RNA–Protein interactions for RNA: ENST00000383331.4

HCG27-201, Transcript of HLA complex group 27, humanhuman

TSL 1 (best) BASIC

Gene HCG27, Length 1,720 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-201ENST00000383331 ITSN2Q9NZM3 1697 aa22.2■■□□□ 1.14
HCG27-201ENST00000383331 ITGAEP38570 1179 aa22.2■■□□□ 1.14
HCG27-201ENST00000383331 WDR7Q9Y4E6 1490 aa22.18■■□□□ 1.14
HCG27-201ENST00000383331 DHX57Q6P158 1386 aaKnown RBP22.17■■□□□ 1.14
HCG27-201ENST00000383331 MAP3K4Q9Y6R4 1608 aa22.16■■□□□ 1.14
HCG27-201ENST00000383331 CLSPNQ9HAW4 1339 aa22.15■■□□□ 1.14
HCG27-201ENST00000383331 SETD5Q9C0A6 1442 aa22.13■■□□□ 1.13
HCG27-201ENST00000383331 RAB3GAP2Q9H2M9 1393 aa22.12■■□□□ 1.13
HCG27-201ENST00000383331 GPATCH8Q9UKJ3 1502 aaKnown RBP22.12■■□□□ 1.13
HCG27-201ENST00000383331 KCNH8Q96L42 1107 aa22.11■■□□□ 1.13
HCG27-201ENST00000383331 TEX14Q8IWB6 1497 aa22.1■■□□□ 1.13
HCG27-201ENST00000383331 CDC42BPAQ5VT25 1732 aa22.09■■□□□ 1.13
HCG27-201ENST00000383331 COL17A1Q9UMD9 1497 aaPredicted RBP22.07■■□□□ 1.12
HCG27-201ENST00000383331 PTPRKQ15262 1439 aa22.04■■□□□ 1.12
HCG27-201ENST00000383331 CD109Q6YHK3 1445 aa22.04■■□□□ 1.12
HCG27-201ENST00000383331 CFDP1Q9UEE9 299 aaPredicted RBP22.04■■□□□ 1.12
HCG27-201ENST00000383331 PREX2Q70Z35 1606 aa22.02■■□□□ 1.12
HCG27-201ENST00000383331 KDM4FA0A1W2PPD8 638 aa22.02■■□□□ 1.12
HCG27-201ENST00000383331 DNMT1P26358 1616 aaKnown RBP22.01■■□□□ 1.11
HCG27-201ENST00000383331 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.01■■□□□ 1.11
HCG27-201ENST00000383331 CAMSAP2Q08AD1 1489 aa22.01■■□□□ 1.11
HCG27-201ENST00000383331 AKNAQ7Z591 1439 aa21.99■■□□□ 1.11
HCG27-201ENST00000383331 MYO5CQ9NQX4 1742 aa21.98■■□□□ 1.11
HCG27-201ENST00000383331 TTC37Q6PGP7 1564 aa21.98■■□□□ 1.11
HCG27-201ENST00000383331 HFM1A2PYH4 1435 aa21.98■■□□□ 1.11
HCG27-201ENST00000383331 CDC42BPBQ9Y5S2 1711 aa21.98■■□□□ 1.11
HCG27-201ENST00000383331 DAPK1P53355 1430 aa21.96■■□□□ 1.11
HCG27-201ENST00000383331 ABCC5O15440 1437 aa21.93■■□□□ 1.1
HCG27-201ENST00000383331 ZNF644Q9H582 1327 aaPredicted RBP21.93■■□□□ 1.1
HCG27-201ENST00000383331 ROCK1Q13464 1354 aa21.93■■□□□ 1.1
HCG27-201ENST00000383331 NAIPQ13075 1403 aa21.92■■□□□ 1.1
HCG27-201ENST00000383331 ARAP3Q8WWN8 1544 aa21.92■■□□□ 1.1
HCG27-201ENST00000383331 GCC2Q8IWJ2 1684 aa21.91■■□□□ 1.1
HCG27-201ENST00000383331 CROCC2H7BZ55 1655 aa21.91■■□□□ 1.1
HCG27-201ENST00000383331 ARHGEF5Q12774 1597 aa21.9■■□□□ 1.1
HCG27-201ENST00000383331 PLCH2O75038 1416 aa21.9■■□□□ 1.1
HCG27-201ENST00000383331 ABCA9Q8IUA7 1624 aa21.89■■□□□ 1.1
HCG27-201ENST00000383331 ARHGAP5Q13017 1502 aa21.89■■□□□ 1.09
HCG27-201ENST00000383331 PLEKHH2Q8IVE3 1493 aa21.88■■□□□ 1.09
HCG27-201ENST00000383331 SAMD9LQ8IVG5 1584 aa21.88■■□□□ 1.09
HCG27-201ENST00000383331 ZNF777Q9ULD5 760 aaPredicted RBP21.88■■□□□ 1.09
HCG27-201ENST00000383331 ADGRL1O94910 1474 aa21.87■■□□□ 1.09
HCG27-201ENST00000383331 SHANK2Q9UPX8 1470 aa21.87■■□□□ 1.09
HCG27-201ENST00000383331 ADGBQ8N7X0 1667 aa21.87■■□□□ 1.09
HCG27-201ENST00000383331 RSPH4AQ5TD94 716 aa21.86■■□□□ 1.09
HCG27-201ENST00000383331 ACIN1Q9UKV3 1341 aaKnown RBP21.86■■□□□ 1.09
HCG27-201ENST00000383331 ADGRL2O95490 1459 aa21.85■■□□□ 1.09
HCG27-201ENST00000383331 KIAA1107Q9UPP5 1409 aa21.84■■□□□ 1.09
HCG27-201ENST00000383331 MBD5Q9P267 1494 aa21.83■■□□□ 1.09
HCG27-201ENST00000383331 EFCAB2Q5VUJ9 269 aa21.81■■□□□ 1.08
HCG27-201ENST00000383331 CHIC2Q9UKJ5 165 aa21.81■■□□□ 1.08
HCG27-201ENST00000383331 CCDC141Q6ZP82 1450 aa21.81■■□□□ 1.08
HCG27-201ENST00000383331 NCOA1Q15788 1441 aa21.78■■□□□ 1.08
HCG27-201ENST00000383331 RRP7BPQ9NSQ0 103 aa21.78■■□□□ 1.08
HCG27-201ENST00000383331 ANKRD30AQ9BXX3 1397 aa21.77■■□□□ 1.08
HCG27-201ENST00000383331 SYCP2Q9BX26 1530 aa21.77■■□□□ 1.08
HCG27-201ENST00000383331 C9orf84Q5VXU9 1444 aa21.76■■□□□ 1.07
HCG27-201ENST00000383331 MAST1Q9Y2H9 1570 aa21.76■■□□□ 1.07
HCG27-201ENST00000383331 TSPY4P0CV99 314 aa21.76■■□□□ 1.07
HCG27-201ENST00000383331 TSPY10P0CW01 314 aa21.76■■□□□ 1.07
HCG27-201ENST00000383331 ABCC1P33527 1531 aa21.76■■□□□ 1.07
HCG27-201ENST00000383331 NEO1Q92859 1461 aa21.75■■□□□ 1.07
HCG27-201ENST00000383331 ZNF316A6NFI3 1004 aaPredicted RBP21.75■■□□□ 1.07
HCG27-201ENST00000383331 RAPGEF3O95398 923 aa21.75■■□□□ 1.07
HCG27-201ENST00000383331 HNRNPMP52272 730 aaKnown RBP eCLIP21.75■■□□□ 1.07
HCG27-201ENST00000383331 FANCAO15360 1455 aa21.72■■□□□ 1.07
HCG27-201ENST00000383331 CFAP74Q9C0B2 1584 aa21.7■■□□□ 1.06
HCG27-201ENST00000383331 ARHGEF12Q9NZN5 1544 aa21.68■■□□□ 1.06
HCG27-201ENST00000383331 TIMELESSQ9UNS1 1208 aa21.67■■□□□ 1.06
HCG27-201ENST00000383331 PLXNC1O60486 1568 aa21.67■■□□□ 1.06
HCG27-201ENST00000383331 FRMPD1Q5SYB0 1578 aa21.66■■□□□ 1.06
HCG27-201ENST00000383331 SIN3AQ96ST3 1273 aa21.66■■□□□ 1.06
HCG27-201ENST00000383331 ANKRD50Q9ULJ7 1429 aa21.64■■□□□ 1.05
HCG27-201ENST00000383331 KIF15Q9NS87 1388 aa21.62■■□□□ 1.05
HCG27-201ENST00000383331 DENND4BO75064 1496 aaPredicted RBP21.62■■□□□ 1.05
HCG27-201ENST00000383331 RTEL1-TNFRSF6BF6WH68 1400 aa21.62■■□□□ 1.05
HCG27-201ENST00000383331 TRAPPC8Q9Y2L5 1435 aa21.61■■□□□ 1.05
HCG27-201ENST00000383331 DIEXFQ68CQ4 756 aaKnown RBP21.6■■□□□ 1.05
HCG27-201ENST00000383331 NEUROD1Q13562 356 aa21.59■■□□□ 1.05
HCG27-201ENST00000383331 TRIM52Q96A61 297 aa21.58■■□□□ 1.05
HCG27-201ENST00000383331 RICTORQ6R327 1708 aa21.57■■□□□ 1.04
HCG27-201ENST00000383331 SCAPERQ9BY12 1400 aa21.57■■□□□ 1.04
HCG27-201ENST00000383331 DUOX2Q9NRD8 1548 aa21.56■■□□□ 1.04
HCG27-201ENST00000383331 ARID4BQ4LE39 1312 aaPredicted RBP21.56■■□□□ 1.04
HCG27-201ENST00000383331 MPHOSPH9Q99550 1183 aa21.55■■□□□ 1.04
HCG27-201ENST00000383331 SPAG9O60271 1321 aaKnown RBP21.54■■□□□ 1.04
HCG27-201ENST00000383331 ZFYVE16Q7Z3T8 1539 aa21.54■■□□□ 1.04
HCG27-201ENST00000383331 ARHGEF40Q8TER5 1519 aa21.54■■□□□ 1.04
HCG27-201ENST00000383331 INO80Q9ULG1 1556 aaPredicted RBP21.53■■□□□ 1.04
HCG27-201ENST00000383331 ZNF518AQ6AHZ1 1483 aa21.53■■□□□ 1.04
HCG27-201ENST00000383331 KDM5DQ9BY66 1539 aa21.53■■□□□ 1.04
HCG27-201ENST00000383331 HECW2Q9P2P5 1572 aa21.53■■□□□ 1.04
HCG27-201ENST00000383331 ERBINQ96RT1 1412 aa21.52■■□□□ 1.04
HCG27-201ENST00000383331 ATP7AQ04656 1500 aa21.51■■□□□ 1.03
HCG27-201ENST00000383331 AFAP1Q8N556 730 aa21.5■■□□□ 1.03
HCG27-201ENST00000383331 ADAMTSL3P82987 1691 aa21.5■■□□□ 1.03
HCG27-201ENST00000383331 PPP1R15AO75807 674 aaPredicted RBP21.49■■□□□ 1.03
HCG27-201ENST00000383331 PZPP20742 1482 aa21.49■■□□□ 1.03
HCG27-201ENST00000383331 ZMYM4Q5VZL5 1548 aa21.49■■□□□ 1.03
HCG27-201ENST00000383331 KDM5CP41229 1560 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms