RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 RRP1P56182 461 aaKnown RBP17.02■□□□□ 0.32
TRAPPC9-201ENST00000389328 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.32
TRAPPC9-201ENST00000389328 LRRC9Q6ZRR7 1453 aa17.02■□□□□ 0.31
TRAPPC9-201ENST00000389328 CCDC7Q96M83 1385 aa17.01■□□□□ 0.31
TRAPPC9-201ENST00000389328 USP35Q9P2H5 1018 aa17.01■□□□□ 0.31
TRAPPC9-201ENST00000389328 KIF7Q2M1P5 1343 aa17.01■□□□□ 0.31
TRAPPC9-201ENST00000389328 TNNT2P45379 298 aaPredicted RBP17■□□□□ 0.31
TRAPPC9-201ENST00000389328 ST20-MTHFSA0A0A6YYL1 179 aa16.99■□□□□ 0.31
TRAPPC9-201ENST00000389328 TMF1P82094 1093 aa16.99■□□□□ 0.31
TRAPPC9-201ENST00000389328 NLRP13Q86W25 1043 aa16.99■□□□□ 0.31
TRAPPC9-201ENST00000389328 SENP3Q9H4L4 574 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC9-201ENST00000389328 SLC24A1O60721 1099 aa16.99■□□□□ 0.31
TRAPPC9-201ENST00000389328 CNTLNQ9NXG0 1405 aa16.98■□□□□ 0.31
TRAPPC9-201ENST00000389328 ANO8Q9HCE9 1232 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC9-201ENST00000389328 UACAQ9BZF9 1416 aa16.97■□□□□ 0.31
TRAPPC9-201ENST00000389328 GSE1Q14687 1217 aa16.97■□□□□ 0.31
TRAPPC9-201ENST00000389328 IL27Q8NEV9 243 aa16.97■□□□□ 0.31
TRAPPC9-201ENST00000389328 CDCA8Q53HL2 280 aa16.96■□□□□ 0.31
TRAPPC9-201ENST00000389328 FTSJ3Q8IY81 847 aaKnown RBP16.96■□□□□ 0.31
TRAPPC9-201ENST00000389328 GZF1Q9H116 711 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC9-201ENST00000389328 FGD6Q6ZV73 1430 aa16.96■□□□□ 0.31
TRAPPC9-201ENST00000389328 CRBNQ96SW2 442 aa16.95■□□□□ 0.3
TRAPPC9-201ENST00000389328 ROCK2O75116 1388 aaKnown RBP16.95■□□□□ 0.3
TRAPPC9-201ENST00000389328 NUP155O75694 1391 aa16.95■□□□□ 0.3
TRAPPC9-201ENST00000389328 PDE3BQ13370 1112 aa16.95■□□□□ 0.3
TRAPPC9-201ENST00000389328 MYBBP1AQ9BQG0 1328 aaKnown RBP16.94■□□□□ 0.3
TRAPPC9-201ENST00000389328 AKNAQ7Z591 1439 aa16.94■□□□□ 0.3
TRAPPC9-201ENST00000389328 PRXQ9BXM0 1461 aa16.94■□□□□ 0.3
TRAPPC9-201ENST00000389328 NCLP19338 710 aaKnown RBP16.93■□□□□ 0.3
TRAPPC9-201ENST00000389328 USP47Q96K76 1375 aa16.93■□□□□ 0.3
TRAPPC9-201ENST00000389328 L1TD1Q5T7N2 865 aaKnown RBP16.91■□□□□ 0.3
TRAPPC9-201ENST00000389328 KIF15Q9NS87 1388 aa16.91■□□□□ 0.3
TRAPPC9-201ENST00000389328 ARID4BQ4LE39 1312 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC9-201ENST00000389328 ERICH3Q5RHP9 1530 aa16.89■□□□□ 0.29
TRAPPC9-201ENST00000389328 GOLGA6L22H0YM25 854 aa16.89■□□□□ 0.29
TRAPPC9-201ENST00000389328 MS4A1P11836 297 aa16.88■□□□□ 0.29
TRAPPC9-201ENST00000389328 GOLGA2Q08379 1002 aa16.88■□□□□ 0.29
TRAPPC9-201ENST00000389328 CCDC146Q8IYE0 955 aa16.88■□□□□ 0.29
TRAPPC9-201ENST00000389328 CADPSQ9ULU8 1353 aa16.87■□□□□ 0.29
TRAPPC9-201ENST00000389328 CFAP53Q96M91 514 aa16.86■□□□□ 0.29
TRAPPC9-201ENST00000389328 FAM161AQ3B820 660 aa16.86■□□□□ 0.29
TRAPPC9-201ENST00000389328 NBPF8Q3BBV2 869 aa16.86■□□□□ 0.29
TRAPPC9-201ENST00000389328 NFKBIBQ15653 356 aa16.84■□□□□ 0.29
TRAPPC9-201ENST00000389328 BRPF3Q9ULD4 1205 aa16.84■□□□□ 0.29
TRAPPC9-201ENST00000389328 PNNQ9H307 717 aaKnown RBP16.84■□□□□ 0.29
TRAPPC9-201ENST00000389328 MYH16Q9H6N6 1097 aa16.84■□□□□ 0.29
TRAPPC9-201ENST00000389328 HSP90AB1P08238 724 aaKnown RBP16.84■□□□□ 0.29
TRAPPC9-201ENST00000389328 CDCA7LQ96GN5 454 aa16.84■□□□□ 0.29
TRAPPC9-201ENST00000389328 CENPQQ7L2Z9 268 aaPredicted RBP16.83■□□□□ 0.29
TRAPPC9-201ENST00000389328 PANK3Q9H999 370 aa16.83■□□□□ 0.29
TRAPPC9-201ENST00000389328 C11orf95C9JLR9 678 aaPredicted RBP16.83■□□□□ 0.28
TRAPPC9-201ENST00000389328 MYOM3Q5VTT5 1437 aa16.83■□□□□ 0.28
TRAPPC9-201ENST00000389328 HSCBQ8IWL3 235 aa16.82■□□□□ 0.28
TRAPPC9-201ENST00000389328 ZNF644Q9H582 1327 aaPredicted RBP16.82■□□□□ 0.28
TRAPPC9-201ENST00000389328 ANKRD30AQ9BXX3 1397 aa16.82■□□□□ 0.28
TRAPPC9-201ENST00000389328 CLUAP1Q96AJ1 413 aa16.81■□□□□ 0.28
TRAPPC9-201ENST00000389328 U2SURPO15042 1029 aaKnown RBP16.78■□□□□ 0.28
TRAPPC9-201ENST00000389328 FGD5Q6ZNL6 1462 aa16.78■□□□□ 0.28
TRAPPC9-201ENST00000389328 GOLGA6L3A6NEY3 463 aa16.78■□□□□ 0.28
TRAPPC9-201ENST00000389328 TPRNQ4KMQ1 711 aa16.78■□□□□ 0.28
TRAPPC9-201ENST00000389328 TIAM1Q13009 1591 aa16.77■□□□□ 0.28
TRAPPC9-201ENST00000389328 PNISRQ8TF01 805 aaKnown RBP16.77■□□□□ 0.28
TRAPPC9-201ENST00000389328 HNRNPMP52272 730 aaKnown RBP eCLIP16.77■□□□□ 0.271e-6■■■■■ 32.1
TRAPPC9-201ENST00000389328 MFAP1P55081 439 aaKnown RBP16.76■□□□□ 0.27
TRAPPC9-201ENST00000389328 BACH2Q9BYV9 841 aa16.76■□□□□ 0.27
TRAPPC9-201ENST00000389328 NCOA2Q15596 1464 aa16.76■□□□□ 0.27
TRAPPC9-201ENST00000389328 MORC1Q86VD1 984 aa16.76■□□□□ 0.27
TRAPPC9-201ENST00000389328 CASKIN1Q8WXD9 1431 aa16.75■□□□□ 0.27
TRAPPC9-201ENST00000389328 MAPK8IP3Q9UPT6 1336 aa16.75■□□□□ 0.27
TRAPPC9-201ENST00000389328 PTMAP06454 111 aaKnown RBP16.75■□□□□ 0.27
TRAPPC9-201ENST00000389328 STAG3Q9UJ98 1225 aa16.75■□□□□ 0.27
TRAPPC9-201ENST00000389328 HFM1A2PYH4 1435 aa16.74■□□□□ 0.27
TRAPPC9-201ENST00000389328 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
TRAPPC9-201ENST00000389328 RAD54L2Q9Y4B4 1467 aa16.74■□□□□ 0.27
TRAPPC9-201ENST00000389328 SMG6Q86US8 1419 aaKnown RBP16.73■□□□□ 0.27
TRAPPC9-201ENST00000389328 RSPH6AQ9H0K4 717 aa16.73■□□□□ 0.27
TRAPPC9-201ENST00000389328 RWDD1Q9H446 243 aaPredicted RBP16.73■□□□□ 0.27
TRAPPC9-201ENST00000389328 SKAP1Q86WV1 359 aa16.73■□□□□ 0.27
TRAPPC9-201ENST00000389328 COG6Q9Y2V7 657 aa16.72■□□□□ 0.27
TRAPPC9-201ENST00000389328 PRKCSHP14314 528 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC9-201ENST00000389328 BCL2L13Q9BXK5 485 aa16.72■□□□□ 0.27
TRAPPC9-201ENST00000389328 CENPJQ9HC77 1338 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC9-201ENST00000389328 FRAT2O75474 233 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC9-201ENST00000389328 DNTTIP2Q5QJE6 756 aaKnown RBP16.72■□□□□ 0.27
TRAPPC9-201ENST00000389328 MAPKBP1O60336 1514 aa16.72■□□□□ 0.27
TRAPPC9-201ENST00000389328 CFTRP13569 1480 aa16.71■□□□□ 0.27
TRAPPC9-201ENST00000389328 APAF1O14727 1248 aa16.7■□□□□ 0.26
TRAPPC9-201ENST00000389328 RRP7AQ9Y3A4 280 aaKnown RBP16.7■□□□□ 0.26
TRAPPC9-201ENST00000389328 PMFBP1Q8TBY8 1022 aa16.7■□□□□ 0.26
TRAPPC9-201ENST00000389328 NAIPQ13075 1403 aa16.68■□□□□ 0.26
TRAPPC9-201ENST00000389328 CUX1P39880 1505 aa16.68■□□□□ 0.26
TRAPPC9-201ENST00000389328 ITPRIPQ8IWB1 547 aa16.68■□□□□ 0.26
TRAPPC9-201ENST00000389328 FOXD4L1Q9NU39 408 aa16.68■□□□□ 0.26
TRAPPC9-201ENST00000389328 BRD4O60885 1362 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC9-201ENST00000389328 U2AF1L5P0DN76 240 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC9-201ENST00000389328 MSNP26038 577 aaKnown RBP16.67■□□□□ 0.26
TRAPPC9-201ENST00000389328 U2AF1Q01081 240 aaKnown RBP eCLIP16.67■□□□□ 0.26
TRAPPC9-201ENST00000389328 FYCO1Q9BQS8 1478 aa16.67■□□□□ 0.26
TRAPPC9-201ENST00000389328 FANCD2Q9BXW9 1451 aa16.66■□□□□ 0.26
TRAPPC9-201ENST00000389328 ADAMTS8Q9UP79 889 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms