RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 PLEKHG5O94827 1062 aa7.61□□□□□ -1.19
GEN1-202ENST00000381254 ABCC10Q5T3U5 1492 aa7.61□□□□□ -1.19
GEN1-202ENST00000381254 RAPGEF3O95398 923 aa7.6□□□□□ -1.19
GEN1-202ENST00000381254 RTL5Q5HYW3 569 aaPredicted RBP7.6□□□□□ -1.19
GEN1-202ENST00000381254 DENND4BO75064 1496 aaPredicted RBP7.6□□□□□ -1.19
GEN1-202ENST00000381254 ERCC6L2Q5T890 1561 aa7.6□□□□□ -1.19
GEN1-202ENST00000381254 FAM50AQ14320 339 aaKnown RBP7.6□□□□□ -1.19
GEN1-202ENST00000381254 ANP32CO43423 234 aa7.59□□□□□ -1.19
GEN1-202ENST00000381254 ZNF772Q68DY9 489 aaPredicted RBP7.59□□□□□ -1.19
GEN1-202ENST00000381254 TRIM52Q96A61 297 aa7.59□□□□□ -1.19
GEN1-202ENST00000381254 CCNB3Q8WWL7 1395 aa7.59□□□□□ -1.2
GEN1-202ENST00000381254 RAPGEF2Q9Y4G8 1499 aa7.58□□□□□ -1.2
GEN1-202ENST00000381254 CHD1O14646 1710 aa7.57□□□□□ -1.2
GEN1-202ENST00000381254 ZBTB7CA1YPR0 619 aa7.57□□□□□ -1.2
GEN1-202ENST00000381254 KIF3BO15066 747 aa7.56□□□□□ -1.2
GEN1-202ENST00000381254 RSPH4AQ5TD94 716 aa7.56□□□□□ -1.2
GEN1-202ENST00000381254 ABCA10Q8WWZ4 1543 aa7.56□□□□□ -1.2
GEN1-202ENST00000381254 EIF5BO60841 1220 aaKnown RBP7.56□□□□□ -1.2
GEN1-202ENST00000381254 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.56□□□□□ -1.2
GEN1-202ENST00000381254 HMGB2P26583 209 aaKnown RBP7.56□□□□□ -1.2
GEN1-202ENST00000381254 SLC24A1O60721 1099 aa7.54□□□□□ -1.2
GEN1-202ENST00000381254 KDM4FA0A1W2PPD8 638 aa7.54□□□□□ -1.2
GEN1-202ENST00000381254 ERICH3Q5RHP9 1530 aa7.54□□□□□ -1.2
GEN1-202ENST00000381254 KLHL34Q8N239 644 aa7.54□□□□□ -1.2
GEN1-202ENST00000381254 LOC105371045A0A1W2PR82 267 aa7.53□□□□□ -1.2
GEN1-202ENST00000381254 ITGAEP38570 1179 aa7.53□□□□□ -1.2
GEN1-202ENST00000381254 WDR7Q9Y4E6 1490 aa7.53□□□□□ -1.2
GEN1-202ENST00000381254 CNTLNQ9NXG0 1405 aa7.53□□□□□ -1.2
GEN1-202ENST00000381254 NPM2Q86SE8 214 aaKnown RBP7.53□□□□□ -1.2
GEN1-202ENST00000381254 CEP170Q5SW79 1584 aa7.53□□□□□ -1.2
GEN1-202ENST00000381254 ABCC2Q92887 1545 aa7.52□□□□□ -1.2
GEN1-202ENST00000381254 NBPF8Q3BBV2 869 aa7.52□□□□□ -1.21
GEN1-202ENST00000381254 NBPF14Q5TI25 921 aa7.52□□□□□ -1.21
GEN1-202ENST00000381254 PRDM2Q13029 1718 aa7.52□□□□□ -1.21
GEN1-202ENST00000381254 TXNDC2Q86VQ3 553 aa7.52□□□□□ -1.21
GEN1-202ENST00000381254 RXRBP28702 533 aa7.51□□□□□ -1.21
GEN1-202ENST00000381254 TSPOAP1O95153 1857 aa7.51□□□□□ -1.21
GEN1-202ENST00000381254 PTPRKQ15262 1439 aa7.51□□□□□ -1.21
GEN1-202ENST00000381254 CEBPAP49715 358 aaPredicted RBP7.51□□□□□ -1.21
GEN1-202ENST00000381254 NEFMP07197 916 aa7.5□□□□□ -1.21
GEN1-202ENST00000381254 MSH6P52701 1360 aa7.5□□□□□ -1.21
GEN1-202ENST00000381254 SCAPERQ9BY12 1400 aa7.5□□□□□ -1.21
GEN1-202ENST00000381254 EVA1CP58658 441 aa7.49□□□□□ -1.21
GEN1-202ENST00000381254 FMN1Q68DA7 1419 aa7.49□□□□□ -1.21
GEN1-202ENST00000381254 HNRNPMP52272 730 aaKnown RBP eCLIP7.49□□□□□ -1.21
GEN1-202ENST00000381254 NCKAP5LQ9HCH0 1330 aa7.48□□□□□ -1.21
GEN1-202ENST00000381254 NUP160Q12769 1436 aa7.47□□□□□ -1.21
GEN1-202ENST00000381254 ARHGAP5Q13017 1502 aa7.47□□□□□ -1.21
GEN1-202ENST00000381254 ERICH6BQ5W0A0 696 aa7.46□□□□□ -1.21
GEN1-202ENST00000381254 ANP32EQ9BTT0 268 aa7.46□□□□□ -1.21
GEN1-202ENST00000381254 YEATS2Q9ULM3 1422 aa7.46□□□□□ -1.21
GEN1-202ENST00000381254 BAG6P46379 1132 aa7.46□□□□□ -1.22
GEN1-202ENST00000381254 RBM33Q96EV2 1170 aaKnown RBP7.46□□□□□ -1.22
GEN1-202ENST00000381254 FAM135AQ9P2D6 1515 aa7.46□□□□□ -1.22
GEN1-202ENST00000381254 MSH5O43196 834 aa7.45□□□□□ -1.22
GEN1-202ENST00000381254 PSME1Q06323 249 aa7.45□□□□□ -1.22
GEN1-202ENST00000381254 TONSLQ96HA7 1378 aa7.45□□□□□ -1.22
GEN1-202ENST00000381254 POGKQ9P215 609 aa7.45□□□□□ -1.22
GEN1-202ENST00000381254 CUX1P39880 1505 aa7.45□□□□□ -1.22
GEN1-202ENST00000381254 IQGAP2Q13576 1575 aa7.45□□□□□ -1.22
GEN1-202ENST00000381254 EFCAB5A4FU69 1503 aa7.44□□□□□ -1.22
GEN1-202ENST00000381254 CCDC18Q5T9S5 1454 aa7.44□□□□□ -1.22
GEN1-202ENST00000381254 C16orf71Q8IYS4 520 aaPredicted RBP7.44□□□□□ -1.22
GEN1-202ENST00000381254 IGF1RP08069 1367 aa7.44□□□□□ -1.22
GEN1-202ENST00000381254 NPHP1O15259 732 aa7.43□□□□□ -1.22
GEN1-202ENST00000381254 PLEKHH2Q8IVE3 1493 aa7.43□□□□□ -1.22
GEN1-202ENST00000381254 CADPS2Q86UW7 1296 aa7.43□□□□□ -1.22
GEN1-202ENST00000381254 ADAMTS12P58397 1594 aa7.43□□□□□ -1.22
GEN1-202ENST00000381254 C9orf84Q5VXU9 1444 aa7.43□□□□□ -1.22
GEN1-202ENST00000381254 CUL7Q14999 1698 aa7.43□□□□□ -1.22
GEN1-202ENST00000381254 CSB-PGBD3P0DP91 1061 aa7.43□□□□□ -1.22
GEN1-202ENST00000381254 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.43□□□□□ -1.22
GEN1-202ENST00000381254 ANP32AP39687 249 aaKnown RBP7.42□□□□□ -1.22
GEN1-202ENST00000381254 CFAP43Q8NDM7 1665 aa7.42□□□□□ -1.22
GEN1-202ENST00000381254 ZBTB47Q9UFB7 747 aaPredicted RBP7.42□□□□□ -1.22
GEN1-202ENST00000381254 C8orf37Q96NL8 207 aa7.42□□□□□ -1.22
GEN1-202ENST00000381254 NEO1Q92859 1461 aa7.41□□□□□ -1.22
GEN1-202ENST00000381254 PBRM1Q86U86 1689 aa7.41□□□□□ -1.22
GEN1-202ENST00000381254 PDE3BQ13370 1112 aa7.41□□□□□ -1.22
GEN1-202ENST00000381254 MAPKBP1O60336 1514 aa7.4□□□□□ -1.22
GEN1-202ENST00000381254 PAK3O75914 559 aaPredicted RBP7.4□□□□□ -1.22
GEN1-202ENST00000381254 ADAMTS2O95450 1211 aa7.4□□□□□ -1.22
GEN1-202ENST00000381254 TNRQ92752 1358 aa7.4□□□□□ -1.22
GEN1-202ENST00000381254 CLASP1Q7Z460 1538 aa7.4□□□□□ -1.22
GEN1-202ENST00000381254 HSPA1LP34931 641 aa7.4□□□□□ -1.23
GEN1-202ENST00000381254 ATP10AO60312 1499 aa7.4□□□□□ -1.23
GEN1-202ENST00000381254 CDCA8Q53HL2 280 aa7.39□□□□□ -1.23
GEN1-202ENST00000381254 CFAP74Q9C0B2 1584 aa7.39□□□□□ -1.23
GEN1-202ENST00000381254 EPRSP07814 1512 aaKnown RBP7.39□□□□□ -1.23
GEN1-202ENST00000381254 CEP162Q5TB80 1403 aa7.39□□□□□ -1.23
GEN1-202ENST00000381254 AFAP1Q8N556 730 aa7.39□□□□□ -1.23
GEN1-202ENST00000381254 ZFYVE16Q7Z3T8 1539 aa7.39□□□□□ -1.23
GEN1-202ENST00000381254 PTPRMP28827 1452 aa7.39□□□□□ -1.23
GEN1-202ENST00000381254 LRRC59Q96AG4 307 aaKnown RBP7.38□□□□□ -1.23
GEN1-202ENST00000381254 NEUROD1Q13562 356 aa7.38□□□□□ -1.23
GEN1-202ENST00000381254 TMX4Q9H1E5 349 aaPredicted RBP7.38□□□□□ -1.23
GEN1-202ENST00000381254 TRAPPC8Q9Y2L5 1435 aa7.38□□□□□ -1.23
GEN1-202ENST00000381254 GTF3C3Q9Y5Q9 886 aa7.38□□□□□ -1.23
GEN1-202ENST00000381254 LRPPRCP42704 1394 aaKnown RBP7.38□□□□□ -1.23
GEN1-202ENST00000381254 CHIC2Q9UKJ5 165 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms