RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 GLI2P10070 1586 aa21.68■■□□□ 1.06
SYNGR1-204ENST00000381535 ZCCHC11Q5TAX3 1644 aaKnown RBP21.66■■□□□ 1.06
SYNGR1-204ENST00000381535 ZNF644Q9H582 1327 aaPredicted RBP21.64■■□□□ 1.05
SYNGR1-204ENST00000381535 ZNF777Q9ULD5 760 aaPredicted RBP21.64■■□□□ 1.05
SYNGR1-204ENST00000381535 SETD5Q9C0A6 1442 aa21.62■■□□□ 1.05
SYNGR1-204ENST00000381535 PTPRKQ15262 1439 aa21.61■■□□□ 1.05
SYNGR1-204ENST00000381535 ITSN2Q9NZM3 1697 aa21.59■■□□□ 1.05
SYNGR1-204ENST00000381535 WDR7Q9Y4E6 1490 aa21.58■■□□□ 1.05
SYNGR1-204ENST00000381535 CHIC2Q9UKJ5 165 aa21.57■■□□□ 1.04
SYNGR1-204ENST00000381535 KDM6BO15054 1643 aa21.56■■□□□ 1.04
SYNGR1-204ENST00000381535 RAB3GAP2Q9H2M9 1393 aa21.55■■□□□ 1.04
SYNGR1-204ENST00000381535 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.55■■□□□ 1.04
SYNGR1-204ENST00000381535 CAMSAP2Q08AD1 1489 aa21.54■■□□□ 1.04
SYNGR1-204ENST00000381535 CDC42BPAQ5VT25 1732 aa21.54■■□□□ 1.04
SYNGR1-204ENST00000381535 ABCC5O15440 1437 aa21.53■■□□□ 1.04
SYNGR1-204ENST00000381535 COL17A1Q9UMD9 1497 aaPredicted RBP21.52■■□□□ 1.04
SYNGR1-204ENST00000381535 TSPOAP1O95153 1857 aa21.52■■□□□ 1.04
SYNGR1-204ENST00000381535 RRP7BPQ9NSQ0 103 aa21.51■■□□□ 1.03
SYNGR1-204ENST00000381535 DAPK1P53355 1430 aa21.51■■□□□ 1.03
SYNGR1-204ENST00000381535 TEX14Q8IWB6 1497 aa21.5■■□□□ 1.03
SYNGR1-204ENST00000381535 PPRC1Q5VV67 1664 aaKnown RBP21.5■■□□□ 1.03
SYNGR1-204ENST00000381535 MAP3K4Q9Y6R4 1608 aa21.49■■□□□ 1.03
SYNGR1-204ENST00000381535 PLCH2O75038 1416 aa21.48■■□□□ 1.03
SYNGR1-204ENST00000381535 CD109Q6YHK3 1445 aa21.48■■□□□ 1.03
SYNGR1-204ENST00000381535 KDM4FA0A1W2PPD8 638 aa21.48■■□□□ 1.03
SYNGR1-204ENST00000381535 HNRNPMP52272 730 aaKnown RBP eCLIP21.48■■□□□ 1.03
SYNGR1-204ENST00000381535 EFCAB2Q5VUJ9 269 aa21.48■■□□□ 1.03
SYNGR1-204ENST00000381535 TTC37Q6PGP7 1564 aa21.48■■□□□ 1.03
SYNGR1-204ENST00000381535 HFM1A2PYH4 1435 aa21.47■■□□□ 1.03
SYNGR1-204ENST00000381535 DHX57Q6P158 1386 aaKnown RBP21.47■■□□□ 1.03
SYNGR1-204ENST00000381535 RSPH4AQ5TD94 716 aa21.46■■□□□ 1.03
SYNGR1-204ENST00000381535 DNMT1P26358 1616 aaKnown RBP21.46■■□□□ 1.03
SYNGR1-204ENST00000381535 NAIPQ13075 1403 aa21.46■■□□□ 1.03
SYNGR1-204ENST00000381535 PREX2Q70Z35 1606 aa21.45■■□□□ 1.02
SYNGR1-204ENST00000381535 CDC42BPBQ9Y5S2 1711 aa21.45■■□□□ 1.02
SYNGR1-204ENST00000381535 ARHGAP5Q13017 1502 aa21.45■■□□□ 1.02
SYNGR1-204ENST00000381535 TSPY4P0CV99 314 aa21.44■■□□□ 1.02
SYNGR1-204ENST00000381535 TSPY10P0CW01 314 aa21.44■■□□□ 1.02
SYNGR1-204ENST00000381535 ROCK1Q13464 1354 aa21.44■■□□□ 1.02
SYNGR1-204ENST00000381535 AKNAQ7Z591 1439 aa21.44■■□□□ 1.02
SYNGR1-204ENST00000381535 MYO5CQ9NQX4 1742 aa21.41■■□□□ 1.02
SYNGR1-204ENST00000381535 CLSPNQ9HAW4 1339 aa21.4■■□□□ 1.02
SYNGR1-204ENST00000381535 SAMD9LQ8IVG5 1584 aa21.39■■□□□ 1.01
SYNGR1-204ENST00000381535 MBD5Q9P267 1494 aa21.39■■□□□ 1.01
SYNGR1-204ENST00000381535 PLEKHH2Q8IVE3 1493 aa21.38■■□□□ 1.01
SYNGR1-204ENST00000381535 KIAA1107Q9UPP5 1409 aa21.38■■□□□ 1.01
SYNGR1-204ENST00000381535 ARHGEF5Q12774 1597 aa21.36■■□□□ 1.01
SYNGR1-204ENST00000381535 ANKRD30AQ9BXX3 1397 aa21.36■■□□□ 1.01
SYNGR1-204ENST00000381535 ABCA9Q8IUA7 1624 aa21.35■■□□□ 1.01
SYNGR1-204ENST00000381535 NCOA1Q15788 1441 aa21.35■■□□□ 1.01
SYNGR1-204ENST00000381535 ARAP3Q8WWN8 1544 aa21.34■■□□□ 1.01
SYNGR1-204ENST00000381535 ACIN1Q9UKV3 1341 aaKnown RBP21.34■■□□□ 1.01
SYNGR1-204ENST00000381535 C9orf84Q5VXU9 1444 aa21.33■■□□□ 1.01
SYNGR1-204ENST00000381535 ADGRL2O95490 1459 aa21.32■■□□□ 1
SYNGR1-204ENST00000381535 CCDC141Q6ZP82 1450 aa21.32■■□□□ 1
SYNGR1-204ENST00000381535 TRIM52Q96A61 297 aa21.32■■□□□ 1
SYNGR1-204ENST00000381535 SHANK2Q9UPX8 1470 aa21.32■■□□□ 1
SYNGR1-204ENST00000381535 GCC2Q8IWJ2 1684 aa21.3■■□□□ 1
SYNGR1-204ENST00000381535 SYCP2Q9BX26 1530 aa21.29■■□□□ 1
SYNGR1-204ENST00000381535 ARHGEF12Q9NZN5 1544 aa21.29■■□□□ 1
SYNGR1-204ENST00000381535 CROCC2H7BZ55 1655 aa21.28■■□□□ 1
SYNGR1-204ENST00000381535 FANCAO15360 1455 aa21.27■■□□□ 1
SYNGR1-204ENST00000381535 ADGBQ8N7X0 1667 aa21.27■■□□□ 1
SYNGR1-204ENST00000381535 TRAPPC8Q9Y2L5 1435 aa21.23■□□□□ 0.99
SYNGR1-204ENST00000381535 AFAP1Q8N556 730 aa21.23■□□□□ 0.99
SYNGR1-204ENST00000381535 ABCC1P33527 1531 aa21.23■□□□□ 0.99
SYNGR1-204ENST00000381535 KIF15Q9NS87 1388 aa21.22■□□□□ 0.99
SYNGR1-204ENST00000381535 ANKRD50Q9ULJ7 1429 aa21.21■□□□□ 0.99
SYNGR1-204ENST00000381535 ADGRL1O94910 1474 aa21.21■□□□□ 0.99
SYNGR1-204ENST00000381535 NEO1Q92859 1461 aa21.21■□□□□ 0.99
SYNGR1-204ENST00000381535 MPHOSPH9Q99550 1183 aa21.21■□□□□ 0.99
SYNGR1-204ENST00000381535 SPAG9O60271 1321 aaKnown RBP21.21■□□□□ 0.99
SYNGR1-204ENST00000381535 SCAPERQ9BY12 1400 aa21.21■□□□□ 0.99
SYNGR1-204ENST00000381535 MAST1Q9Y2H9 1570 aa21.2■□□□□ 0.98
SYNGR1-204ENST00000381535 RAPGEF3O95398 923 aa21.2■□□□□ 0.98
SYNGR1-204ENST00000381535 SIN3AQ96ST3 1273 aa21.17■□□□□ 0.98
SYNGR1-204ENST00000381535 RTEL1-TNFRSF6BF6WH68 1400 aa21.14■□□□□ 0.98
SYNGR1-204ENST00000381535 NEUROD1Q13562 356 aa21.14■□□□□ 0.97
SYNGR1-204ENST00000381535 MYT1LQ9UL68 1186 aa21.14■□□□□ 0.97
SYNGR1-204ENST00000381535 SLC4A1APQ9BWU0 796 aaKnown RBP21.13■□□□□ 0.97
SYNGR1-204ENST00000381535 CFAP74Q9C0B2 1584 aa21.11■□□□□ 0.97
SYNGR1-204ENST00000381535 NUP155O75694 1391 aa21.09■□□□□ 0.97
SYNGR1-204ENST00000381535 PLXNC1O60486 1568 aa21.08■□□□□ 0.97
SYNGR1-204ENST00000381535 TIMELESSQ9UNS1 1208 aa21.07■□□□□ 0.96
SYNGR1-204ENST00000381535 DUOX2Q9NRD8 1548 aa21.07■□□□□ 0.96
SYNGR1-204ENST00000381535 DENND4BO75064 1496 aaPredicted RBP21.07■□□□□ 0.96
SYNGR1-204ENST00000381535 FOXD1Q16676 465 aa21.06■□□□□ 0.96
SYNGR1-204ENST00000381535 SENP3Q9H4L4 574 aaPredicted RBP21.06■□□□□ 0.96
SYNGR1-204ENST00000381535 PZPP20742 1482 aa21.05■□□□□ 0.96
SYNGR1-204ENST00000381535 ZNF518AQ6AHZ1 1483 aa21.04■□□□□ 0.96
SYNGR1-204ENST00000381535 PKD2Q13563 968 aa21.03■□□□□ 0.96
SYNGR1-204ENST00000381535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.03■□□□□ 0.96
SYNGR1-204ENST00000381535 ATP7AQ04656 1500 aa21.02■□□□□ 0.96
SYNGR1-204ENST00000381535 ZFYVE16Q7Z3T8 1539 aa21.02■□□□□ 0.96
SYNGR1-204ENST00000381535 POGZQ7Z3K3 1410 aa21.02■□□□□ 0.96
SYNGR1-204ENST00000381535 ERBINQ96RT1 1412 aa21.02■□□□□ 0.96
SYNGR1-204ENST00000381535 ANKRD30BQ9BXX2 1392 aa21■□□□□ 0.95
SYNGR1-204ENST00000381535 FRMPD1Q5SYB0 1578 aa21■□□□□ 0.95
SYNGR1-204ENST00000381535 DHX29Q7Z478 1369 aaKnown RBP20.99■□□□□ 0.95
SYNGR1-204ENST00000381535 INO80Q9ULG1 1556 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms