.17■■□□□ 1.46
ERCC2-201ENST00000391941 DCAF11Q8TEB1 546 aa24.17■■□□□ 1.46
ERCC2-201ENST00000391941 KIAA1107Q9UPP5 1409 aa24.17■■□□□ 1.46
ERCC2-201ENST00000391941 RTN4Q9NQC3 1192 aaKnown RBP24.17■■□□□ 1.46
ERCC2-201ENST00000391941 CAMSAP2Q08AD1 1489 aa24.15■■□□□ 1.46
ERCC2-201ENST00000391941 FBLN2P98095 1184 aa24.14■■□□□ 1.45
ERCC2-201ENST00000391941 MYT1LQ9UL68 1186 aa24.14■■□□□ 1.45
ERCC2-201ENST00000391941 KIAA0556O60303 1618 aa24.13■■□□□ 1.45
ERCC2-201ENST00000391941 RRP1P56182 461 aaKnown RBP24.13■■□□□ 1.45
ERCC2-201ENST00000391941 RGL3Q3MIN7 710 aa24.12■■□□□ 1.45
ERCC2-201ENST00000391941 RTL5Q5HYW3 569 aaPredicted RBP24.12■■□□□ 1.45
ERCC2-201ENST00000391941 ZNF608Q9ULD9 1512 aaPredicted RBP24.11■■□□□ 1.45
ERCC2-201ENST00000391941 KDM5CP41229 1560 aa24.1■■□□□ 1.45
ERCC2-201ENST00000391941 RAPGEF6Q8TEU7 1601 aa24.1■■□□□ 1.45
ERCC2-201ENST00000391941 CC2D1BQ5T0F9 858 aaKnown RBP24.1■■□□□ 1.45
ERCC2-201ENST00000391941 NUP155O75694 1391 aa24.1■■□□□ 1.45
ERCC2-201ENST00000391941 KIAA0586Q9BVV6 1533 aa24.1■■□□□ 1.45
ERCC2-201ENST00000391941 IL27Q8NEV9 243 aa24.09■■□□□ 1.45
ERCC2-201ENST00000391941 RCAN3Q9UKA8 241 aa24.09■■□□□ 1.45
ERCC2-201ENST00000391941 ARID4BQ4LE39 1312 aaPredicted RBP24.09■■□□□ 1.45
ERCC2-201ENST00000391941 TROQ12816 1431 aaPredicted RBP24.09■■□□□ 1.45
ERCC2-201ENST00000391941 KIF14Q15058 1648 aa24.08■■□□□ 1.44
ERCC2-201ENST00000391941 GPATCH8Q9UKJ3 1502 aaKnown RBP24.07■■□□□ 1.44
ERCC2-201ENST00000391941 PLB1Q6P1J6 1458 aa24.05■■□□□ 1.44
ERCC2-201ENST00000391941 PDE4AP27815 886 aa24.05■■□□□ 1.44
ERCC2-201ENST00000391941 NBPF1Q3BBV0 1214 aa24.05■■□□□ 1.44
ERCC2-201ENST00000391941 ANKRD30AQ9BXX3 1397 aa24.04■■□□□ 1.44
ERCC2-201ENST00000391941 ROCK2O75116 1388 aaKnown RBP24.04■■□□□ 1.44
ERCC2-201ENST00000391941 ANKRD50Q9ULJ7 1429 aa24.03■■□□□ 1.44
ERCC2-201ENST00000391941 KIF15Q9NS87 1388 aa24.02■■□□□ 1.44
ERCC2-201ENST00000391941 SLC4A3P48751 1232 aa24.02■■□□□ 1.44
ERCC2-201ENST00000391941 MYBBP1AQ9BQG0 1328 aaKnown RBP24.02■■□□□ 1.44
ERCC2-201ENST00000391941 ADGRL2O95490 1459 aa24.02■■□□□ 1.44
ERCC2-201ENST00000391941 HNRNPMP52272 730 aaKnown RBP eCLIP24.02■■□□□ 1.442e-7■■■■□ 22.5
ERCC2-201ENST00000391941 RALGAPBQ86X10 1494 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms