RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 POGZQ7Z3K3 1410 aa17.44■□□□□ 0.38
TRAV4-201ENST00000390426 MADDQ8WXG6 1647 aa17.43■□□□□ 0.38
TRAV4-201ENST00000390426 MLECQ14165 292 aa17.43■□□□□ 0.38
TRAV4-201ENST00000390426 ILDR1Q86SU0 546 aaPredicted RBP17.43■□□□□ 0.38
TRAV4-201ENST00000390426 CASKIN1Q8WXD9 1431 aa17.43■□□□□ 0.38
TRAV4-201ENST00000390426 MAGI2Q86UL8 1455 aa17.43■□□□□ 0.38
TRAV4-201ENST00000390426 LRRIQ1Q96JM4 1722 aa17.42■□□□□ 0.38
TRAV4-201ENST00000390426 PLPPR3Q6T4P5 718 aa17.42■□□□□ 0.38
TRAV4-201ENST00000390426 MYO5CQ9NQX4 1742 aa17.41■□□□□ 0.38
TRAV4-201ENST00000390426 PCF11O94913 1555 aaKnown RBP17.4■□□□□ 0.38
TRAV4-201ENST00000390426 ARHGAP5Q13017 1502 aa17.4■□□□□ 0.38
TRAV4-201ENST00000390426 AFAP1Q8N556 730 aa17.39■□□□□ 0.37
TRAV4-201ENST00000390426 MYT1LQ9UL68 1186 aa17.38■□□□□ 0.37
TRAV4-201ENST00000390426 RIMS1Q86UR5 1692 aaKnown RBP17.38■□□□□ 0.37
TRAV4-201ENST00000390426 SIGLEC1Q9BZZ2 1709 aa17.38■□□□□ 0.37
TRAV4-201ENST00000390426 CCDC18Q5T9S5 1454 aa17.37■□□□□ 0.37
TRAV4-201ENST00000390426 ATP10AO60312 1499 aa17.37■□□□□ 0.37
TRAV4-201ENST00000390426 ZNF518AQ6AHZ1 1483 aa17.34■□□□□ 0.37
TRAV4-201ENST00000390426 FYCO1Q9BQS8 1478 aa17.33■□□□□ 0.37
TRAV4-201ENST00000390426 C9orf84Q5VXU9 1444 aa17.33■□□□□ 0.36
TRAV4-201ENST00000390426 CDC42BPBQ9Y5S2 1711 aa17.31■□□□□ 0.36
TRAV4-201ENST00000390426 LMTK3Q96Q04 1460 aa17.31■□□□□ 0.36
TRAV4-201ENST00000390426 ARHGEF12Q9NZN5 1544 aa17.3■□□□□ 0.36
TRAV4-201ENST00000390426 TRAPPC8Q9Y2L5 1435 aa17.3■□□□□ 0.36
TRAV4-201ENST00000390426 KDM5CP41229 1560 aa17.29■□□□□ 0.36
TRAV4-201ENST00000390426 HSPA2P54652 639 aa17.29■□□□□ 0.36
TRAV4-201ENST00000390426 ZNF777Q9ULD5 760 aaPredicted RBP17.29■□□□□ 0.36
TRAV4-201ENST00000390426 PREX2Q70Z35 1606 aa17.29■□□□□ 0.36
TRAV4-201ENST00000390426 ABCC1P33527 1531 aa17.26■□□□□ 0.35
TRAV4-201ENST00000390426 FER1L4A9Z1Z3 1794 aa17.26■□□□□ 0.35
TRAV4-201ENST00000390426 CEBPAP49715 358 aaPredicted RBP17.26■□□□□ 0.35
TRAV4-201ENST00000390426 MLH3Q9UHC1 1453 aa17.25■□□□□ 0.35
TRAV4-201ENST00000390426 DIP2CQ9Y2E4 1556 aa17.25■□□□□ 0.35
TRAV4-201ENST00000390426 GPATCH8Q9UKJ3 1502 aaKnown RBP17.23■□□□□ 0.35
TRAV4-201ENST00000390426 HNRNPMP52272 730 aaKnown RBP eCLIP17.23■□□□□ 0.35
TRAV4-201ENST00000390426 CDC42BPAQ5VT25 1732 aa17.23■□□□□ 0.35
TRAV4-201ENST00000390426 ITSN2Q9NZM3 1697 aa17.22■□□□□ 0.35
TRAV4-201ENST00000390426 ABCA6Q8N139 1617 aa17.21■□□□□ 0.35
TRAV4-201ENST00000390426 MTUS2Q5JR59 1369 aa17.21■□□□□ 0.35
TRAV4-201ENST00000390426 CFDP1Q9UEE9 299 aaPredicted RBP17.21■□□□□ 0.35
TRAV4-201ENST00000390426 CCNB3Q8WWL7 1395 aa17.2■□□□□ 0.34
TRAV4-201ENST00000390426 CEP162Q5TB80 1403 aa17.19■□□□□ 0.34
TRAV4-201ENST00000390426 SAMD9LQ8IVG5 1584 aa17.19■□□□□ 0.34
TRAV4-201ENST00000390426 REREQ9P2R6 1566 aa17.19■□□□□ 0.34
TRAV4-201ENST00000390426 SPAG9O60271 1321 aaKnown RBP17.19■□□□□ 0.34
TRAV4-201ENST00000390426 ESF1Q9H501 851 aaKnown RBP17.18■□□□□ 0.34
TRAV4-201ENST00000390426 SYCP2Q9BX26 1530 aa17.17■□□□□ 0.34
TRAV4-201ENST00000390426 FBXO41Q8TF61 875 aa17.17■□□□□ 0.34
TRAV4-201ENST00000390426 KIDINS220Q9ULH0 1771 aa17.17■□□□□ 0.34
TRAV4-201ENST00000390426 AGLP35573 1532 aa17.16■□□□□ 0.34
TRAV4-201ENST00000390426 ZNF644Q9H582 1327 aaPredicted RBP17.14■□□□□ 0.33
TRAV4-201ENST00000390426 KIAA1107Q9UPP5 1409 aa17.13■□□□□ 0.33
TRAV4-201ENST00000390426 PLEKHH2Q8IVE3 1493 aa17.13■□□□□ 0.33
TRAV4-201ENST00000390426 LOC105371045A0A1W2PR82 267 aa17.13■□□□□ 0.33
TRAV4-201ENST00000390426 UHRF1BP1Q6BDS2 1440 aa17.11■□□□□ 0.33
TRAV4-201ENST00000390426 PREX1Q8TCU6 1659 aa17.1■□□□□ 0.33
TRAV4-201ENST00000390426 EHBP1L1Q8N3D4 1523 aa17.1■□□□□ 0.33
TRAV4-201ENST00000390426 ATP7AQ04656 1500 aa17.09■□□□□ 0.33
TRAV4-201ENST00000390426 TIAM1Q13009 1591 aa17.09■□□□□ 0.33
TRAV4-201ENST00000390426 C3P01024 1663 aa17.07■□□□□ 0.32
TRAV4-201ENST00000390426 CNTLNQ9NXG0 1405 aa17.07■□□□□ 0.32
TRAV4-201ENST00000390426 A2MP01023 1474 aa17.06■□□□□ 0.32
TRAV4-201ENST00000390426 SUPT6HQ7KZ85 1726 aaKnown RBP17.05■□□□□ 0.32
TRAV4-201ENST00000390426 GGT6Q6P531 493 aa17.05■□□□□ 0.32
TRAV4-201ENST00000390426 SETD1BQ9UPS6 1966 aaKnown RBP17.05■□□□□ 0.32
TRAV4-201ENST00000390426 INO80Q9ULG1 1556 aaPredicted RBP17.05■□□□□ 0.32
TRAV4-201ENST00000390426 MBD5Q9P267 1494 aa17.05■□□□□ 0.32
TRAV4-201ENST00000390426 ZMYM3Q14202 1370 aa17.04■□□□□ 0.32
TRAV4-201ENST00000390426 CERKQ8TCT0 537 aa17.04■□□□□ 0.32
TRAV4-201ENST00000390426 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
TRAV4-201ENST00000390426 NCOA2Q15596 1464 aa17.03■□□□□ 0.32
TRAV4-201ENST00000390426 PLXNC1O60486 1568 aa17.01■□□□□ 0.31
TRAV4-201ENST00000390426 VPS8Q8N3P4 1428 aa17■□□□□ 0.31
TRAV4-201ENST00000390426 STRCQ7RTU9 1775 aa17■□□□□ 0.31
TRAV4-201ENST00000390426 RTEL1-TNFRSF6BF6WH68 1400 aa16.98■□□□□ 0.31
TRAV4-201ENST00000390426 NPATQ14207 1427 aa16.98■□□□□ 0.31
TRAV4-201ENST00000390426 CAMSAP2Q08AD1 1489 aa16.98■□□□□ 0.31
TRAV4-201ENST00000390426 DHX29Q7Z478 1369 aaKnown RBP16.97■□□□□ 0.31
TRAV4-201ENST00000390426 MROH2AA6NES4 1674 aa16.97■□□□□ 0.31
TRAV4-201ENST00000390426 CLTCQ00610 1675 aaKnown RBP16.97■□□□□ 0.31
TRAV4-201ENST00000390426 RSPH4AQ5TD94 716 aa16.96■□□□□ 0.31
TRAV4-201ENST00000390426 PPP6R1Q9UPN7 881 aa16.96■□□□□ 0.31
TRAV4-201ENST00000390426 CCDC141Q6ZP82 1450 aa16.96■□□□□ 0.31
TRAV4-201ENST00000390426 ADGBQ8N7X0 1667 aa16.96■□□□□ 0.31
TRAV4-201ENST00000390426 LRRC9Q6ZRR7 1453 aa16.95■□□□□ 0.3
TRAV4-201ENST00000390426 KIF3BO15066 747 aa16.95■□□□□ 0.3
TRAV4-201ENST00000390426 KANK4Q5T7N3 995 aaPredicted RBP16.95■□□□□ 0.3
TRAV4-201ENST00000390426 PTPRTO14522 1441 aa16.95■□□□□ 0.3
TRAV4-201ENST00000390426 PTPRKQ15262 1439 aa16.94■□□□□ 0.3
TRAV4-201ENST00000390426 TSPY4P0CV99 314 aa16.93■□□□□ 0.3
TRAV4-201ENST00000390426 TSPY10P0CW01 314 aa16.93■□□□□ 0.3
TRAV4-201ENST00000390426 NCOA1Q15788 1441 aa16.93■□□□□ 0.3
TRAV4-201ENST00000390426 NCKAP5LQ9HCH0 1330 aa16.92■□□□□ 0.3
TRAV4-201ENST00000390426 CAMSAP1Q5T5Y3 1602 aa16.91■□□□□ 0.3
TRAV4-201ENST00000390426 FBXO31Q5XUX0 539 aaPredicted RBP16.88■□□□□ 0.29
TRAV4-201ENST00000390426 ARHGEF5Q12774 1597 aa16.88■□□□□ 0.29
TRAV4-201ENST00000390426 MAP3K1Q13233 1512 aa16.87■□□□□ 0.29
TRAV4-201ENST00000390426 WASHC2CQ9Y4E1 1318 aa16.87■□□□□ 0.29
TRAV4-201ENST00000390426 MYO3AQ8NEV4 1616 aa16.86■□□□□ 0.29
TRAV4-201ENST00000390426 APLP2Q06481 763 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms