RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 ERBB3P21860 1342 aa5.99□□□□□ -1.45
RNU6-1228P-201ENST00000391014 MFRPQ9BY79 579 aa5.98□□□□□ -1.45
RNU6-1228P-201ENST00000391014 PKD2Q13563 968 aa5.97□□□□□ -1.45
RNU6-1228P-201ENST00000391014 STK24Q9Y6E0 443 aa5.97□□□□□ -1.45
RNU6-1228P-201ENST00000391014 RGL2O15211 777 aa5.96□□□□□ -1.46
RNU6-1228P-201ENST00000391014 VARS2Q5ST30 1063 aaKnown RBP5.96□□□□□ -1.46
RNU6-1228P-201ENST00000391014 ECM2O94769 699 aaPredicted RBP5.95□□□□□ -1.46
RNU6-1228P-201ENST00000391014 NLRP6P59044 892 aa5.95□□□□□ -1.46
RNU6-1228P-201ENST00000391014 KHSRPQ92945 711 aaKnown RBP eCLIP5.95□□□□□ -1.46
RNU6-1228P-201ENST00000391014 STK25O00506 426 aa5.94□□□□□ -1.46
RNU6-1228P-201ENST00000391014 ARSIQ5FYB1 569 aa5.94□□□□□ -1.46
RNU6-1228P-201ENST00000391014 RIMBP2O15034 1052 aa5.93□□□□□ -1.46
RNU6-1228P-201ENST00000391014 ZSWIM6Q9HCJ5 1215 aa5.93□□□□□ -1.46
RNU6-1228P-201ENST00000391014 KIF3CO14782 793 aa5.92□□□□□ -1.46
RNU6-1228P-201ENST00000391014 ZNF687Q8N1G0 1237 aa5.92□□□□□ -1.46
RNU6-1228P-201ENST00000391014 C2orf72A6NCS6 295 aa5.91□□□□□ -1.46
RNU6-1228P-201ENST00000391014 PPP1R37O75864 691 aa5.91□□□□□ -1.46
RNU6-1228P-201ENST00000391014 TAOK2Q9UL54 1235 aa5.89□□□□□ -1.47
RNU6-1228P-201ENST00000391014 ZNF316A6NFI3 1004 aaPredicted RBP5.88□□□□□ -1.47
RNU6-1228P-201ENST00000391014 NUDT7P0C024 238 aa5.86□□□□□ -1.47
RNU6-1228P-201ENST00000391014 POTEEQ6S8J3 1075 aa5.86□□□□□ -1.47
RNU6-1228P-201ENST00000391014 RNF166Q96A37 237 aaPredicted RBP5.85□□□□□ -1.47
RNU6-1228P-201ENST00000391014 ANKRD13DQ6ZTN6 518 aa5.84□□□□□ -1.47
RNU6-1228P-201ENST00000391014 MYT1LQ9UL68 1186 aa5.84□□□□□ -1.47
RNU6-1228P-201ENST00000391014 LHX6Q9UPM6 363 aa5.84□□□□□ -1.47
RNU6-1228P-201ENST00000391014 PCDHGA4Q9Y5G9 962 aa5.84□□□□□ -1.47
RNU6-1228P-201ENST00000391014 SLC34A2O95436 690 aa5.82□□□□□ -1.48
RNU6-1228P-201ENST00000391014 AXIN2Q9Y2T1 843 aa5.82□□□□□ -1.48
RNU6-1228P-201ENST00000391014 TMC2Q8TDI7 906 aa5.81□□□□□ -1.48
RNU6-1228P-201ENST00000391014 KDM4FA0A1W2PPD8 638 aa5.8□□□□□ -1.48
RNU6-1228P-201ENST00000391014 LSM11P83369 360 aaKnown RBP eCLIP5.8□□□□□ -1.48
RNU6-1228P-201ENST00000391014 NKX1-1Q15270 411 aaPredicted RBP5.77□□□□□ -1.49
RNU6-1228P-201ENST00000391014 HS6ST3Q8IZP7 471 aa5.77□□□□□ -1.49
RNU6-1228P-201ENST00000391014 FOXK1P85037 733 aa5.76□□□□□ -1.49
RNU6-1228P-201ENST00000391014 DSG2Q14126 1118 aa5.76□□□□□ -1.49
RNU6-1228P-201ENST00000391014 PLPP6Q8IY26 295 aa5.76□□□□□ -1.49
RNU6-1228P-201ENST00000391014 PTCD2Q8WV60 388 aaKnown RBP5.76□□□□□ -1.49
RNU6-1228P-201ENST00000391014 GPHNQ9NQX3 736 aaPredicted RBP5.76□□□□□ -1.49
RNU6-1228P-201ENST00000391014 CHGAP10645 457 aaKnown RBP5.75□□□□□ -1.49
RNU6-1228P-201ENST00000391014 PTGER2P43116 358 aa5.75□□□□□ -1.49
RNU6-1228P-201ENST00000391014 PBX2P40425 430 aa5.74□□□□□ -1.49
RNU6-1228P-201ENST00000391014 DMRTA1Q5VZB9 504 aa5.74□□□□□ -1.49
RNU6-1228P-201ENST00000391014 ARHGAP33O14559 1287 aa5.73□□□□□ -1.49
RNU6-1228P-201ENST00000391014 PSEN2P49810 448 aa5.73□□□□□ -1.49
RNU6-1228P-201ENST00000391014 ADGRD1Q6QNK2 874 aa5.72□□□□□ -1.49
RNU6-1228P-201ENST00000391014 HRO43593 1189 aa5.7□□□□□ -1.5
RNU6-1228P-201ENST00000391014 DNAJC5Q9H3Z4 198 aa5.7□□□□□ -1.5
RNU6-1228P-201ENST00000391014 OXER1Q8TDS5 423 aa5.69□□□□□ -1.5
RNU6-1228P-201ENST00000391014 PSDA5PKW4 1024 aaPredicted RBP5.68□□□□□ -1.5
RNU6-1228P-201ENST00000391014 UPF1Q92900 1129 aaKnown RBP eCLIP5.68□□□□□ -1.5
RNU6-1228P-201ENST00000391014 CRISPLD2Q9H0B8 497 aa5.68□□□□□ -1.5
RNU6-1228P-201ENST00000391014 NCKAP5LQ9HCH0 1330 aa5.68□□□□□ -1.5
RNU6-1228P-201ENST00000391014 TK2O00142 265 aa5.66□□□□□ -1.5
RNU6-1228P-201ENST00000391014 TBC1D12O60347 775 aa5.66□□□□□ -1.5
RNU6-1228P-201ENST00000391014 PPP4R3BQ5MIZ7 849 aa5.66□□□□□ -1.5
RNU6-1228P-201ENST00000391014 GTPBP6O43824 516 aaPredicted RBP5.65□□□□□ -1.5
RNU6-1228P-201ENST00000391014 PPP1R15BQ5SWA1 713 aa5.65□□□□□ -1.5
RNU6-1228P-201ENST00000391014 KCNK17Q96T54 332 aa5.64□□□□□ -1.51
RNU6-1228P-201ENST00000391014 PLA2G2EQ9NZK7 142 aa5.64□□□□□ -1.51
RNU6-1228P-201ENST00000391014 HCSTQ9UBK5 93 aa5.64□□□□□ -1.51
RNU6-1228P-201ENST00000391014 ZNF454Q8N9F8 522 aa5.63□□□□□ -1.51
RNU6-1228P-201ENST00000391014 KCTD12Q96CX2 325 aaKnown RBP5.63□□□□□ -1.51
RNU6-1228P-201ENST00000391014 VPS9D1Q9Y2B5 631 aa5.63□□□□□ -1.51
RNU6-1228P-201ENST00000391014 PDE4AP27815 886 aa5.62□□□□□ -1.51
RNU6-1228P-201ENST00000391014 ANO8Q9HCE9 1232 aaPredicted RBP5.62□□□□□ -1.51
RNU6-1228P-201ENST00000391014 FOSBP53539 338 aa5.61□□□□□ -1.51
RNU6-1228P-201ENST00000391014 LARP6Q9BRS8 491 aaKnown RBP5.61□□□□□ -1.51
RNU6-1228P-201ENST00000391014 BHMG1C9JSJ3 638 aaPredicted RBP5.6□□□□□ -1.51
RNU6-1228P-201ENST00000391014 EVI5O60447 810 aa5.6□□□□□ -1.51
RNU6-1228P-201ENST00000391014 CADPS2Q86UW7 1296 aa5.6□□□□□ -1.51
RNU6-1228P-201ENST00000391014 BCL2L12Q9HB09 334 aa5.6□□□□□ -1.51
RNU6-1228P-201ENST00000391014 ADAM33Q9BZ11 813 aa5.59□□□□□ -1.51
RNU6-1228P-201ENST00000391014 EMILIN3Q9NT22 766 aa5.59□□□□□ -1.51
RNU6-1228P-201ENST00000391014 RYDENQ9NUL5 291 aaKnown RBP5.59□□□□□ -1.51
RNU6-1228P-201ENST00000391014 PTPN5P54829 565 aa5.58□□□□□ -1.52
RNU6-1228P-201ENST00000391014 MFSD10Q14728 455 aa5.58□□□□□ -1.52
RNU6-1228P-201ENST00000391014 ZBED2Q9BTP6 218 aa5.58□□□□□ -1.52
RNU6-1228P-201ENST00000391014 PTPREP23469 700 aa5.57□□□□□ -1.52
RNU6-1228P-201ENST00000391014 DDX27Q96GQ7 796 aaKnown RBP5.57□□□□□ -1.52
RNU6-1228P-201ENST00000391014 STAC3Q96MF2 364 aa5.57□□□□□ -1.52
RNU6-1228P-201ENST00000391014 SLC4A5Q9BY07 1137 aa5.57□□□□□ -1.52
RNU6-1228P-201ENST00000391014 ZDHHC16Q969W1 377 aa5.56□□□□□ -1.52
RNU6-1228P-201ENST00000391014 JPH4Q96JJ6 628 aa5.56□□□□□ -1.52
RNU6-1228P-201ENST00000391014 MAP3K9P80192 1104 aa5.55□□□□□ -1.52
RNU6-1228P-201ENST00000391014 KCNH8Q96L42 1107 aa5.55□□□□□ -1.52
RNU6-1228P-201ENST00000391014 PCDHGA10Q9Y5H3 936 aa5.55□□□□□ -1.52
RNU6-1228P-201ENST00000391014 THSD4Q6ZMP0 1018 aa5.54□□□□□ -1.52
RNU6-1228P-201ENST00000391014 DCAF8L2P0C7V8 631 aa5.53□□□□□ -1.52
RNU6-1228P-201ENST00000391014 COL9A1P20849 921 aa5.53□□□□□ -1.52
RNU6-1228P-201ENST00000391014 PROX2Q3B8N5 592 aa5.52□□□□□ -1.53
RNU6-1228P-201ENST00000391014 MRPL50Q8N5N7 158 aaKnown RBP5.52□□□□□ -1.53
RNU6-1228P-201ENST00000391014 WNT2BQ93097 391 aa5.52□□□□□ -1.53
RNU6-1228P-201ENST00000391014 GOLGA8CPA6NN73 597 aa5.49□□□□□ -1.53
RNU6-1228P-201ENST00000391014 PPP1R3GB7ZBB8 358 aa5.49□□□□□ -1.53
RNU6-1228P-201ENST00000391014 CAMK2BQ13554 666 aa5.49□□□□□ -1.53
RNU6-1228P-201ENST00000391014 DPYSL4O14531 572 aa5.48□□□□□ -1.53
RNU6-1228P-201ENST00000391014 PHF14O94880 888 aa5.48□□□□□ -1.53
RNU6-1228P-201ENST00000391014 TYW1BQ6NUM6 668 aa5.48□□□□□ -1.53
RNU6-1228P-201ENST00000391014 RABGEF1Q9UJ41 708 aa5.48□□□□□ -1.53
RNU6-1228P-201ENST00000391014 C6orf132Q5T0Z8 1188 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms