RNA–Protein interactions for RNA: ENST00000389398.9

VWA3A-202, Transcript of von Willebrand factor A domain containing 3A, humanhuman

APPRIS P2 TSL 5 BASIC

Gene VWA3A, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-202ENST00000389398 CEP164Q9UPV0 1460 aa10.12□□□□□ -0.79
VWA3A-202ENST00000389398 A0A0G2JS52 829 aa10.11□□□□□ -0.79
VWA3A-202ENST00000389398 NOC3LQ8WTT2 800 aaKnown RBP10.11□□□□□ -0.79
VWA3A-202ENST00000389398 CUX2O14529 1486 aa10.11□□□□□ -0.79
VWA3A-202ENST00000389398 IL27Q8NEV9 243 aa10.09□□□□□ -0.79
VWA3A-202ENST00000389398 CALD1Q05682 793 aaKnown RBP10.09□□□□□ -0.79
VWA3A-202ENST00000389398 TAF3Q5VWG9 929 aa10.08□□□□□ -0.8
VWA3A-202ENST00000389398 SPRYD3Q8NCJ5 442 aa10.08□□□□□ -0.8
VWA3A-202ENST00000389398 DCAF8L1A6NGE4 600 aa10.08□□□□□ -0.8
VWA3A-202ENST00000389398 ZMYND15Q9H091 742 aa10.08□□□□□ -0.8
VWA3A-202ENST00000389398 EIF4G2P78344 907 aaKnown RBP eCLIP10.07□□□□□ -0.8
VWA3A-202ENST00000389398 CCER2I3L3R5 266 aa10.07□□□□□ -0.8
VWA3A-202ENST00000389398 PATL2C9JE40 543 aaKnown RBP10.06□□□□□ -0.8
VWA3A-202ENST00000389398 DDX11L8A8MPP1 907 aa10.06□□□□□ -0.8
VWA3A-202ENST00000389398 NESP48681 1621 aa10.06□□□□□ -0.8
VWA3A-202ENST00000389398 HAP1P54257 671 aaPredicted RBP10.06□□□□□ -0.8
VWA3A-202ENST00000389398 PLEKHG5O94827 1062 aa10.05□□□□□ -0.8
VWA3A-202ENST00000389398 CWC15Q9P013 229 aaKnown RBP10.05□□□□□ -0.8
VWA3A-202ENST00000389398 HIRIP3Q9BW71 556 aaPredicted RBP10.05□□□□□ -0.8
VWA3A-202ENST00000389398 CHGAP10645 457 aaKnown RBP10.04□□□□□ -0.8
VWA3A-202ENST00000389398 PDIA4P13667 645 aaKnown RBP10.04□□□□□ -0.8
VWA3A-202ENST00000389398 CFAP44Q96MT7 982 aa10.04□□□□□ -0.8
VWA3A-202ENST00000389398 PLEKHD1A6NEE1 506 aa10.03□□□□□ -0.8
VWA3A-202ENST00000389398 FOXD1Q16676 465 aa10.03□□□□□ -0.8
VWA3A-202ENST00000389398 SKOR2Q2VWA4 1001 aaPredicted RBP10.03□□□□□ -0.8
VWA3A-202ENST00000389398 FTSJ3Q8IY81 847 aaKnown RBP10.02□□□□□ -0.81
VWA3A-202ENST00000389398 JPH4Q96JJ6 628 aa10.02□□□□□ -0.81
VWA3A-202ENST00000389398 PIP4K2BP78356 416 aa10.02□□□□□ -0.81
VWA3A-202ENST00000389398 PHF14O94880 888 aa10.01□□□□□ -0.81
VWA3A-202ENST00000389398 BRPF3Q9ULD4 1205 aa10.01□□□□□ -0.81
VWA3A-202ENST00000389398 DISP3Q9P2K9 1392 aa10.01□□□□□ -0.81
VWA3A-202ENST00000389398 CHMP4BQ9H444 224 aaKnown RBP10□□□□□ -0.81
VWA3A-202ENST00000389398 MS4A1P11836 297 aa10□□□□□ -0.81
VWA3A-202ENST00000389398 RDXP35241 583 aaKnown RBP10□□□□□ -0.81
VWA3A-202ENST00000389398 MEX3CQ5U5Q3 659 aaKnown RBP10□□□□□ -0.81
VWA3A-202ENST00000389398 STK11IPQ8N1F8 1099 aa10□□□□□ -0.81
VWA3A-202ENST00000389398 BBXQ8WY36 941 aaPredicted RBP10□□□□□ -0.81
VWA3A-202ENST00000389398 R3HCC1Q9Y3T6 440 aaKnown RBP9.99□□□□□ -0.81
VWA3A-202ENST00000389398 SOGA1O94964 1423 aa9.98□□□□□ -0.81
VWA3A-202ENST00000389398 TSPYL1Q9H0U9 437 aa9.98□□□□□ -0.81
VWA3A-202ENST00000389398 ATAD2BQ9ULI0 1458 aa9.98□□□□□ -0.81
VWA3A-202ENST00000389398 TAF7LQ5H9L4 462 aa9.98□□□□□ -0.81
VWA3A-202ENST00000389398 DIAPH3Q9NSV4 1193 aa9.98□□□□□ -0.81
VWA3A-202ENST00000389398 RSF1Q96T23 1441 aaPredicted RBP9.98□□□□□ -0.81
VWA3A-202ENST00000389398 PPP1R15AO75807 674 aaPredicted RBP9.98□□□□□ -0.81
VWA3A-202ENST00000389398 FANCD2Q9BXW9 1451 aa9.97□□□□□ -0.81
VWA3A-202ENST00000389398 DEF6Q9H4E7 631 aa9.97□□□□□ -0.81
VWA3A-202ENST00000389398 MRE11P49959 708 aa9.96□□□□□ -0.81
VWA3A-202ENST00000389398 HMGN5P82970 282 aaKnown RBP9.96□□□□□ -0.81
VWA3A-202ENST00000389398 MCCP23508 829 aa9.96□□□□□ -0.81
VWA3A-202ENST00000389398 TPM4P67936 248 aa9.96□□□□□ -0.81
VWA3A-202ENST00000389398 DDX49Q9Y6V7 483 aaKnown RBP9.96□□□□□ -0.82
VWA3A-202ENST00000389398 ARGLU1Q9NWB6 273 aaPredicted RBP9.95□□□□□ -0.82
VWA3A-202ENST00000389398 MRC2Q9UBG0 1479 aa9.95□□□□□ -0.82
VWA3A-202ENST00000389398 AEBP1Q8IUX7 1158 aa9.95□□□□□ -0.82
VWA3A-202ENST00000389398 H0YHG0 523 aa9.94□□□□□ -0.82
VWA3A-202ENST00000389398 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.94□□□□□ -0.82
VWA3A-202ENST00000389398 PDE4AP27815 886 aa9.94□□□□□ -0.82
VWA3A-202ENST00000389398 RBM10P98175 930 aaKnown RBP9.94□□□□□ -0.82
VWA3A-202ENST00000389398 USP8P40818 1118 aa9.94□□□□□ -0.82
VWA3A-202ENST00000389398 MAPK8IP2Q13387 824 aaPredicted RBP9.93□□□□□ -0.82
VWA3A-202ENST00000389398 PDCL3Q9H2J4 239 aa9.93□□□□□ -0.82
VWA3A-202ENST00000389398 NFKBIBQ15653 356 aa9.93□□□□□ -0.82
VWA3A-202ENST00000389398 RRP12Q5JTH9 1297 aaKnown RBP9.93□□□□□ -0.82
VWA3A-202ENST00000389398 FRAT1Q92837 279 aaPredicted RBP9.93□□□□□ -0.82
VWA3A-202ENST00000389398 SENP3-EIF4A1A0A087X0R7 540 aa9.93□□□□□ -0.82
VWA3A-202ENST00000389398 FGD1P98174 961 aa9.93□□□□□ -0.82
VWA3A-202ENST00000389398 CCDC191Q8NCU4 936 aa9.93□□□□□ -0.82
VWA3A-202ENST00000389398 NEFHP12036 1026 aa9.92□□□□□ -0.82
VWA3A-202ENST00000389398 GNL2Q13823 731 aaKnown RBP9.92□□□□□ -0.82
VWA3A-202ENST00000389398 HSP90AB3PQ58FF7 597 aa9.92□□□□□ -0.82
VWA3A-202ENST00000389398 CC2D1BQ5T0F9 858 aaKnown RBP9.92□□□□□ -0.82
VWA3A-202ENST00000389398 TPM3P06753 285 aa9.91□□□□□ -0.82
VWA3A-202ENST00000389398 DMRT2Q9Y5R5 561 aa9.91□□□□□ -0.82
VWA3A-202ENST00000389398 NCAPD3P42695 1498 aa9.91□□□□□ -0.82
VWA3A-202ENST00000389398 UBAP1LF5GYI3 381 aa9.91□□□□□ -0.82
VWA3A-202ENST00000389398 ACBD3Q9H3P7 528 aa9.91□□□□□ -0.82
VWA3A-202ENST00000389398 HSP90B2PQ58FF3 399 aa9.91□□□□□ -0.82
VWA3A-202ENST00000389398 BAZ1AQ9NRL2 1556 aaPredicted RBP9.9□□□□□ -0.82
VWA3A-202ENST00000389398 CCAR2Q8N163 923 aaKnown RBP9.9□□□□□ -0.82
VWA3A-202ENST00000389398 ZNF592Q92610 1267 aa9.9□□□□□ -0.82
VWA3A-202ENST00000389398 CARMIL2Q6F5E8 1435 aa9.9□□□□□ -0.82
VWA3A-202ENST00000389398 IRX3P78415 501 aaPredicted RBP9.9□□□□□ -0.83
VWA3A-202ENST00000389398 SLC4A3P48751 1232 aa9.89□□□□□ -0.83
VWA3A-202ENST00000389398 ILDR1Q86SU0 546 aaPredicted RBP9.89□□□□□ -0.83
VWA3A-202ENST00000389398 KCNJ4P48050 445 aa9.89□□□□□ -0.83
VWA3A-202ENST00000389398 LEKR1Q6ZMV7 388 aa9.88□□□□□ -0.83
VWA3A-202ENST00000389398 RCAN3Q9UKA8 241 aa9.88□□□□□ -0.83
VWA3A-202ENST00000389398 AQRO60306 1485 aaKnown RBP eCLIP9.88□□□□□ -0.83
VWA3A-202ENST00000389398 HMMRO75330 724 aa9.88□□□□□ -0.83
VWA3A-202ENST00000389398 CCDC70Q6NSX1 233 aa9.88□□□□□ -0.83
VWA3A-202ENST00000389398 KIAA1211Q6ZU35 1233 aa9.88□□□□□ -0.83
VWA3A-202ENST00000389398 FAM161AQ3B820 660 aa9.87□□□□□ -0.83
VWA3A-202ENST00000389398 CCDC39Q9UFE4 941 aa9.87□□□□□ -0.83
VWA3A-202ENST00000389398 GGT6Q6P531 493 aa9.87□□□□□ -0.83
VWA3A-202ENST00000389398 CCDC9Q9Y3X0 531 aaKnown RBP9.87□□□□□ -0.83
VWA3A-202ENST00000389398 KIF16BQ96L93 1317 aa9.87□□□□□ -0.83
VWA3A-202ENST00000389398 CHMP5Q9NZZ3 219 aa9.86□□□□□ -0.83
VWA3A-202ENST00000389398 LMOD2Q6P5Q4 547 aa9.86□□□□□ -0.83
VWA3A-202ENST00000389398 AK7Q96M32 723 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms