RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 TPRNQ4KMQ1 711 aa11.05□□□□□ -0.64
PKP4-202ENST00000389759 PRKRIP1Q9H875 184 aaPredicted RBP11.05□□□□□ -0.64
PKP4-202ENST00000389759 GSE1Q14687 1217 aa11.04□□□□□ -0.64
PKP4-202ENST00000389759 CUX2O14529 1486 aa11.04□□□□□ -0.64
PKP4-202ENST00000389759 GBP4Q96PP9 640 aa11.04□□□□□ -0.64
PKP4-202ENST00000389759 PKD2Q13563 968 aa11.03□□□□□ -0.64
PKP4-202ENST00000389759 NLRP13Q86W25 1043 aa11.03□□□□□ -0.64
PKP4-202ENST00000389759 FMN1Q68DA7 1419 aa11.03□□□□□ -0.64
PKP4-202ENST00000389759 RSPH6AQ9H0K4 717 aa11.03□□□□□ -0.64
PKP4-202ENST00000389759 ZRSR1Q15695 479 aaKnown RBP11.01□□□□□ -0.65
PKP4-202ENST00000389759 U2SURPO15042 1029 aaKnown RBP11□□□□□ -0.65
PKP4-202ENST00000389759 NPM1P06748 294 aaKnown RBP eCLIP11□□□□□ -0.65
PKP4-202ENST00000389759 PTMSP20962 102 aa11□□□□□ -0.65
PKP4-202ENST00000389759 CHAF1AQ13111 956 aaPredicted RBP11□□□□□ -0.65
PKP4-202ENST00000389759 RWDD1Q9H446 243 aaPredicted RBP11□□□□□ -0.65
PKP4-202ENST00000389759 CDK11BP21127 795 aaKnown RBP11□□□□□ -0.65
PKP4-202ENST00000389759 GOLGA2Q08379 1002 aa10.99□□□□□ -0.65
PKP4-202ENST00000389759 EXOC6Q8TAG9 804 aa10.99□□□□□ -0.65
PKP4-202ENST00000389759 RAPGEF2Q9Y4G8 1499 aa10.99□□□□□ -0.65
PKP4-202ENST00000389759 SLC4A3P48751 1232 aa10.98□□□□□ -0.65
PKP4-202ENST00000389759 HSP90AA2PQ14568 343 aaPredicted RBP10.98□□□□□ -0.65
PKP4-202ENST00000389759 SENP3Q9H4L4 574 aaPredicted RBP10.98□□□□□ -0.65
PKP4-202ENST00000389759 ROCK2O75116 1388 aaKnown RBP10.98□□□□□ -0.65
PKP4-202ENST00000389759 RRP1P56182 461 aaKnown RBP10.98□□□□□ -0.65
PKP4-202ENST00000389759 FAM161AQ3B820 660 aa10.97□□□□□ -0.65
PKP4-202ENST00000389759 PMFBP1Q8TBY8 1022 aa10.97□□□□□ -0.65
PKP4-202ENST00000389759 CFAP44Q96MT7 982 aa10.97□□□□□ -0.65
PKP4-202ENST00000389759 CENPQQ7L2Z9 268 aaPredicted RBP10.96□□□□□ -0.65
PKP4-202ENST00000389759 MORC1Q86VD1 984 aa10.96□□□□□ -0.66
PKP4-202ENST00000389759 RUSC2Q8N2Y8 1516 aa10.95□□□□□ -0.66
PKP4-202ENST00000389759 MFAP1P55081 439 aaKnown RBP10.95□□□□□ -0.66
PKP4-202ENST00000389759 MYBBP1AQ9BQG0 1328 aaKnown RBP10.94□□□□□ -0.66
PKP4-202ENST00000389759 IPO8O15397 1037 aaKnown RBP10.94□□□□□ -0.66
PKP4-202ENST00000389759 KIAA2012Q0VF49 1180 aa10.94□□□□□ -0.66
PKP4-202ENST00000389759 NRDCO43847 1150 aa10.93□□□□□ -0.66
PKP4-202ENST00000389759 KIF15Q9NS87 1388 aa10.93□□□□□ -0.66
PKP4-202ENST00000389759 PLIN1O60240 522 aa10.93□□□□□ -0.66
PKP4-202ENST00000389759 ARID3AQ99856 593 aa10.93□□□□□ -0.66
PKP4-202ENST00000389759 GOLGA6L4A6NEF3 574 aa10.93□□□□□ -0.66
PKP4-202ENST00000389759 VSIG10Q8N0Z9 540 aa10.93□□□□□ -0.66
PKP4-202ENST00000389759 PHLDB1Q86UU1 1377 aa10.93□□□□□ -0.66
PKP4-202ENST00000389759 MCCP23508 829 aa10.92□□□□□ -0.66
PKP4-202ENST00000389759 NUP155O75694 1391 aa10.92□□□□□ -0.66
PKP4-202ENST00000389759 GOLGA6L6A8MZA4 724 aa10.91□□□□□ -0.66
PKP4-202ENST00000389759 ITPRIPQ8IWB1 547 aa10.91□□□□□ -0.66
PKP4-202ENST00000389759 CALD1Q05682 793 aaKnown RBP10.91□□□□□ -0.66
PKP4-202ENST00000389759 CRBNQ96SW2 442 aa10.91□□□□□ -0.66
PKP4-202ENST00000389759 CENPJQ9HC77 1338 aaPredicted RBP10.91□□□□□ -0.66
PKP4-202ENST00000389759 CLUAP1Q96AJ1 413 aa10.91□□□□□ -0.66
PKP4-202ENST00000389759 DDX11L8A8MPP1 907 aa10.9□□□□□ -0.66
PKP4-202ENST00000389759 WIZO95785 1651 aa10.9□□□□□ -0.67
PKP4-202ENST00000389759 ST20-MTHFSA0A0A6YYL1 179 aa10.89□□□□□ -0.67
PKP4-202ENST00000389759 POGKQ9P215 609 aa10.89□□□□□ -0.67
PKP4-202ENST00000389759 TOP2AP11388 1531 aaKnown RBP10.89□□□□□ -0.67
PKP4-202ENST00000389759 U2AF1L5P0DN76 240 aaPredicted RBP10.89□□□□□ -0.67
PKP4-202ENST00000389759 KCNJ4P48050 445 aa10.89□□□□□ -0.67
PKP4-202ENST00000389759 U2AF1Q01081 240 aaKnown RBP eCLIP10.89□□□□□ -0.67
PKP4-202ENST00000389759 ZBTB7CA1YPR0 619 aa10.89□□□□□ -0.67
PKP4-202ENST00000389759 NFKBIBQ15653 356 aa10.88□□□□□ -0.67
PKP4-202ENST00000389759 HAP1P54257 671 aaPredicted RBP10.88□□□□□ -0.67
PKP4-202ENST00000389759 SYAP1Q96A49 352 aaPredicted RBP10.88□□□□□ -0.67
PKP4-202ENST00000389759 DRC7Q8IY82 874 aa10.87□□□□□ -0.67
PKP4-202ENST00000389759 CCDC146Q8IYE0 955 aa10.87□□□□□ -0.67
PKP4-202ENST00000389759 FHOD3Q2V2M9 1422 aa10.87□□□□□ -0.67
PKP4-202ENST00000389759 FGD1P98174 961 aa10.87□□□□□ -0.67
PKP4-202ENST00000389759 ANKRD30AQ9BXX3 1397 aa10.87□□□□□ -0.67
PKP4-202ENST00000389759 SMC4Q9NTJ3 1288 aa10.87□□□□□ -0.67
PKP4-202ENST00000389759 PAK3O75914 559 aaPredicted RBP10.86□□□□□ -0.67
PKP4-202ENST00000389759 EIF4G1Q04637 1599 aaKnown RBP10.86□□□□□ -0.67
PKP4-202ENST00000389759 APBB1O00213 710 aa10.86□□□□□ -0.67
PKP4-202ENST00000389759 OS9Q13438 667 aaPredicted RBP10.86□□□□□ -0.67
PKP4-202ENST00000389759 CGNL1Q0VF96 1302 aa10.85□□□□□ -0.67
PKP4-202ENST00000389759 ANO8Q9HCE9 1232 aaPredicted RBP10.85□□□□□ -0.67
PKP4-202ENST00000389759 CCDC18Q5T9S5 1454 aa10.85□□□□□ -0.67
PKP4-202ENST00000389759 FOXD4L1Q9NU39 408 aa10.85□□□□□ -0.67
PKP4-202ENST00000389759 IL27Q8NEV9 243 aa10.84□□□□□ -0.67
PKP4-202ENST00000389759 USP47Q96K76 1375 aa10.84□□□□□ -0.67
PKP4-202ENST00000389759 CCDC7Q96M83 1385 aa10.84□□□□□ -0.67
PKP4-202ENST00000389759 PLPPR3Q6T4P5 718 aa10.84□□□□□ -0.67
PKP4-202ENST00000389759 C14orf37Q86TY3 774 aa10.84□□□□□ -0.67
PKP4-202ENST00000389759 SRPK2P78362 688 aaKnown RBP10.84□□□□□ -0.67
PKP4-202ENST00000389759 DDX49Q9Y6V7 483 aaKnown RBP10.84□□□□□ -0.67
PKP4-202ENST00000389759 SKOR2Q2VWA4 1001 aaPredicted RBP10.83□□□□□ -0.68
PKP4-202ENST00000389759 PANK3Q9H999 370 aa10.83□□□□□ -0.68
PKP4-202ENST00000389759 AMER1Q5JTC6 1135 aaPredicted RBP10.83□□□□□ -0.68
PKP4-202ENST00000389759 WASHC2AQ641Q2 1341 aa10.82□□□□□ -0.68
PKP4-202ENST00000389759 KIF7Q2M1P5 1343 aa10.82□□□□□ -0.68
PKP4-202ENST00000389759 CNTLNQ9NXG0 1405 aa10.82□□□□□ -0.68
PKP4-202ENST00000389759 E9PSI1 815 aa10.82□□□□□ -0.68
PKP4-202ENST00000389759 BRPF3Q9ULD4 1205 aa10.82□□□□□ -0.68
PKP4-202ENST00000389759 COG6Q9Y2V7 657 aa10.82□□□□□ -0.68
PKP4-202ENST00000389759 CHMP5Q9NZZ3 219 aa10.81□□□□□ -0.68
PKP4-202ENST00000389759 KANK1Q14678 1352 aa10.81□□□□□ -0.68
PKP4-202ENST00000389759 KIAA1211Q6ZU35 1233 aa10.81□□□□□ -0.68
PKP4-202ENST00000389759 SAFB2Q14151 953 aaKnown RBP eCLIP10.8□□□□□ -0.68
PKP4-202ENST00000389759 NAP1L2Q9ULW6 460 aaPredicted RBP10.8□□□□□ -0.68
PKP4-202ENST00000389759 ST18O60284 1047 aa10.79□□□□□ -0.68
PKP4-202ENST00000389759 BCL2L13Q9BXK5 485 aa10.79□□□□□ -0.68
PKP4-202ENST00000389759 MSH5O43196 834 aa10.78□□□□□ -0.68
PKP4-202ENST00000389759 APAF1O14727 1248 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms