RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 ZFYVE16Q7Z3T8 1539 aa11.36□□□□□ -0.59
RNU1-56P-201ENST00000391303 ATP10AO60312 1499 aa11.35□□□□□ -0.59
RNU1-56P-201ENST00000391303 YEATS2Q9ULM3 1422 aa11.35□□□□□ -0.59
RNU1-56P-201ENST00000391303 ARHGAP5Q13017 1502 aa11.34□□□□□ -0.59
RNU1-56P-201ENST00000391303 C9orf84Q5VXU9 1444 aa11.34□□□□□ -0.59
RNU1-56P-201ENST00000391303 ADAMTSL3P82987 1691 aa11.33□□□□□ -0.6
RNU1-56P-201ENST00000391303 MLH3Q9UHC1 1453 aa11.32□□□□□ -0.6
RNU1-56P-201ENST00000391303 RICTORQ6R327 1708 aa11.32□□□□□ -0.6
RNU1-56P-201ENST00000391303 PCF11O94913 1555 aaKnown RBP11.32□□□□□ -0.6
RNU1-56P-201ENST00000391303 AFAP1Q8N556 730 aa11.31□□□□□ -0.6
RNU1-56P-201ENST00000391303 KIAA1107Q9UPP5 1409 aa11.31□□□□□ -0.6
RNU1-56P-201ENST00000391303 HECW2Q9P2P5 1572 aa11.31□□□□□ -0.6
RNU1-56P-201ENST00000391303 KDM5CP41229 1560 aa11.3□□□□□ -0.6
RNU1-56P-201ENST00000391303 PLEKHH2Q8IVE3 1493 aa11.3□□□□□ -0.6
RNU1-56P-201ENST00000391303 BCORL1Q5H9F3 1711 aa11.29□□□□□ -0.6
RNU1-56P-201ENST00000391303 MTUS2Q5JR59 1369 aa11.28□□□□□ -0.6
RNU1-56P-201ENST00000391303 MYO5CQ9NQX4 1742 aa11.28□□□□□ -0.6
RNU1-56P-201ENST00000391303 GPATCH8Q9UKJ3 1502 aaKnown RBP11.28□□□□□ -0.6
RNU1-56P-201ENST00000391303 REREQ9P2R6 1566 aa11.28□□□□□ -0.6
RNU1-56P-201ENST00000391303 CEP162Q5TB80 1403 aa11.27□□□□□ -0.6
RNU1-56P-201ENST00000391303 CFDP1Q9UEE9 299 aaPredicted RBP11.27□□□□□ -0.61
RNU1-56P-201ENST00000391303 CCNB3Q8WWL7 1395 aa11.27□□□□□ -0.61
RNU1-56P-201ENST00000391303 TRAPPC8Q9Y2L5 1435 aa11.26□□□□□ -0.61
RNU1-56P-201ENST00000391303 ABCC1P33527 1531 aa11.26□□□□□ -0.61
RNU1-56P-201ENST00000391303 AGLP35573 1532 aa11.26□□□□□ -0.61
RNU1-56P-201ENST00000391303 ARHGEF12Q9NZN5 1544 aa11.26□□□□□ -0.61
RNU1-56P-201ENST00000391303 MYT1LQ9UL68 1186 aa11.26□□□□□ -0.61
RNU1-56P-201ENST00000391303 PREX2Q70Z35 1606 aa11.25□□□□□ -0.61
RNU1-56P-201ENST00000391303 MADDQ8WXG6 1647 aa11.25□□□□□ -0.61
RNU1-56P-201ENST00000391303 RSPH4AQ5TD94 716 aa11.24□□□□□ -0.61
RNU1-56P-201ENST00000391303 SPAG9O60271 1321 aaKnown RBP11.24□□□□□ -0.61
RNU1-56P-201ENST00000391303 LMTK3Q96Q04 1460 aa11.24□□□□□ -0.61
RNU1-56P-201ENST00000391303 MLECQ14165 292 aa11.23□□□□□ -0.61
RNU1-56P-201ENST00000391303 PPP6R1Q9UPN7 881 aa11.23□□□□□ -0.61
RNU1-56P-201ENST00000391303 CNTLNQ9NXG0 1405 aa11.23□□□□□ -0.61
RNU1-56P-201ENST00000391303 EHBP1L1Q8N3D4 1523 aa11.22□□□□□ -0.61
RNU1-56P-201ENST00000391303 ESF1Q9H501 851 aaKnown RBP11.22□□□□□ -0.61
RNU1-56P-201ENST00000391303 ZNF777Q9ULD5 760 aaPredicted RBP11.22□□□□□ -0.61
RNU1-56P-201ENST00000391303 DIP2CQ9Y2E4 1556 aa11.2□□□□□ -0.62
RNU1-56P-201ENST00000391303 HNRNPMP52272 730 aaKnown RBP eCLIP11.2□□□□□ -0.62
RNU1-56P-201ENST00000391303 RTEL1-TNFRSF6BF6WH68 1400 aa11.19□□□□□ -0.62
RNU1-56P-201ENST00000391303 VPS8Q8N3P4 1428 aa11.19□□□□□ -0.62
RNU1-56P-201ENST00000391303 LRRIQ1Q96JM4 1722 aa11.19□□□□□ -0.62
RNU1-56P-201ENST00000391303 CDC42BPBQ9Y5S2 1711 aa11.18□□□□□ -0.62
RNU1-56P-201ENST00000391303 DMRT2Q9Y5R5 561 aa11.18□□□□□ -0.62
RNU1-56P-201ENST00000391303 SAMD9LQ8IVG5 1584 aa11.18□□□□□ -0.62
RNU1-56P-201ENST00000391303 ILDR1Q86SU0 546 aaPredicted RBP11.17□□□□□ -0.62
RNU1-56P-201ENST00000391303 MAP3K1Q13233 1512 aa11.17□□□□□ -0.62
RNU1-56P-201ENST00000391303 SYCP2Q9BX26 1530 aa11.17□□□□□ -0.62
RNU1-56P-201ENST00000391303 MBD5Q9P267 1494 aa11.17□□□□□ -0.62
RNU1-56P-201ENST00000391303 RIMS1Q86UR5 1692 aaKnown RBP11.16□□□□□ -0.62
RNU1-56P-201ENST00000391303 NPATQ14207 1427 aa11.16□□□□□ -0.62
RNU1-56P-201ENST00000391303 UHRF1BP1Q6BDS2 1440 aa11.16□□□□□ -0.62
RNU1-56P-201ENST00000391303 ITSN2Q9NZM3 1697 aa11.15□□□□□ -0.62
RNU1-56P-201ENST00000391303 A2MP01023 1474 aa11.15□□□□□ -0.62
RNU1-56P-201ENST00000391303 NCOA2Q15596 1464 aa11.15□□□□□ -0.62
RNU1-56P-201ENST00000391303 ABCA6Q8N139 1617 aa11.15□□□□□ -0.62
RNU1-56P-201ENST00000391303 ATP7AQ04656 1500 aa11.14□□□□□ -0.63
RNU1-56P-201ENST00000391303 CEBPAP49715 358 aaPredicted RBP11.14□□□□□ -0.63
RNU1-56P-201ENST00000391303 HSPA2P54652 639 aa11.14□□□□□ -0.63
RNU1-56P-201ENST00000391303 FBXO41Q8TF61 875 aa11.14□□□□□ -0.63
RNU1-56P-201ENST00000391303 CDC42BPAQ5VT25 1732 aa11.14□□□□□ -0.63
RNU1-56P-201ENST00000391303 SIGLEC1Q9BZZ2 1709 aa11.14□□□□□ -0.63
RNU1-56P-201ENST00000391303 DHX29Q7Z478 1369 aaKnown RBP11.14□□□□□ -0.63
RNU1-56P-201ENST00000391303 ZNF644Q9H582 1327 aaPredicted RBP11.13□□□□□ -0.63
RNU1-56P-201ENST00000391303 TIAM1Q13009 1591 aa11.13□□□□□ -0.63
RNU1-56P-201ENST00000391303 LOC105371045A0A1W2PR82 267 aa11.13□□□□□ -0.63
RNU1-56P-201ENST00000391303 KIDINS220Q9ULH0 1771 aa11.13□□□□□ -0.63
RNU1-56P-201ENST00000391303 LRRC9Q6ZRR7 1453 aa11.12□□□□□ -0.63
RNU1-56P-201ENST00000391303 MIA2Q96PC5 1412 aa11.12□□□□□ -0.63
RNU1-56P-201ENST00000391303 TSPY4P0CV99 314 aa11.12□□□□□ -0.63
RNU1-56P-201ENST00000391303 TSPY10P0CW01 314 aa11.12□□□□□ -0.63
RNU1-56P-201ENST00000391303 PLPPR3Q6T4P5 718 aa11.12□□□□□ -0.63
RNU1-56P-201ENST00000391303 ZMYM3Q14202 1370 aa11.12□□□□□ -0.63
RNU1-56P-201ENST00000391303 CCDC141Q6ZP82 1450 aa11.12□□□□□ -0.63
RNU1-56P-201ENST00000391303 PLXNC1O60486 1568 aa11.11□□□□□ -0.63
RNU1-56P-201ENST00000391303 INO80Q9ULG1 1556 aaPredicted RBP11.11□□□□□ -0.63
RNU1-56P-201ENST00000391303 FER1L4A9Z1Z3 1794 aa11.11□□□□□ -0.63
RNU1-56P-201ENST00000391303 FAM135AQ9P2D6 1515 aa11.1□□□□□ -0.63
RNU1-56P-201ENST00000391303 APLP2Q06481 763 aa11.09□□□□□ -0.63
RNU1-56P-201ENST00000391303 PTPRTO14522 1441 aa11.09□□□□□ -0.63
RNU1-56P-201ENST00000391303 CAMSAP2Q08AD1 1489 aa11.08□□□□□ -0.64
RNU1-56P-201ENST00000391303 GGT6Q6P531 493 aa11.08□□□□□ -0.64
RNU1-56P-201ENST00000391303 SUPT6HQ7KZ85 1726 aaKnown RBP11.07□□□□□ -0.64
RNU1-56P-201ENST00000391303 MYOM3Q5VTT5 1437 aa11.07□□□□□ -0.64
RNU1-56P-201ENST00000391303 ARHGEF5Q12774 1597 aa11.07□□□□□ -0.64
RNU1-56P-201ENST00000391303 PREX1Q8TCU6 1659 aa11.06□□□□□ -0.64
RNU1-56P-201ENST00000391303 KANK4Q5T7N3 995 aaPredicted RBP11.06□□□□□ -0.64
RNU1-56P-201ENST00000391303 KIF3BO15066 747 aa11.05□□□□□ -0.64
RNU1-56P-201ENST00000391303 PKD2Q13563 968 aa11.05□□□□□ -0.64
RNU1-56P-201ENST00000391303 PTPRKQ15262 1439 aa11.05□□□□□ -0.64
RNU1-56P-201ENST00000391303 CERKQ8TCT0 537 aa11.05□□□□□ -0.64
RNU1-56P-201ENST00000391303 MROH2AA6NES4 1674 aa11.04□□□□□ -0.64
RNU1-56P-201ENST00000391303 NCOA1Q15788 1441 aa11.03□□□□□ -0.64
RNU1-56P-201ENST00000391303 PLA2R1Q13018 1463 aa11.03□□□□□ -0.64
RNU1-56P-201ENST00000391303 WASHC2CQ9Y4E1 1318 aa11.03□□□□□ -0.64
RNU1-56P-201ENST00000391303 ADGBQ8N7X0 1667 aa11.02□□□□□ -0.64
RNU1-56P-201ENST00000391303 SETD1BQ9UPS6 1966 aaKnown RBP11.02□□□□□ -0.65
RNU1-56P-201ENST00000391303 C3P01024 1663 aa11.01□□□□□ -0.65
RNU1-56P-201ENST00000391303 MAST1Q9Y2H9 1570 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms