RNA–Protein interactions for RNA: ENST00000388789.4

TTC41P-201, Transcript of tetratricopeptide repeat domain 41, pseudogene, humanhuman

TSL 1 (best)

Gene TTC41P, Length 1,372 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41P-201ENST00000388789 PRKAR2AP13861 404 aaKnown RBP12.36□□□□□ -0.43
TTC41P-201ENST00000388789 GRIN2AQ12879 1464 aa12.36□□□□□ -0.43
TTC41P-201ENST00000388789 CYB5RLQ6IPT4 315 aa12.35□□□□□ -0.43
TTC41P-201ENST00000388789 CCDC18Q5T9S5 1454 aa12.34□□□□□ -0.43
TTC41P-201ENST00000388789 MTUS2Q5JR59 1369 aa12.34□□□□□ -0.43
TTC41P-201ENST00000388789 CLASP1Q7Z460 1538 aa12.33□□□□□ -0.43
TTC41P-201ENST00000388789 HECW1Q76N89 1606 aa12.33□□□□□ -0.44
TTC41P-201ENST00000388789 GABBR2O75899 941 aa12.32□□□□□ -0.44
TTC41P-201ENST00000388789 LRRIQ1Q96JM4 1722 aa12.32□□□□□ -0.44
TTC41P-201ENST00000388789 DHX57Q6P158 1386 aaKnown RBP12.32□□□□□ -0.44
TTC41P-201ENST00000388789 C19orf67A6NJJ6 358 aa12.31□□□□□ -0.44
TTC41P-201ENST00000388789 EHBP1L1Q8N3D4 1523 aa12.31□□□□□ -0.44
TTC41P-201ENST00000388789 KIAA0556O60303 1618 aa12.3□□□□□ -0.44
TTC41P-201ENST00000388789 FAM50AQ14320 339 aaKnown RBP12.3□□□□□ -0.44
TTC41P-201ENST00000388789 SUPT6HQ7KZ85 1726 aaKnown RBP12.3□□□□□ -0.44
TTC41P-201ENST00000388789 DISP1Q96F81 1524 aa12.29□□□□□ -0.44
TTC41P-201ENST00000388789 SETD5Q9C0A6 1442 aa12.29□□□□□ -0.44
TTC41P-201ENST00000388789 ITGAEP38570 1179 aa12.29□□□□□ -0.44
TTC41P-201ENST00000388789 FGD6Q6ZV73 1430 aa12.28□□□□□ -0.44
TTC41P-201ENST00000388789 EPRSP07814 1512 aaKnown RBP12.27□□□□□ -0.44
TTC41P-201ENST00000388789 NCOA2Q15596 1464 aa12.27□□□□□ -0.44
TTC41P-201ENST00000388789 CLEC11AQ9Y240 323 aa12.27□□□□□ -0.45
TTC41P-201ENST00000388789 NUP160Q12769 1436 aa12.26□□□□□ -0.45
TTC41P-201ENST00000388789 RAB3GAP2Q9H2M9 1393 aa12.26□□□□□ -0.45
TTC41P-201ENST00000388789 SPDYE2BA6NHP3 402 aa12.26□□□□□ -0.45
TTC41P-201ENST00000388789 SPDYE6P0CI01 402 aa12.26□□□□□ -0.45
TTC41P-201ENST00000388789 SPDYE2Q495Y8 402 aa12.26□□□□□ -0.45
TTC41P-201ENST00000388789 CEP170Q5SW79 1584 aa12.26□□□□□ -0.45
TTC41P-201ENST00000388789 MYOM3Q5VTT5 1437 aa12.25□□□□□ -0.45
TTC41P-201ENST00000388789 PLSCR2Q9NRY7 297 aa12.24□□□□□ -0.45
TTC41P-201ENST00000388789 ZNF316A6NFI3 1004 aaPredicted RBP12.23□□□□□ -0.45
TTC41P-201ENST00000388789 SPDYE1Q8NFV5 336 aaPredicted RBP12.23□□□□□ -0.45
TTC41P-201ENST00000388789 CARMIL2Q6F5E8 1435 aa12.23□□□□□ -0.45
TTC41P-201ENST00000388789 MAGI3Q5TCQ9 1506 aa12.23□□□□□ -0.45
TTC41P-201ENST00000388789 RAPGEF6Q8TEU7 1601 aa12.22□□□□□ -0.45
TTC41P-201ENST00000388789 JPH4Q96JJ6 628 aa12.21□□□□□ -0.45
TTC41P-201ENST00000388789 TCOF1Q13428 1488 aaKnown RBP12.2□□□□□ -0.46
TTC41P-201ENST00000388789 CDK13Q14004 1512 aaKnown RBP12.19□□□□□ -0.46
TTC41P-201ENST00000388789 PTPN23Q9H3S7 1636 aa12.19□□□□□ -0.46
TTC41P-201ENST00000388789 CDK11AQ9UQ88 783 aaPredicted RBP12.19□□□□□ -0.46
TTC41P-201ENST00000388789 MIA2Q96PC5 1412 aa12.19□□□□□ -0.46
TTC41P-201ENST00000388789 NUP153P49790 1475 aaKnown RBP12.18□□□□□ -0.46
TTC41P-201ENST00000388789 ERCC6L2Q5T890 1561 aa12.18□□□□□ -0.46
TTC41P-201ENST00000388789 DIEXFQ68CQ4 756 aaKnown RBP12.18□□□□□ -0.46
TTC41P-201ENST00000388789 SHROOM2Q13796 1616 aa12.16□□□□□ -0.46
TTC41P-201ENST00000388789 MKRN4PQ13434 485 aaPredicted RBP12.16□□□□□ -0.46
TTC41P-201ENST00000388789 HFM1A2PYH4 1435 aa12.15□□□□□ -0.46
TTC41P-201ENST00000388789 MAPKBP1O60336 1514 aa12.14□□□□□ -0.47
TTC41P-201ENST00000388789 PTPRKQ15262 1439 aa12.14□□□□□ -0.47
TTC41P-201ENST00000388789 PRG4Q92954 1404 aaPredicted RBP12.13□□□□□ -0.47
TTC41P-201ENST00000388789 TIMELESSQ9UNS1 1208 aa12.12□□□□□ -0.47
TTC41P-201ENST00000388789 TROQ12816 1431 aaPredicted RBP12.11□□□□□ -0.47
TTC41P-201ENST00000388789 NAIPQ13075 1403 aa12.11□□□□□ -0.47
TTC41P-201ENST00000388789 AKNAQ7Z591 1439 aa12.11□□□□□ -0.47
TTC41P-201ENST00000388789 PLB1Q6P1J6 1458 aa12.11□□□□□ -0.47
TTC41P-201ENST00000388789 ACIN1Q9UKV3 1341 aaKnown RBP12.11□□□□□ -0.47
TTC41P-201ENST00000388789 ABCA8O94911 1581 aa12.11□□□□□ -0.47
TTC41P-201ENST00000388789 ARID3CA6NKF2 412 aa12.1□□□□□ -0.47
TTC41P-201ENST00000388789 ADCY10Q96PN6 1610 aa12.09□□□□□ -0.47
TTC41P-201ENST00000388789 UACAQ9BZF9 1416 aa12.09□□□□□ -0.47
TTC41P-201ENST00000388789 GCC2Q8IWJ2 1684 aa12.07□□□□□ -0.48
TTC41P-201ENST00000388789 CHADLQ6NUI6 762 aa12.06□□□□□ -0.48
TTC41P-201ENST00000388789 PTPRGP23470 1445 aa12.06□□□□□ -0.48
TTC41P-201ENST00000388789 ITSN2Q9NZM3 1697 aa12.06□□□□□ -0.48
TTC41P-201ENST00000388789 ROCK1Q13464 1354 aa12.05□□□□□ -0.48
TTC41P-201ENST00000388789 PLEKHD1A6NEE1 506 aa12.05□□□□□ -0.48
TTC41P-201ENST00000388789 ATP10BO94823 1461 aa12.05□□□□□ -0.48
TTC41P-201ENST00000388789 DNMT1P26358 1616 aaKnown RBP12.04□□□□□ -0.48
TTC41P-201ENST00000388789 DAPK1P53355 1430 aa12.04□□□□□ -0.48
TTC41P-201ENST00000388789 GPATCH8Q9UKJ3 1502 aaKnown RBP12.02□□□□□ -0.48
TTC41P-201ENST00000388789 POTEIP0CG38 1075 aa12.02□□□□□ -0.49
TTC41P-201ENST00000388789 SIN3AQ96ST3 1273 aa12.02□□□□□ -0.49
TTC41P-201ENST00000388789 ZNF692Q9BU19 519 aaPredicted RBP12.02□□□□□ -0.49
TTC41P-201ENST00000388789 RRP7BPQ9NSQ0 103 aa12.02□□□□□ -0.49
TTC41P-201ENST00000388789 CFDP1Q9UEE9 299 aaPredicted RBP12.02□□□□□ -0.49
TTC41P-201ENST00000388789 CHIC2Q9UKJ5 165 aa12.02□□□□□ -0.49
TTC41P-201ENST00000388789 ABCC5O15440 1437 aa12.01□□□□□ -0.49
TTC41P-201ENST00000388789 NEUROD1Q13562 356 aa12.01□□□□□ -0.49
TTC41P-201ENST00000388789 KIF14Q15058 1648 aa12□□□□□ -0.49
TTC41P-201ENST00000388789 CAMSAP2Q08AD1 1489 aa11.99□□□□□ -0.49
TTC41P-201ENST00000388789 SSUH2Q9Y2M2 353 aa11.99□□□□□ -0.49
TTC41P-201ENST00000388789 ZNF644Q9H582 1327 aaPredicted RBP11.98□□□□□ -0.49
TTC41P-201ENST00000388789 ABCC10Q5T3U5 1492 aa11.98□□□□□ -0.49
TTC41P-201ENST00000388789 NPM1P06748 294 aaKnown RBP eCLIP11.98□□□□□ -0.49
TTC41P-201ENST00000388789 PPP1R15AO75807 674 aaPredicted RBP11.97□□□□□ -0.49
TTC41P-201ENST00000388789 TRIM52Q96A61 297 aa11.96□□□□□ -0.49
TTC41P-201ENST00000388789 CDC42BPAQ5VT25 1732 aa11.96□□□□□ -0.49
TTC41P-201ENST00000388789 ADGBQ8N7X0 1667 aa11.96□□□□□ -0.5
TTC41P-201ENST00000388789 KDM6BO15054 1643 aa11.95□□□□□ -0.5
TTC41P-201ENST00000388789 PRR29P0C7W0 189 aa11.95□□□□□ -0.5
TTC41P-201ENST00000388789 TONSLQ96HA7 1378 aa11.95□□□□□ -0.5
TTC41P-201ENST00000388789 ADGRL2O95490 1459 aa11.95□□□□□ -0.5
TTC41P-201ENST00000388789 MPHOSPH9Q99550 1183 aa11.94□□□□□ -0.5
TTC41P-201ENST00000388789 CROCC2H7BZ55 1655 aa11.94□□□□□ -0.5
TTC41P-201ENST00000388789 ABCC2Q92887 1545 aa11.94□□□□□ -0.5
TTC41P-201ENST00000388789 CD44P16070 742 aaKnown RBP11.93□□□□□ -0.5
TTC41P-201ENST00000388789 NCOA1Q15788 1441 aa11.93□□□□□ -0.5
TTC41P-201ENST00000388789 MIER1Q8N108 512 aa11.92□□□□□ -0.5
TTC41P-201ENST00000388789 ZNF777Q9ULD5 760 aaPredicted RBP11.92□□□□□ -0.5
TTC41P-201ENST00000388789 SHANK2Q9UPX8 1470 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms