RNA–Protein interactions for RNA: ENST00000390353.2

TRBV6-1-201, Transcript of T cell receptor beta variable 6-1, humanhuman

APPRIS P1 BASIC

Gene TRBV6-1, Length 401 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1-201ENST00000390353 RICTORQ6R327 1708 aa13.54□□□□□ -0.24
TRBV6-1-201ENST00000390353 ZNF518AQ6AHZ1 1483 aa13.54□□□□□ -0.24
TRBV6-1-201ENST00000390353 KIF14Q15058 1648 aa13.53□□□□□ -0.24
TRBV6-1-201ENST00000390353 YEATS2Q9ULM3 1422 aa13.53□□□□□ -0.24
TRBV6-1-201ENST00000390353 ATP10AO60312 1499 aa13.53□□□□□ -0.24
TRBV6-1-201ENST00000390353 CCDC18Q5T9S5 1454 aa13.53□□□□□ -0.24
TRBV6-1-201ENST00000390353 PCF11O94913 1555 aaKnown RBP13.53□□□□□ -0.24
TRBV6-1-201ENST00000390353 MADDQ8WXG6 1647 aa13.53□□□□□ -0.24
TRBV6-1-201ENST00000390353 C9orf84Q5VXU9 1444 aa13.52□□□□□ -0.25
TRBV6-1-201ENST00000390353 ARHGAP5Q13017 1502 aa13.51□□□□□ -0.25
TRBV6-1-201ENST00000390353 CASKIN1Q8WXD9 1431 aa13.51□□□□□ -0.25
TRBV6-1-201ENST00000390353 MYT1LQ9UL68 1186 aa13.51□□□□□ -0.25
TRBV6-1-201ENST00000390353 MLECQ14165 292 aa13.5□□□□□ -0.25
TRBV6-1-201ENST00000390353 FBXO41Q8TF61 875 aa13.5□□□□□ -0.25
TRBV6-1-201ENST00000390353 LMTK3Q96Q04 1460 aa13.49□□□□□ -0.25
TRBV6-1-201ENST00000390353 MYO5CQ9NQX4 1742 aa13.47□□□□□ -0.25
TRBV6-1-201ENST00000390353 PLPPR3Q6T4P5 718 aa13.47□□□□□ -0.25
TRBV6-1-201ENST00000390353 AFAP1Q8N556 730 aa13.46□□□□□ -0.25
TRBV6-1-201ENST00000390353 ESF1Q9H501 851 aaKnown RBP13.46□□□□□ -0.25
TRBV6-1-201ENST00000390353 FYCO1Q9BQS8 1478 aa13.46□□□□□ -0.25
TRBV6-1-201ENST00000390353 RIMS1Q86UR5 1692 aaKnown RBP13.45□□□□□ -0.26
TRBV6-1-201ENST00000390353 ARHGEF12Q9NZN5 1544 aa13.44□□□□□ -0.26
TRBV6-1-201ENST00000390353 MLH3Q9UHC1 1453 aa13.43□□□□□ -0.26
TRBV6-1-201ENST00000390353 KDM5CP41229 1560 aa13.43□□□□□ -0.26
TRBV6-1-201ENST00000390353 HSPA2P54652 639 aa13.42□□□□□ -0.26
TRBV6-1-201ENST00000390353 DMRT2Q9Y5R5 561 aa13.42□□□□□ -0.26
TRBV6-1-201ENST00000390353 REREQ9P2R6 1566 aa13.4□□□□□ -0.26
TRBV6-1-201ENST00000390353 PLEKHH2Q8IVE3 1493 aa13.38□□□□□ -0.27
TRBV6-1-201ENST00000390353 ZNF777Q9ULD5 760 aaPredicted RBP13.38□□□□□ -0.27
TRBV6-1-201ENST00000390353 PREX2Q70Z35 1606 aa13.38□□□□□ -0.27
TRBV6-1-201ENST00000390353 ABCC1P33527 1531 aa13.38□□□□□ -0.27
TRBV6-1-201ENST00000390353 AGLP35573 1532 aa13.38□□□□□ -0.27
TRBV6-1-201ENST00000390353 UHRF1BP1Q6BDS2 1440 aa13.38□□□□□ -0.27
TRBV6-1-201ENST00000390353 CNTLNQ9NXG0 1405 aa13.38□□□□□ -0.27
TRBV6-1-201ENST00000390353 FER1L4A9Z1Z3 1794 aa13.37□□□□□ -0.27
TRBV6-1-201ENST00000390353 CFDP1Q9UEE9 299 aaPredicted RBP13.37□□□□□ -0.27
TRBV6-1-201ENST00000390353 TRAPPC8Q9Y2L5 1435 aa13.37□□□□□ -0.27
TRBV6-1-201ENST00000390353 SPAG9O60271 1321 aaKnown RBP13.37□□□□□ -0.27
TRBV6-1-201ENST00000390353 MTUS2Q5JR59 1369 aa13.36□□□□□ -0.27
TRBV6-1-201ENST00000390353 CCNB3Q8WWL7 1395 aa13.36□□□□□ -0.27
TRBV6-1-201ENST00000390353 CEBPAP49715 358 aaPredicted RBP13.36□□□□□ -0.27
TRBV6-1-201ENST00000390353 KIAA1107Q9UPP5 1409 aa13.36□□□□□ -0.27
TRBV6-1-201ENST00000390353 DIP2CQ9Y2E4 1556 aa13.36□□□□□ -0.27
TRBV6-1-201ENST00000390353 SIGLEC1Q9BZZ2 1709 aa13.34□□□□□ -0.27
TRBV6-1-201ENST00000390353 GPATCH8Q9UKJ3 1502 aaKnown RBP13.34□□□□□ -0.27
TRBV6-1-201ENST00000390353 CERKQ8TCT0 537 aa13.33□□□□□ -0.28
TRBV6-1-201ENST00000390353 CDC42BPBQ9Y5S2 1711 aa13.32□□□□□ -0.28
TRBV6-1-201ENST00000390353 ABCA6Q8N139 1617 aa13.31□□□□□ -0.28
TRBV6-1-201ENST00000390353 PREX1Q8TCU6 1659 aa13.31□□□□□ -0.28
TRBV6-1-201ENST00000390353 LRRIQ1Q96JM4 1722 aa13.3□□□□□ -0.28
TRBV6-1-201ENST00000390353 HNRNPMP52272 730 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRBV6-1-201ENST00000390353 PPP6R1Q9UPN7 881 aa13.3□□□□□ -0.28
TRBV6-1-201ENST00000390353 ITSN2Q9NZM3 1697 aa13.3□□□□□ -0.28
TRBV6-1-201ENST00000390353 SYCP2Q9BX26 1530 aa13.29□□□□□ -0.28
TRBV6-1-201ENST00000390353 SAMD9LQ8IVG5 1584 aa13.29□□□□□ -0.28
TRBV6-1-201ENST00000390353 NPATQ14207 1427 aa13.29□□□□□ -0.28
TRBV6-1-201ENST00000390353 CDC42BPAQ5VT25 1732 aa13.27□□□□□ -0.29
TRBV6-1-201ENST00000390353 PTPRTO14522 1441 aa13.26□□□□□ -0.29
TRBV6-1-201ENST00000390353 A2MP01023 1474 aa13.26□□□□□ -0.29
TRBV6-1-201ENST00000390353 ATP7AQ04656 1500 aa13.26□□□□□ -0.29
TRBV6-1-201ENST00000390353 RSPH4AQ5TD94 716 aa13.26□□□□□ -0.29
TRBV6-1-201ENST00000390353 EHBP1L1Q8N3D4 1523 aa13.26□□□□□ -0.29
TRBV6-1-201ENST00000390353 KIDINS220Q9ULH0 1771 aa13.25□□□□□ -0.29
TRBV6-1-201ENST00000390353 CEP162Q5TB80 1403 aa13.25□□□□□ -0.29
TRBV6-1-201ENST00000390353 ZMYM3Q14202 1370 aa13.25□□□□□ -0.29
TRBV6-1-201ENST00000390353 SETD1BQ9UPS6 1966 aaKnown RBP13.25□□□□□ -0.29
TRBV6-1-201ENST00000390353 RTEL1-TNFRSF6BF6WH68 1400 aa13.23□□□□□ -0.29
TRBV6-1-201ENST00000390353 GGT6Q6P531 493 aa13.23□□□□□ -0.29
TRBV6-1-201ENST00000390353 INO80Q9ULG1 1556 aaPredicted RBP13.21□□□□□ -0.29
TRBV6-1-201ENST00000390353 C3P01024 1663 aa13.21□□□□□ -0.3
TRBV6-1-201ENST00000390353 NCOA1Q15788 1441 aa13.21□□□□□ -0.3
TRBV6-1-201ENST00000390353 PLXNC1O60486 1568 aa13.2□□□□□ -0.3
TRBV6-1-201ENST00000390353 MROH2AA6NES4 1674 aa13.2□□□□□ -0.3
TRBV6-1-201ENST00000390353 ZNF644Q9H582 1327 aaPredicted RBP13.19□□□□□ -0.3
TRBV6-1-201ENST00000390353 MBD5Q9P267 1494 aa13.19□□□□□ -0.3
TRBV6-1-201ENST00000390353 PKD2Q13563 968 aa13.19□□□□□ -0.3
TRBV6-1-201ENST00000390353 DHX29Q7Z478 1369 aaKnown RBP13.19□□□□□ -0.3
TRBV6-1-201ENST00000390353 TSPY4P0CV99 314 aa13.18□□□□□ -0.3
TRBV6-1-201ENST00000390353 TSPY10P0CW01 314 aa13.18□□□□□ -0.3
TRBV6-1-201ENST00000390353 TIAM1Q13009 1591 aa13.18□□□□□ -0.3
TRBV6-1-201ENST00000390353 NCOA2Q15596 1464 aa13.17□□□□□ -0.3
TRBV6-1-201ENST00000390353 CCDC141Q6ZP82 1450 aa13.17□□□□□ -0.3
TRBV6-1-201ENST00000390353 PTPRKQ15262 1439 aa13.16□□□□□ -0.3
TRBV6-1-201ENST00000390353 FAM135AQ9P2D6 1515 aa13.16□□□□□ -0.3
TRBV6-1-201ENST00000390353 PLA2R1Q13018 1463 aa13.16□□□□□ -0.3
TRBV6-1-201ENST00000390353 IQSEC2Q5JU85 1478 aa13.16□□□□□ -0.3
TRBV6-1-201ENST00000390353 ADGBQ8N7X0 1667 aa13.15□□□□□ -0.31
TRBV6-1-201ENST00000390353 WASHC2CQ9Y4E1 1318 aa13.14□□□□□ -0.31
TRBV6-1-201ENST00000390353 CAMSAP1Q5T5Y3 1602 aa13.14□□□□□ -0.31
TRBV6-1-201ENST00000390353 SUPT6HQ7KZ85 1726 aaKnown RBP13.14□□□□□ -0.31
TRBV6-1-201ENST00000390353 KIF3BO15066 747 aa13.14□□□□□ -0.31
TRBV6-1-201ENST00000390353 CAMSAP2Q08AD1 1489 aa13.14□□□□□ -0.31
TRBV6-1-201ENST00000390353 STRCQ7RTU9 1775 aa13.14□□□□□ -0.31
TRBV6-1-201ENST00000390353 VPS8Q8N3P4 1428 aa13.13□□□□□ -0.31
TRBV6-1-201ENST00000390353 NCKAP5LQ9HCH0 1330 aa13.12□□□□□ -0.31
TRBV6-1-201ENST00000390353 CEP170BQ9Y4F5 1589 aaPredicted RBP13.11□□□□□ -0.31
TRBV6-1-201ENST00000390353 A2ML1A8K2U0 1454 aa13.1□□□□□ -0.31
TRBV6-1-201ENST00000390353 TNRQ92752 1358 aa13.1□□□□□ -0.31
TRBV6-1-201ENST00000390353 KDM5DQ9BY66 1539 aa13.1□□□□□ -0.31
TRBV6-1-201ENST00000390353 CLTCQ00610 1675 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms